Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c116' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 5017557 --chroot fedora-rawhide-x86_64 --detached Version: 0.61 PID: 24363 Logging PID: 24364 Task: {'appstream': False, 'background': True, 'build_id': 5017557, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'e4dd40cd7f46e4933ec79a22630c596d1ce32d6e', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/djdelorie/make-4.4/openms', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'openms', 'package_version': '2.8.0-0.3', 'project_dirname': 'make-4.4', 'project_name': 'make-4.4', 'project_owner': 'djdelorie', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/djdelorie/make-4.4/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'djdelorie/make-4.4--djdelorie', 'source_json': {}, 'source_type': None, 'submitter': 'djdelorie', 'tags': [], 'task_id': '5017557-fedora-rawhide-x86_64', 'timeout': 108000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/djdelorie/make-4.4/openms /var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/djdelorie/make-4.4/openms', '/var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms'... Running: git checkout e4dd40cd7f46e4933ec79a22630c596d1ce32d6e cmd: ['git', 'checkout', 'e4dd40cd7f46e4933ec79a22630c596d1ce32d6e'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms rc: 0 stdout: stderr: Note: switching to 'e4dd40cd7f46e4933ec79a22630c596d1ce32d6e'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at e4dd40c automatic import of openms Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading INIFileEditor.png INFO: Calling: curl -H Pragma: -o INIFileEditor.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/djdelorie/make-4.4/openms/INIFileEditor.png/md5/3e88489b48077034550f4446e1cb78a5/INIFileEditor.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 7036 100 7036 0 0 59720 0 --:--:-- --:--:-- --:--:-- 60136 INFO: Reading stdout from command: md5sum INIFileEditor.png INFO: Downloading OpenMS-2.8.0-src.tar.gz INFO: Calling: curl -H Pragma: -o OpenMS-2.8.0-src.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/djdelorie/make-4.4/openms/OpenMS-2.8.0-src.tar.gz/md5/1b4e6924959c4d06aedeaf05adcc64b7/OpenMS-2.8.0-src.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 283M 100 283M 0 0 18.0M 0 0:00:15 0:00:15 --:--:-- 23.3M INFO: Reading stdout from command: md5sum OpenMS-2.8.0-src.tar.gz INFO: Downloading TOPPAS.png INFO: Calling: curl -H Pragma: -o TOPPAS.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/djdelorie/make-4.4/openms/TOPPAS.png/md5/05d43107a9fe75b3cdbe2e95a6c11f5f/TOPPAS.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 5997 100 5997 0 0 96013 0 --:--:-- --:--:-- --:--:-- 96725 INFO: Reading stdout from command: md5sum TOPPAS.png INFO: Downloading TOPPView.png INFO: Calling: curl -H Pragma: -o TOPPView.png --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/djdelorie/make-4.4/openms/TOPPView.png/md5/676662e3b7e6257d71b520f8a9f1cecc/TOPPView.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8884 100 8884 0 0 169k 0 --:--:-- --:--:-- --:--:-- 170k INFO: Reading stdout from command: md5sum TOPPView.png Running (timeout=108000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms/openms.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1668432429.168711 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.3 starting (python version = 3.10.4, NVR = mock-3.3-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms/openms.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1668432429.168711/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.3 INFO: Mock Version: 3.3 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 50 MB/s | 37 MB 00:00 fedora 30 MB/s | 65 MB 00:02 Last metadata expiration check: 0:00:08 ago on Mon Nov 14 13:27:19 2022. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf noarch 4.14.0-1.fc38 fedora 480 k dnf-plugins-core noarch 4.3.1-1.fc38 fedora 34 k Installing dependencies: alternatives x86_64 1.21-1.fc38 copr_base 38 k audit-libs x86_64 3.0.9-1.fc38 copr_base 116 k basesystem noarch 11-14.fc37 fedora 7.0 k bash x86_64 5.2.2-2.fc38 copr_base 1.8 M bzip2-libs x86_64 1.0.8-12.fc38 copr_base 42 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils x86_64 9.1-8.fc38 copr_base 1.1 M coreutils-common x86_64 9.1-8.fc38 copr_base 2.0 M crypto-policies noarch 20221110-1.git87a75f4.fc38 fedora 90 k curl x86_64 7.86.0-2.fc38 copr_base 335 k cyrus-sasl-lib x86_64 2.1.28-8.fc38 copr_base 794 k dbus-libs x86_64 1:1.14.4-1.fc38 copr_base 156 k dnf-data noarch 4.14.0-1.fc38 fedora 43 k elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k elfutils-libs x86_64 0.188-3.fc38 fedora 257 k expat x86_64 2.4.8-2.fc38 copr_base 110 k fedora-gpg-keys noarch 38-0.3 fedora 125 k fedora-release noarch 38-0.4 fedora 11 k fedora-release-common noarch 38-0.4 fedora 22 k fedora-release-identity-basic noarch 38-0.4 fedora 12 k fedora-repos noarch 38-0.3 fedora 10 k fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k file-libs x86_64 5.42-4.fc38 copr_base 676 k filesystem x86_64 3.18-2.fc37 fedora 1.1 M findutils x86_64 1:4.9.0-2.fc38 copr_base 483 k gawk x86_64 5.1.1-4.fc38 copr_base 1.0 M gdbm-libs x86_64 1:1.23-2.fc38 copr_base 56 k glib2 x86_64 2.74.1-2.fc38 fedora 2.7 M glibc x86_64 2.36.9000-13.fc38 fedora 2.1 M glibc-common x86_64 2.36.9000-13.fc38 fedora 304 k glibc-minimal-langpack x86_64 2.36.9000-13.fc38 fedora 25 k gmp x86_64 1:6.2.1-3.fc38 copr_base 316 k gnupg2 x86_64 2.3.8-1.fc38 copr_base 2.5 M gnutls x86_64 3.7.8-9.fc38 fedora 1.1 M gpgme x86_64 1.17.0-4.fc38 copr_base 211 k grep x86_64 3.8-1.fc38 copr_base 282 k ima-evm-utils x86_64 1.4-6.fc38 copr_base 63 k json-c x86_64 0.16-3.fc38 fedora 41 k keyutils-libs x86_64 1.6.1-5.fc38 copr_base 32 k krb5-libs x86_64 1.19.2-11.fc38.1 copr_base 724 k libacl x86_64 2.3.1-4.fc38 copr_base 24 k libarchive x86_64 3.6.1-2.fc38 copr_base 397 k libassuan x86_64 2.5.5-5.fc38 copr_base 67 k libattr x86_64 2.5.1-5.fc38 copr_base 18 k libb2 x86_64 0.98.1-7.fc38 copr_base 25 k libblkid x86_64 2.38.1-2.fc38 copr_base 107 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc38 copr_base 67 k libcap-ng x86_64 0.8.3-3.fc38 copr_base 33 k libcom_err x86_64 1.46.5-3.fc38 copr_base 26 k libcomps x86_64 0.1.18-4.fc38 copr_base 77 k libcurl x86_64 7.86.0-2.fc38 copr_base 305 k libdnf x86_64 0.68.0-1.fc38 fedora 673 k libevent x86_64 2.1.12-7.fc38 copr_base 259 k libffi x86_64 3.4.4-1.fc38 fedora 38 k libfsverity x86_64 1.4-8.fc38 copr_base 20 k libgcc x86_64 12.2.1-3.fc38 fedora 108 k libgcrypt x86_64 1.10.1-5.fc38 fedora 513 k libgomp x86_64 12.2.1-3.fc38 fedora 295 k libgpg-error x86_64 1.46-1.fc38 copr_base 222 k libidn2 x86_64 2.3.4-1.fc38 copr_base 154 k libksba x86_64 1.6.2-1.fc38 copr_base 158 k libmodulemd x86_64 2.14.0-4.fc37 fedora 234 k libmount x86_64 2.38.1-2.fc38 copr_base 136 k libnghttp2 x86_64 1.50.0-1.fc38 copr_base 75 k libnsl2 x86_64 2.0.0-4.fc38 copr_base 31 k libpsl x86_64 0.21.1-6.fc38 copr_base 64 k librepo x86_64 1.14.4-1.fc38 fedora 94 k libreport-filesystem noarch 2.17.6-1.fc38 fedora 14 k libselinux x86_64 3.4-5.fc38 copr_base 86 k libsemanage x86_64 3.4-5.fc38 copr_base 120 k libsepol x86_64 3.4-3.fc38 copr_base 322 k libsigsegv x86_64 2.14-3.fc38 copr_base 27 k libsmartcols x86_64 2.38.1-2.fc38 copr_base 65 k libsolv x86_64 0.7.22-3.fc37 fedora 405 k libssh x86_64 0.10.4-2.fc38 fedora 209 k libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k libstdc++ x86_64 12.2.1-3.fc38 fedora 799 k libtasn1 x86_64 4.18.0-3.fc38 copr_base 75 k libtirpc x86_64 1.3.3-0.fc38 copr_base 94 k libunistring x86_64 1.0-2.fc38 copr_base 549 k libuuid x86_64 2.38.1-2.fc38 copr_base 28 k libverto x86_64 0.3.2-4.fc38 copr_base 21 k libxcrypt x86_64 4.4.30-3.fc38 fedora 118 k libxml2 x86_64 2.10.3-2.fc38 fedora 705 k libyaml x86_64 0.2.5-8.fc38 copr_base 60 k libzstd x86_64 1.5.2-3.fc38 copr_base 295 k lua-libs x86_64 5.4.4-6.fc38 copr_base 132 k lz4-libs x86_64 1.9.3-5.fc38 copr_base 71 k mpdecimal x86_64 2.5.1-4.fc38 copr_base 102 k mpfr x86_64 4.1.0-10.fc38 copr_base 331 k ncurses-base noarch 6.3-3.20220501.fc38 copr_base 62 k ncurses-libs x86_64 6.3-3.20220501.fc38 copr_base 329 k nettle x86_64 3.8-2.fc38 copr_base 414 k npth x86_64 1.6-10.fc38 copr_base 25 k openldap x86_64 2.6.3-1.fc38 copr_base 254 k openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M p11-kit x86_64 0.24.1-3.fc37 fedora 376 k p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k pcre2 x86_64 10.40-1.fc38.1 copr_base 237 k pcre2-syntax noarch 10.40-1.fc38.1 copr_base 143 k popt x86_64 1.19-1.fc38 copr_base 59 k publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k python-pip-wheel noarch 22.2.2-2.fc38 fedora 1.4 M python-setuptools-wheel noarch 65.5.1-1.fc38 fedora 715 k python3 x86_64 3.11.0-1.fc38 copr_base 28 k python3-dateutil noarch 1:2.8.2-4.fc38 copr_base 350 k python3-dbus x86_64 1.3.2-1.fc38 copr_base 147 k python3-distro noarch 1.8.0-1.fc38 fedora 49 k python3-dnf noarch 4.14.0-1.fc38 fedora 607 k python3-dnf-plugins-core noarch 4.3.1-1.fc38 fedora 277 k python3-gpg x86_64 1.17.0-4.fc38 copr_base 280 k python3-hawkey x86_64 0.68.0-1.fc38 fedora 108 k python3-libcomps x86_64 0.1.18-4.fc38 copr_base 48 k python3-libdnf x86_64 0.68.0-1.fc38 fedora 818 k python3-libs x86_64 3.11.0-1.fc38 copr_base 9.3 M python3-rpm x86_64 4.18.0-6.fc38 fedora 94 k python3-six noarch 1.16.0-8.fc37 fedora 42 k readline x86_64 8.2-2.fc38 copr_base 211 k rpm x86_64 4.18.0-6.fc38 fedora 572 k rpm-build-libs x86_64 4.18.0-6.fc38 fedora 94 k rpm-libs x86_64 4.18.0-6.fc38 fedora 320 k rpm-sign-libs x86_64 4.18.0-6.fc38 fedora 27 k sed x86_64 4.8-11.fc38 copr_base 297 k setup noarch 2.14.2-1.fc38 copr_base 145 k shadow-utils x86_64 2:4.13-1.fc38 fedora 1.3 M sqlite-libs x86_64 3.39.4-1.fc38 copr_base 659 k systemd-libs x86_64 252.1-588.fc38 fedora 631 k tpm2-tss x86_64 3.2.0-3.fc38 copr_base 596 k tzdata noarch 2022f-1.fc38 copr_base 431 k xz-libs x86_64 5.2.7-1.fc38 copr_base 93 k zchunk-libs x86_64 1.2.3-1.fc38 fedora 51 k zlib x86_64 1.2.12-5.fc38 copr_base 94 k Transaction Summary ================================================================================ Install 136 Packages Total download size: 55 M Installed size: 196 M Downloading Packages: (1/136): alternatives-1.21-1.fc38.x86_64.rpm 970 kB/s | 38 kB 00:00 (2/136): bzip2-libs-1.0.8-12.fc38.x86_64.rpm 3.7 MB/s | 42 kB 00:00 (3/136): audit-libs-3.0.9-1.fc38.x86_64.rpm 2.0 MB/s | 116 kB 00:00 (4/136): bash-5.2.2-2.fc38.x86_64.rpm 14 MB/s | 1.8 MB 00:00 (5/136): coreutils-9.1-8.fc38.x86_64.rpm 14 MB/s | 1.1 MB 00:00 (6/136): coreutils-common-9.1-8.fc38.x86_64.rpm 19 MB/s | 2.0 MB 00:00 (7/136): curl-7.86.0-2.fc38.x86_64.rpm 8.9 MB/s | 335 kB 00:00 (8/136): cyrus-sasl-lib-2.1.28-8.fc38.x86_64.rp 16 MB/s | 794 kB 00:00 (9/136): dbus-libs-1.14.4-1.fc38.x86_64.rpm 8.6 MB/s | 156 kB 00:00 (10/136): expat-2.4.8-2.fc38.x86_64.rpm 6.2 MB/s | 110 kB 00:00 (11/136): file-libs-5.42-4.fc38.x86_64.rpm 32 MB/s | 676 kB 00:00 (12/136): findutils-4.9.0-2.fc38.x86_64.rpm 15 MB/s | 483 kB 00:00 (13/136): gawk-5.1.1-4.fc38.x86_64.rpm 27 MB/s | 1.0 MB 00:00 (14/136): gdbm-libs-1.23-2.fc38.x86_64.rpm 2.5 MB/s | 56 kB 00:00 (15/136): gmp-6.2.1-3.fc38.x86_64.rpm 26 MB/s | 316 kB 00:00 (16/136): gnupg2-2.3.8-1.fc38.x86_64.rpm 57 MB/s | 2.5 MB 00:00 (17/136): gpgme-1.17.0-4.fc38.x86_64.rpm 4.5 MB/s | 211 kB 00:00 (18/136): grep-3.8-1.fc38.x86_64.rpm 6.7 MB/s | 282 kB 00:00 (19/136): ima-evm-utils-1.4-6.fc38.x86_64.rpm 7.0 MB/s | 63 kB 00:00 (20/136): keyutils-libs-1.6.1-5.fc38.x86_64.rpm 3.5 MB/s | 32 kB 00:00 (21/136): krb5-libs-1.19.2-11.fc38.1.x86_64.rpm 43 MB/s | 724 kB 00:00 (22/136): libacl-2.3.1-4.fc38.x86_64.rpm 2.3 MB/s | 24 kB 00:00 (23/136): libarchive-3.6.1-2.fc38.x86_64.rpm 28 MB/s | 397 kB 00:00 (24/136): libassuan-2.5.5-5.fc38.x86_64.rpm 7.4 MB/s | 67 kB 00:00 (25/136): libattr-2.5.1-5.fc38.x86_64.rpm 2.2 MB/s | 18 kB 00:00 (26/136): libb2-0.98.1-7.fc38.x86_64.rpm 3.0 MB/s | 25 kB 00:00 (27/136): libblkid-2.38.1-2.fc38.x86_64.rpm 11 MB/s | 107 kB 00:00 (28/136): libcap-2.48-5.fc38.x86_64.rpm 7.1 MB/s | 67 kB 00:00 (29/136): libcap-ng-0.8.3-3.fc38.x86_64.rpm 3.8 MB/s | 33 kB 00:00 (30/136): libcom_err-1.46.5-3.fc38.x86_64.rpm 3.0 MB/s | 26 kB 00:00 (31/136): libcomps-0.1.18-4.fc38.x86_64.rpm 8.4 MB/s | 77 kB 00:00 (32/136): libcurl-7.86.0-2.fc38.x86_64.rpm 26 MB/s | 305 kB 00:00 (33/136): libevent-2.1.12-7.fc38.x86_64.rpm 23 MB/s | 259 kB 00:00 (34/136): libfsverity-1.4-8.fc38.x86_64.rpm 1.9 MB/s | 20 kB 00:00 (35/136): libgpg-error-1.46-1.fc38.x86_64.rpm 20 MB/s | 222 kB 00:00 (36/136): libidn2-2.3.4-1.fc38.x86_64.rpm 15 MB/s | 154 kB 00:00 (37/136): libksba-1.6.2-1.fc38.x86_64.rpm 14 MB/s | 158 kB 00:00 (38/136): libmount-2.38.1-2.fc38.x86_64.rpm 14 MB/s | 136 kB 00:00 (39/136): libnghttp2-1.50.0-1.fc38.x86_64.rpm 8.1 MB/s | 75 kB 00:00 (40/136): libnsl2-2.0.0-4.fc38.x86_64.rpm 3.4 MB/s | 31 kB 00:00 (41/136): libpsl-0.21.1-6.fc38.x86_64.rpm 7.0 MB/s | 64 kB 00:00 (42/136): libselinux-3.4-5.fc38.x86_64.rpm 9.4 MB/s | 86 kB 00:00 (43/136): libsemanage-3.4-5.fc38.x86_64.rpm 12 MB/s | 120 kB 00:00 (44/136): libsepol-3.4-3.fc38.x86_64.rpm 27 MB/s | 322 kB 00:00 (45/136): libsigsegv-2.14-3.fc38.x86_64.rpm 2.7 MB/s | 27 kB 00:00 (46/136): libsmartcols-2.38.1-2.fc38.x86_64.rpm 6.5 MB/s | 65 kB 00:00 (47/136): libtasn1-4.18.0-3.fc38.x86_64.rpm 8.0 MB/s | 75 kB 00:00 (48/136): libtirpc-1.3.3-0.fc38.x86_64.rpm 9.6 MB/s | 94 kB 00:00 (49/136): libunistring-1.0-2.fc38.x86_64.rpm 35 MB/s | 549 kB 00:00 (50/136): libuuid-2.38.1-2.fc38.x86_64.rpm 2.4 MB/s | 28 kB 00:00 (51/136): libverto-0.3.2-4.fc38.x86_64.rpm 1.9 MB/s | 21 kB 00:00 (52/136): libyaml-0.2.5-8.fc38.x86_64.rpm 6.6 MB/s | 60 kB 00:00 (53/136): libzstd-1.5.2-3.fc38.x86_64.rpm 24 MB/s | 295 kB 00:00 (54/136): lua-libs-5.4.4-6.fc38.x86_64.rpm 11 MB/s | 132 kB 00:00 (55/136): lz4-libs-1.9.3-5.fc38.x86_64.rpm 6.5 MB/s | 71 kB 00:00 (56/136): mpdecimal-2.5.1-4.fc38.x86_64.rpm 11 MB/s | 102 kB 00:00 (57/136): mpfr-4.1.0-10.fc38.x86_64.rpm 26 MB/s | 331 kB 00:00 (58/136): ncurses-base-6.3-3.20220501.fc38.noar 6.2 MB/s | 62 kB 00:00 (59/136): ncurses-libs-6.3-3.20220501.fc38.x86_ 26 MB/s | 329 kB 00:00 (60/136): nettle-3.8-2.fc38.x86_64.rpm 30 MB/s | 414 kB 00:00 (61/136): npth-1.6-10.fc38.x86_64.rpm 1.8 MB/s | 25 kB 00:00 (62/136): openldap-2.6.3-1.fc38.x86_64.rpm 22 MB/s | 254 kB 00:00 (63/136): pcre2-10.40-1.fc38.1.x86_64.rpm 21 MB/s | 237 kB 00:00 (64/136): pcre2-syntax-10.40-1.fc38.1.noarch.rp 12 MB/s | 143 kB 00:00 (65/136): popt-1.19-1.fc38.x86_64.rpm 6.7 MB/s | 59 kB 00:00 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22 MB/s | 55 MB 00:02 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-2.fc37.x86_64 1/1 Preparing : 1/1 Installing : libgcc-12.2.1-3.fc38.x86_64 1/136 Running scriptlet: libgcc-12.2.1-3.fc38.x86_64 1/136 Installing : crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/136 Running scriptlet: crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/136 Installing : tzdata-2022f-1.fc38.noarch 3/136 Installing : fedora-release-identity-basic-38-0.4.noarch 4/136 Installing : python-setuptools-wheel-65.5.1-1.fc38.noarch 5/136 Installing : publicsuffix-list-dafsa-20210518-5.fc37.noarch 6/136 Installing : libssh-config-0.10.4-2.fc38.noarch 7/136 Installing : libreport-filesystem-2.17.6-1.fc38.noarch 8/136 Installing : dnf-data-4.14.0-1.fc38.noarch 9/136 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-38-0.3.noarch 10/136 Installing : fedora-release-38-0.4.noarch 11/136 Installing : fedora-release-common-38-0.4.noarch 12/136 Installing : fedora-repos-rawhide-38-0.3.noarch 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libmodulemd-2.14.0-4.fc37.x86_64 101/136 Installing : libfsverity-1.4-8.fc38.x86_64 102/136 Installing : zchunk-libs-1.2.3-1.fc38.x86_64 103/136 Installing : libsolv-0.7.22-3.fc37.x86_64 104/136 Installing : libnsl2-2.0.0-4.fc38.x86_64 105/136 Installing : libssh-0.10.4-2.fc38.x86_64 106/136 Installing : rpm-build-libs-4.18.0-6.fc38.x86_64 107/136 Installing : python-pip-wheel-22.2.2-2.fc38.noarch 108/136 Installing : python3-3.11.0-1.fc38.x86_64 109/136 Installing : python3-libs-3.11.0-1.fc38.x86_64 110/136 Installing : python3-dbus-1.3.2-1.fc38.x86_64 111/136 Installing : python3-libcomps-0.1.18-4.fc38.x86_64 112/136 Installing : python3-distro-1.8.0-1.fc38.noarch 113/136 Installing : python3-six-1.16.0-8.fc37.noarch 114/136 Installing : python3-dateutil-1:2.8.2-4.fc38.noarch 115/136 Installing : libarchive-3.6.1-2.fc38.x86_64 116/136 Installing : libevent-2.1.12-7.fc38.x86_64 117/136 Installing : openldap-2.6.3-1.fc38.x86_64 118/136 Installing : libcurl-7.86.0-2.fc38.x86_64 119/136 Installing : gnupg2-2.3.8-1.fc38.x86_64 120/136 Installing : gpgme-1.17.0-4.fc38.x86_64 121/136 Installing : python3-gpg-1.17.0-4.fc38.x86_64 122/136 Installing : librepo-1.14.4-1.fc38.x86_64 123/136 Installing : libdnf-0.68.0-1.fc38.x86_64 124/136 Installing : python3-libdnf-0.68.0-1.fc38.x86_64 125/136 Installing : python3-hawkey-0.68.0-1.fc38.x86_64 126/136 Installing : curl-7.86.0-2.fc38.x86_64 127/136 Running scriptlet: tpm2-tss-3.2.0-3.fc38.x86_64 128/136 useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Installing : tpm2-tss-3.2.0-3.fc38.x86_64 128/136 Installing : ima-evm-utils-1.4-6.fc38.x86_64 129/136 Installing : rpm-sign-libs-4.18.0-6.fc38.x86_64 130/136 Installing : python3-rpm-4.18.0-6.fc38.x86_64 131/136 Installing : python3-dnf-4.14.0-1.fc38.noarch 132/136 Installing : python3-dnf-plugins-core-4.3.1-1.fc38.noarch 133/136 Installing : dnf-plugins-core-4.3.1-1.fc38.noarch 134/136 Installing : dnf-4.14.0-1.fc38.noarch 135/136 Running scriptlet: dnf-4.14.0-1.fc38.noarch 135/136 Running scriptlet: rpm-4.18.0-6.fc38.x86_64 136/136 Installing : rpm-4.18.0-6.fc38.x86_64 136/136 Running scriptlet: filesystem-3.18-2.fc37.x86_64 136/136 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 136/136 Running scriptlet: rpm-4.18.0-6.fc38.x86_64 136/136 Verifying : alternatives-1.21-1.fc38.x86_64 1/136 Verifying : audit-libs-3.0.9-1.fc38.x86_64 2/136 Verifying : bash-5.2.2-2.fc38.x86_64 3/136 Verifying : bzip2-libs-1.0.8-12.fc38.x86_64 4/136 Verifying : coreutils-9.1-8.fc38.x86_64 5/136 Verifying : coreutils-common-9.1-8.fc38.x86_64 6/136 Verifying : curl-7.86.0-2.fc38.x86_64 7/136 Verifying : cyrus-sasl-lib-2.1.28-8.fc38.x86_64 8/136 Verifying : dbus-libs-1:1.14.4-1.fc38.x86_64 9/136 Verifying : expat-2.4.8-2.fc38.x86_64 10/136 Verifying : file-libs-5.42-4.fc38.x86_64 11/136 Verifying : findutils-1:4.9.0-2.fc38.x86_64 12/136 Verifying : gawk-5.1.1-4.fc38.x86_64 13/136 Verifying : gdbm-libs-1:1.23-2.fc38.x86_64 14/136 Verifying : gmp-1:6.2.1-3.fc38.x86_64 15/136 Verifying : gnupg2-2.3.8-1.fc38.x86_64 16/136 Verifying : gpgme-1.17.0-4.fc38.x86_64 17/136 Verifying : grep-3.8-1.fc38.x86_64 18/136 Verifying : ima-evm-utils-1.4-6.fc38.x86_64 19/136 Verifying : keyutils-libs-1.6.1-5.fc38.x86_64 20/136 Verifying : krb5-libs-1.19.2-11.fc38.1.x86_64 21/136 Verifying : libacl-2.3.1-4.fc38.x86_64 22/136 Verifying : libarchive-3.6.1-2.fc38.x86_64 23/136 Verifying : libassuan-2.5.5-5.fc38.x86_64 24/136 Verifying : libattr-2.5.1-5.fc38.x86_64 25/136 Verifying : libb2-0.98.1-7.fc38.x86_64 26/136 Verifying : libblkid-2.38.1-2.fc38.x86_64 27/136 Verifying : libcap-2.48-5.fc38.x86_64 28/136 Verifying : libcap-ng-0.8.3-3.fc38.x86_64 29/136 Verifying : libcom_err-1.46.5-3.fc38.x86_64 30/136 Verifying : libcomps-0.1.18-4.fc38.x86_64 31/136 Verifying : libcurl-7.86.0-2.fc38.x86_64 32/136 Verifying : libevent-2.1.12-7.fc38.x86_64 33/136 Verifying : libfsverity-1.4-8.fc38.x86_64 34/136 Verifying : libgpg-error-1.46-1.fc38.x86_64 35/136 Verifying : libidn2-2.3.4-1.fc38.x86_64 36/136 Verifying : libksba-1.6.2-1.fc38.x86_64 37/136 Verifying : libmount-2.38.1-2.fc38.x86_64 38/136 Verifying : libnghttp2-1.50.0-1.fc38.x86_64 39/136 Verifying : libnsl2-2.0.0-4.fc38.x86_64 40/136 Verifying : libpsl-0.21.1-6.fc38.x86_64 41/136 Verifying : libselinux-3.4-5.fc38.x86_64 42/136 Verifying : libsemanage-3.4-5.fc38.x86_64 43/136 Verifying : libsepol-3.4-3.fc38.x86_64 44/136 Verifying : libsigsegv-2.14-3.fc38.x86_64 45/136 Verifying : libsmartcols-2.38.1-2.fc38.x86_64 46/136 Verifying : libtasn1-4.18.0-3.fc38.x86_64 47/136 Verifying : libtirpc-1.3.3-0.fc38.x86_64 48/136 Verifying : libunistring-1.0-2.fc38.x86_64 49/136 Verifying : libuuid-2.38.1-2.fc38.x86_64 50/136 Verifying : libverto-0.3.2-4.fc38.x86_64 51/136 Verifying : libyaml-0.2.5-8.fc38.x86_64 52/136 Verifying : libzstd-1.5.2-3.fc38.x86_64 53/136 Verifying : lua-libs-5.4.4-6.fc38.x86_64 54/136 Verifying : lz4-libs-1.9.3-5.fc38.x86_64 55/136 Verifying : mpdecimal-2.5.1-4.fc38.x86_64 56/136 Verifying : mpfr-4.1.0-10.fc38.x86_64 57/136 Verifying : ncurses-base-6.3-3.20220501.fc38.noarch 58/136 Verifying : ncurses-libs-6.3-3.20220501.fc38.x86_64 59/136 Verifying : nettle-3.8-2.fc38.x86_64 60/136 Verifying : npth-1.6-10.fc38.x86_64 61/136 Verifying : openldap-2.6.3-1.fc38.x86_64 62/136 Verifying : pcre2-10.40-1.fc38.1.x86_64 63/136 Verifying : pcre2-syntax-10.40-1.fc38.1.noarch 64/136 Verifying : popt-1.19-1.fc38.x86_64 65/136 Verifying : python3-3.11.0-1.fc38.x86_64 66/136 Verifying : python3-dateutil-1:2.8.2-4.fc38.noarch 67/136 Verifying : python3-dbus-1.3.2-1.fc38.x86_64 68/136 Verifying : python3-gpg-1.17.0-4.fc38.x86_64 69/136 Verifying : python3-libcomps-0.1.18-4.fc38.x86_64 70/136 Verifying : python3-libs-3.11.0-1.fc38.x86_64 71/136 Verifying : readline-8.2-2.fc38.x86_64 72/136 Verifying : sed-4.8-11.fc38.x86_64 73/136 Verifying : setup-2.14.2-1.fc38.noarch 74/136 Verifying : sqlite-libs-3.39.4-1.fc38.x86_64 75/136 Verifying : tpm2-tss-3.2.0-3.fc38.x86_64 76/136 Verifying : tzdata-2022f-1.fc38.noarch 77/136 Verifying : xz-libs-5.2.7-1.fc38.x86_64 78/136 Verifying : zlib-1.2.12-5.fc38.x86_64 79/136 Verifying : basesystem-11-14.fc37.noarch 80/136 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 81/136 Verifying : crypto-policies-20221110-1.git87a75f4.fc38.noarc 82/136 Verifying : dnf-4.14.0-1.fc38.noarch 83/136 Verifying : dnf-data-4.14.0-1.fc38.noarch 84/136 Verifying : dnf-plugins-core-4.3.1-1.fc38.noarch 85/136 Verifying : elfutils-default-yama-scope-0.188-3.fc38.noarch 86/136 Verifying : elfutils-libelf-0.188-3.fc38.x86_64 87/136 Verifying : elfutils-libs-0.188-3.fc38.x86_64 88/136 Verifying : fedora-gpg-keys-38-0.3.noarch 89/136 Verifying : fedora-release-38-0.4.noarch 90/136 Verifying : fedora-release-common-38-0.4.noarch 91/136 Verifying : fedora-release-identity-basic-38-0.4.noarch 92/136 Verifying : fedora-repos-38-0.3.noarch 93/136 Verifying : fedora-repos-rawhide-38-0.3.noarch 94/136 Verifying : filesystem-3.18-2.fc37.x86_64 95/136 Verifying : glib2-2.74.1-2.fc38.x86_64 96/136 Verifying : glibc-2.36.9000-13.fc38.x86_64 97/136 Verifying : glibc-common-2.36.9000-13.fc38.x86_64 98/136 Verifying : glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 99/136 Verifying : gnutls-3.7.8-9.fc38.x86_64 100/136 Verifying : json-c-0.16-3.fc38.x86_64 101/136 Verifying : libbrotli-1.0.9-9.fc37.x86_64 102/136 Verifying : libdnf-0.68.0-1.fc38.x86_64 103/136 Verifying : libffi-3.4.4-1.fc38.x86_64 104/136 Verifying : libgcc-12.2.1-3.fc38.x86_64 105/136 Verifying : libgcrypt-1.10.1-5.fc38.x86_64 106/136 Verifying : libgomp-12.2.1-3.fc38.x86_64 107/136 Verifying : libmodulemd-2.14.0-4.fc37.x86_64 108/136 Verifying : librepo-1.14.4-1.fc38.x86_64 109/136 Verifying : libreport-filesystem-2.17.6-1.fc38.noarch 110/136 Verifying : libsolv-0.7.22-3.fc37.x86_64 111/136 Verifying : libssh-0.10.4-2.fc38.x86_64 112/136 Verifying : libssh-config-0.10.4-2.fc38.noarch 113/136 Verifying : libstdc++-12.2.1-3.fc38.x86_64 114/136 Verifying : libxcrypt-4.4.30-3.fc38.x86_64 115/136 Verifying : libxml2-2.10.3-2.fc38.x86_64 116/136 Verifying : openssl-libs-1:3.0.5-6.fc38.x86_64 117/136 Verifying : p11-kit-0.24.1-3.fc37.x86_64 118/136 Verifying : p11-kit-trust-0.24.1-3.fc37.x86_64 119/136 Verifying : publicsuffix-list-dafsa-20210518-5.fc37.noarch 120/136 Verifying : python-pip-wheel-22.2.2-2.fc38.noarch 121/136 Verifying : python-setuptools-wheel-65.5.1-1.fc38.noarch 122/136 Verifying : python3-distro-1.8.0-1.fc38.noarch 123/136 Verifying : python3-dnf-4.14.0-1.fc38.noarch 124/136 Verifying : python3-dnf-plugins-core-4.3.1-1.fc38.noarch 125/136 Verifying : python3-hawkey-0.68.0-1.fc38.x86_64 126/136 Verifying : python3-libdnf-0.68.0-1.fc38.x86_64 127/136 Verifying : python3-rpm-4.18.0-6.fc38.x86_64 128/136 Verifying : python3-six-1.16.0-8.fc37.noarch 129/136 Verifying : rpm-4.18.0-6.fc38.x86_64 130/136 Verifying : rpm-build-libs-4.18.0-6.fc38.x86_64 131/136 Verifying : rpm-libs-4.18.0-6.fc38.x86_64 132/136 Verifying : rpm-sign-libs-4.18.0-6.fc38.x86_64 133/136 Verifying : shadow-utils-2:4.13-1.fc38.x86_64 134/136 Verifying : systemd-libs-252.1-588.fc38.x86_64 135/136 Verifying : zchunk-libs-1.2.3-1.fc38.x86_64 136/136 Installed products updated. Installed: alternatives-1.21-1.fc38.x86_64 audit-libs-3.0.9-1.fc38.x86_64 basesystem-11-14.fc37.noarch bash-5.2.2-2.fc38.x86_64 bzip2-libs-1.0.8-12.fc38.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 crypto-policies-20221110-1.git87a75f4.fc38.noarch curl-7.86.0-2.fc38.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 dbus-libs-1:1.14.4-1.fc38.x86_64 dnf-4.14.0-1.fc38.noarch dnf-data-4.14.0-1.fc38.noarch dnf-plugins-core-4.3.1-1.fc38.noarch elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 expat-2.4.8-2.fc38.x86_64 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.4.noarch fedora-release-common-38-0.4.noarch fedora-release-identity-basic-38-0.4.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-libs-5.42-4.fc38.x86_64 filesystem-3.18-2.fc37.x86_64 findutils-1:4.9.0-2.fc38.x86_64 gawk-5.1.1-4.fc38.x86_64 gdbm-libs-1:1.23-2.fc38.x86_64 glib2-2.74.1-2.fc38.x86_64 glibc-2.36.9000-13.fc38.x86_64 glibc-common-2.36.9000-13.fc38.x86_64 glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 gmp-1:6.2.1-3.fc38.x86_64 gnupg2-2.3.8-1.fc38.x86_64 gnutls-3.7.8-9.fc38.x86_64 gpgme-1.17.0-4.fc38.x86_64 grep-3.8-1.fc38.x86_64 ima-evm-utils-1.4-6.fc38.x86_64 json-c-0.16-3.fc38.x86_64 keyutils-libs-1.6.1-5.fc38.x86_64 krb5-libs-1.19.2-11.fc38.1.x86_64 libacl-2.3.1-4.fc38.x86_64 libarchive-3.6.1-2.fc38.x86_64 libassuan-2.5.5-5.fc38.x86_64 libattr-2.5.1-5.fc38.x86_64 libb2-0.98.1-7.fc38.x86_64 libblkid-2.38.1-2.fc38.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc38.x86_64 libcap-ng-0.8.3-3.fc38.x86_64 libcom_err-1.46.5-3.fc38.x86_64 libcomps-0.1.18-4.fc38.x86_64 libcurl-7.86.0-2.fc38.x86_64 libdnf-0.68.0-1.fc38.x86_64 libevent-2.1.12-7.fc38.x86_64 libffi-3.4.4-1.fc38.x86_64 libfsverity-1.4-8.fc38.x86_64 libgcc-12.2.1-3.fc38.x86_64 libgcrypt-1.10.1-5.fc38.x86_64 libgomp-12.2.1-3.fc38.x86_64 libgpg-error-1.46-1.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 libksba-1.6.2-1.fc38.x86_64 libmodulemd-2.14.0-4.fc37.x86_64 libmount-2.38.1-2.fc38.x86_64 libnghttp2-1.50.0-1.fc38.x86_64 libnsl2-2.0.0-4.fc38.x86_64 libpsl-0.21.1-6.fc38.x86_64 librepo-1.14.4-1.fc38.x86_64 libreport-filesystem-2.17.6-1.fc38.noarch libselinux-3.4-5.fc38.x86_64 libsemanage-3.4-5.fc38.x86_64 libsepol-3.4-3.fc38.x86_64 libsigsegv-2.14-3.fc38.x86_64 libsmartcols-2.38.1-2.fc38.x86_64 libsolv-0.7.22-3.fc37.x86_64 libssh-0.10.4-2.fc38.x86_64 libssh-config-0.10.4-2.fc38.noarch libstdc++-12.2.1-3.fc38.x86_64 libtasn1-4.18.0-3.fc38.x86_64 libtirpc-1.3.3-0.fc38.x86_64 libunistring-1.0-2.fc38.x86_64 libuuid-2.38.1-2.fc38.x86_64 libverto-0.3.2-4.fc38.x86_64 libxcrypt-4.4.30-3.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 libyaml-0.2.5-8.fc38.x86_64 libzstd-1.5.2-3.fc38.x86_64 lua-libs-5.4.4-6.fc38.x86_64 lz4-libs-1.9.3-5.fc38.x86_64 mpdecimal-2.5.1-4.fc38.x86_64 mpfr-4.1.0-10.fc38.x86_64 ncurses-base-6.3-3.20220501.fc38.noarch ncurses-libs-6.3-3.20220501.fc38.x86_64 nettle-3.8-2.fc38.x86_64 npth-1.6-10.fc38.x86_64 openldap-2.6.3-1.fc38.x86_64 openssl-libs-1:3.0.5-6.fc38.x86_64 p11-kit-0.24.1-3.fc37.x86_64 p11-kit-trust-0.24.1-3.fc37.x86_64 pcre2-10.40-1.fc38.1.x86_64 pcre2-syntax-10.40-1.fc38.1.noarch popt-1.19-1.fc38.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch python-pip-wheel-22.2.2-2.fc38.noarch python-setuptools-wheel-65.5.1-1.fc38.noarch python3-3.11.0-1.fc38.x86_64 python3-dateutil-1:2.8.2-4.fc38.noarch python3-dbus-1.3.2-1.fc38.x86_64 python3-distro-1.8.0-1.fc38.noarch python3-dnf-4.14.0-1.fc38.noarch python3-dnf-plugins-core-4.3.1-1.fc38.noarch python3-gpg-1.17.0-4.fc38.x86_64 python3-hawkey-0.68.0-1.fc38.x86_64 python3-libcomps-0.1.18-4.fc38.x86_64 python3-libdnf-0.68.0-1.fc38.x86_64 python3-libs-3.11.0-1.fc38.x86_64 python3-rpm-4.18.0-6.fc38.x86_64 python3-six-1.16.0-8.fc37.noarch readline-8.2-2.fc38.x86_64 rpm-4.18.0-6.fc38.x86_64 rpm-build-libs-4.18.0-6.fc38.x86_64 rpm-libs-4.18.0-6.fc38.x86_64 rpm-sign-libs-4.18.0-6.fc38.x86_64 sed-4.8-11.fc38.x86_64 setup-2.14.2-1.fc38.noarch shadow-utils-2:4.13-1.fc38.x86_64 sqlite-libs-3.39.4-1.fc38.x86_64 systemd-libs-252.1-588.fc38.x86_64 tpm2-tss-3.2.0-3.fc38.x86_64 tzdata-2022f-1.fc38.noarch xz-libs-5.2.7-1.fc38.x86_64 zchunk-libs-1.2.3-1.fc38.x86_64 zlib-1.2.12-5.fc38.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.3 INFO: Mock Version: 3.3 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 48 kB/s | 3.0 kB 00:00 Copr repository 53 MB/s | 37 MB 00:00 fedora 419 kB/s | 20 kB 00:00 fedora 1.2 MB/s | 1.7 MB 00:01 Last metadata expiration check: 0:00:01 ago on Mon Nov 14 13:28:02 2022. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.2-2.fc38 copr_base 1.8 M bzip2 x86_64 1.0.8-12.fc38 copr_base 53 k coreutils x86_64 9.1-8.fc38 copr_base 1.1 M cpio x86_64 2.13-13.fc38 copr_base 270 k diffutils x86_64 3.8-3.fc37 fedora 378 k fedora-release-common noarch 38-0.4 fedora 22 k findutils x86_64 1:4.9.0-2.fc38 copr_base 483 k gawk x86_64 5.1.1-4.fc38 copr_base 1.0 M glibc-minimal-langpack x86_64 2.36.9000-13.fc38 fedora 25 k grep x86_64 3.8-1.fc38 copr_base 282 k gzip x86_64 1.12-2.fc38 copr_base 159 k info x86_64 6.8-4.fc38 copr_base 225 k patch x86_64 2.7.6-17.fc38 copr_base 124 k redhat-rpm-config noarch 233-1.fc38 fedora 81 k rpm-build x86_64 4.18.0-6.fc38 fedora 77 k sed x86_64 4.8-11.fc38 copr_base 297 k shadow-utils x86_64 2:4.13-1.fc38 fedora 1.3 M tar x86_64 2:1.34-5.fc38 fedora 885 k unzip x86_64 6.0-58.fc38 copr_base 183 k util-linux x86_64 2.38.1-2.fc38 copr_base 2.3 M which x86_64 2.21-36.fc38 fedora 41 k xz x86_64 5.2.7-1.fc38 copr_base 294 k Installing dependencies: alternatives x86_64 1.21-1.fc38 copr_base 38 k ansible-srpm-macros noarch 1-8.1.fc38 fedora 8.6 k audit-libs x86_64 3.0.9-1.fc38 copr_base 116 k authselect x86_64 1.4.0-3.fc37 fedora 144 k authselect-libs x86_64 1.4.0-3.fc37 fedora 248 k basesystem noarch 11-14.fc37 fedora 7.0 k binutils x86_64 2.39-5.fc38 fedora 5.4 M binutils-gold x86_64 2.39-5.fc38 fedora 777 k bzip2-libs x86_64 1.0.8-12.fc38 copr_base 42 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils-common x86_64 9.1-8.fc38 copr_base 2.0 M cracklib x86_64 2.9.7-30.fc38 copr_base 81 k crypto-policies noarch 20221110-1.git87a75f4.fc38 fedora 90 k curl x86_64 7.86.0-2.fc38 copr_base 335 k cyrus-sasl-lib x86_64 2.1.28-8.fc38 copr_base 794 k debugedit x86_64 5.0-5.fc38 copr_base 77 k dwz x86_64 0.15-1.fc38 fedora 136 k ed x86_64 1.18-2.fc38 copr_base 79 k efi-srpm-macros noarch 5-6.fc38 copr_base 23 k elfutils x86_64 0.188-3.fc38 fedora 529 k elfutils-debuginfod-client x86_64 0.188-3.fc38 fedora 40 k elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k elfutils-libs x86_64 0.188-3.fc38 fedora 257 k fedora-gpg-keys noarch 38-0.3 fedora 125 k fedora-release noarch 38-0.4 fedora 11 k fedora-release-identity-basic noarch 38-0.4 fedora 12 k fedora-repos noarch 38-0.3 fedora 10 k fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k file x86_64 5.42-4.fc38 copr_base 49 k file-libs x86_64 5.42-4.fc38 copr_base 676 k filesystem x86_64 3.18-2.fc37 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-9.fc38 fedora 26 k fpc-srpm-macros noarch 1.3-6.fc37 fedora 7.7 k gdb-minimal x86_64 12.1-9.fc38 fedora 3.7 M gdbm-libs x86_64 1:1.23-2.fc38 copr_base 56 k ghc-srpm-macros noarch 1.5.0-7.fc37 fedora 7.8 k glibc x86_64 2.36.9000-13.fc38 fedora 2.1 M glibc-common x86_64 2.36.9000-13.fc38 fedora 304 k glibc-gconv-extra x86_64 2.36.9000-13.fc38 fedora 1.6 M gmp x86_64 1:6.2.1-3.fc38 copr_base 316 k gnat-srpm-macros noarch 4-16.fc37 fedora 8.3 k go-srpm-macros noarch 3.2.0-1.fc38 fedora 27 k jansson x86_64 2.13.1-5.fc38 copr_base 45 k kernel-srpm-macros noarch 1.0-15.fc37 fedora 9.4 k keyutils-libs x86_64 1.6.1-5.fc38 copr_base 32 k krb5-libs x86_64 1.19.2-11.fc38.1 copr_base 724 k libacl x86_64 2.3.1-4.fc38 copr_base 24 k libarchive x86_64 3.6.1-2.fc38 copr_base 397 k libattr x86_64 2.5.1-5.fc38 copr_base 18 k libblkid x86_64 2.38.1-2.fc38 copr_base 107 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc38 copr_base 67 k libcap-ng x86_64 0.8.3-3.fc38 copr_base 33 k libcom_err x86_64 1.46.5-3.fc38 copr_base 26 k libcurl x86_64 7.86.0-2.fc38 copr_base 305 k libdb x86_64 5.3.28-53.fc37 fedora 760 k libeconf x86_64 0.4.0-4.fc38 copr_base 28 k libevent x86_64 2.1.12-7.fc38 copr_base 259 k libfdisk x86_64 2.38.1-2.fc38 copr_base 161 k libffi x86_64 3.4.4-1.fc38 fedora 38 k libgcc x86_64 12.2.1-3.fc38 fedora 108 k libgomp x86_64 12.2.1-3.fc38 fedora 295 k libidn2 x86_64 2.3.4-1.fc38 copr_base 154 k libmount x86_64 2.38.1-2.fc38 copr_base 136 k libnghttp2 x86_64 1.50.0-1.fc38 copr_base 75 k libnsl2 x86_64 2.0.0-4.fc38 copr_base 31 k libpkgconf x86_64 1.8.0-3.fc38 copr_base 36 k libpsl x86_64 0.21.1-6.fc38 copr_base 64 k libpwquality x86_64 1.4.4-11.fc38 copr_base 105 k libselinux x86_64 3.4-5.fc38 copr_base 86 k libsemanage x86_64 3.4-5.fc38 copr_base 120 k libsepol x86_64 3.4-3.fc38 copr_base 322 k libsigsegv x86_64 2.14-3.fc38 copr_base 27 k libsmartcols x86_64 2.38.1-2.fc38 copr_base 65 k libssh x86_64 0.10.4-2.fc38 fedora 209 k libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k libstdc++ x86_64 12.2.1-3.fc38 fedora 799 k libtasn1 x86_64 4.18.0-3.fc38 copr_base 75 k libtirpc x86_64 1.3.3-0.fc38 copr_base 94 k libunistring x86_64 1.0-2.fc38 copr_base 549 k libutempter x86_64 1.2.1-7.fc38 copr_base 26 k libuuid x86_64 2.38.1-2.fc38 copr_base 28 k libverto x86_64 0.3.2-4.fc38 copr_base 21 k libxcrypt x86_64 4.4.30-3.fc38 fedora 118 k libxml2 x86_64 2.10.3-2.fc38 fedora 705 k libzstd x86_64 1.5.2-3.fc38 copr_base 295 k lua-libs x86_64 5.4.4-6.fc38 copr_base 132 k lua-srpm-macros noarch 1-7.fc37 fedora 8.8 k lz4-libs x86_64 1.9.3-5.fc38 copr_base 71 k mpfr x86_64 4.1.0-10.fc38 copr_base 331 k ncurses-base noarch 6.3-3.20220501.fc38 copr_base 62 k ncurses-libs x86_64 6.3-3.20220501.fc38 copr_base 329 k nim-srpm-macros noarch 3-7.fc37 fedora 8.4 k ocaml-srpm-macros noarch 7-2.fc37 fedora 13 k openblas-srpm-macros noarch 2-12.fc37 fedora 7.5 k openldap x86_64 2.6.3-1.fc38 copr_base 254 k openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M p11-kit x86_64 0.24.1-3.fc37 fedora 376 k p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k package-notes-srpm-macros noarch 0.5-6.fc38 fedora 11 k pam x86_64 1.5.2-14.fc37 fedora 560 k pam-libs x86_64 1.5.2-14.fc37 fedora 58 k pcre2 x86_64 10.40-1.fc38.1 copr_base 237 k pcre2-syntax noarch 10.40-1.fc38.1 copr_base 143 k perl-srpm-macros noarch 1-46.fc37 fedora 8.3 k pkgconf x86_64 1.8.0-3.fc38 copr_base 42 k pkgconf-m4 noarch 1.8.0-3.fc38 copr_base 15 k pkgconf-pkg-config x86_64 1.8.0-3.fc38 copr_base 11 k popt x86_64 1.19-1.fc38 copr_base 59 k publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k python-srpm-macros noarch 3.11-5.fc38 fedora 24 k qt5-srpm-macros noarch 5.15.7-1.fc38 fedora 7.9 k readline x86_64 8.2-2.fc38 copr_base 211 k rpm x86_64 4.18.0-6.fc38 fedora 572 k rpm-build-libs x86_64 4.18.0-6.fc38 fedora 94 k rpm-libs x86_64 4.18.0-6.fc38 fedora 320 k rpmautospec-rpm-macros noarch 0.3.1-1.fc38 fedora 8.8 k rust-srpm-macros noarch 23-1.fc38 fedora 9.4 k setup noarch 2.14.2-1.fc38 copr_base 145 k sqlite-libs x86_64 3.39.4-1.fc38 copr_base 659 k systemd-libs x86_64 252.1-588.fc38 fedora 631 k tzdata noarch 2022f-1.fc38 copr_base 431 k util-linux-core x86_64 2.38.1-2.fc38 copr_base 455 k xxhash-libs x86_64 0.8.1-3.fc38 copr_base 41 k xz-libs x86_64 5.2.7-1.fc38 copr_base 93 k zip x86_64 3.0-33.fc38 copr_base 260 k zlib x86_64 1.2.12-5.fc38 copr_base 94 k zstd x86_64 1.5.2-3.fc38 copr_base 448 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 151 Packages Total size: 51 M Installed size: 177 M Downloading Packages: [SKIPPED] alternatives-1.21-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0.9-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] bash-5.2.2-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-12.fc38.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-12.fc38.x86_64.rpm: Already downloaded [SKIPPED] coreutils-9.1-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-9.1-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.7-30.fc38.x86_64.rpm: Already downloaded [SKIPPED] curl-7.86.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] debugedit-5.0-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] ed-1.18-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-6.fc38.noarch.rpm: Already downloaded [SKIPPED] file-5.42-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.42-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.9.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] gawk-5.1.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] gmp-6.2.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] grep-3.8-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.12-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] info-6.8-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] jansson-2.13.1-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] krb5-libs-1.19.2-11.fc38.1.x86_64.rpm: Already downloaded [SKIPPED] libacl-2.3.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.6.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.5.1-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libcap-2.48-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.46.5-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libcurl-7.86.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libeconf-0.4.0-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libevent-2.1.12-7.fc38.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libidn2-2.3.4-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libmount-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libnghttp2-1.50.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpkgconf-1.8.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpsl-0.21.1-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.4-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] libselinux-3.4-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsemanage-3.4-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsepol-3.4-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libtasn1-4.18.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libtirpc-1.3.3-0.fc38.x86_64.rpm: Already downloaded [SKIPPED] libunistring-1.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-7.fc38.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libverto-0.3.2-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libzstd-1.5.2-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] lua-libs-5.4.4-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.3-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] mpfr-4.1.0-10.fc38.x86_64.rpm: Already downloaded [SKIPPED] ncurses-base-6.3-3.20220501.fc38.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.3-3.20220501.fc38.x86_64.rpm: Already downloaded [SKIPPED] openldap-2.6.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] patch-2.7.6-17.fc38.x86_64.rpm: Already downloaded [SKIPPED] pcre2-10.40-1.fc38.1.x86_64.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.40-1.fc38.1.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.8.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.8.0-3.fc38.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.8.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] popt-1.19-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] readline-8.2-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] sed-4.8-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] setup-2.14.2-1.fc38.noarch.rpm: Already downloaded [SKIPPED] sqlite-libs-3.39.4-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2022f-1.fc38.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-58.fc38.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] util-linux-core-2.38.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.7-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.7-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-33.fc38.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.12-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.5.2-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-8.1.fc38.noarch.rpm: Already downloaded [SKIPPED] authselect-1.4.0-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.0-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-14.fc37.noarch.rpm: Already downloaded [SKIPPED] binutils-2.39-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.39-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2022.2.54-5.fc37.noarch.rpm: Already downloaded [SKIPPED] crypto-policies-20221110-1.git87a75f4.fc38.noarch.rpm: Already downloaded [SKIPPED] diffutils-3.8-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.15-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] elfutils-0.188-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.188-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.188-3.fc38.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.188-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.188-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-38-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-release-38-0.4.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-38-0.4.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-38-0.4.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-38-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-38-0.3.noarch.rpm: Already downloaded [SKIPPED] filesystem-3.18-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-9.fc38.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-6.fc37.noarch.rpm: Already downloaded [SKIPPED] gdb-minimal-12.1-9.fc38.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.5.0-7.fc37.noarch.rpm: Already downloaded [SKIPPED] glibc-2.36.9000-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.36.9000-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.36.9000-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.36.9000-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-4-16.fc37.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.2.0-1.fc38.noarch.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-15.fc37.noarch.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-9.fc37.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-53.fc37.x86_64.rpm: Already downloaded [SKIPPED] libffi-3.4.4-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libgcc-12.2.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libgomp-12.2.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libssh-0.10.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libssh-config-0.10.4-2.fc38.noarch.rpm: Already downloaded [SKIPPED] libstdc++-12.2.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.30-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libxml2-2.10.3-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-7.fc37.noarch.rpm: Already downloaded [SKIPPED] nim-srpm-macros-3-7.fc37.noarch.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-7-2.fc37.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-12.fc37.noarch.rpm: Already downloaded [SKIPPED] openssl-libs-3.0.5-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-0.24.1-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.24.1-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.5-6.fc38.noarch.rpm: Already downloaded [SKIPPED] pam-1.5.2-14.fc37.x86_64.rpm: Already downloaded [SKIPPED] pam-libs-1.5.2-14.fc37.x86_64.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-46.fc37.noarch.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20210518-5.fc37.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.11-5.fc38.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.7-1.fc38.noarch.rpm: Already downloaded [SKIPPED] redhat-rpm-config-233-1.fc38.noarch.rpm: Already downloaded [SKIPPED] rpm-4.18.0-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.18.0-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.18.0-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.18.0-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpmautospec-rpm-macros-0.3.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-23-1.fc38.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.13-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-252.1-588.fc38.x86_64.rpm: Already downloaded [SKIPPED] tar-1.34-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-36.fc38.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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go-srpm-macros-3.2.0-1.fc38.noarch 115/151 Verifying : kernel-srpm-macros-1.0-15.fc37.noarch 116/151 Verifying : libbrotli-1.0.9-9.fc37.x86_64 117/151 Verifying : libdb-5.3.28-53.fc37.x86_64 118/151 Verifying : libffi-3.4.4-1.fc38.x86_64 119/151 Verifying : libgcc-12.2.1-3.fc38.x86_64 120/151 Verifying : libgomp-12.2.1-3.fc38.x86_64 121/151 Verifying : libssh-0.10.4-2.fc38.x86_64 122/151 Verifying : libssh-config-0.10.4-2.fc38.noarch 123/151 Verifying : libstdc++-12.2.1-3.fc38.x86_64 124/151 Verifying : libxcrypt-4.4.30-3.fc38.x86_64 125/151 Verifying : libxml2-2.10.3-2.fc38.x86_64 126/151 Verifying : lua-srpm-macros-1-7.fc37.noarch 127/151 Verifying : nim-srpm-macros-3-7.fc37.noarch 128/151 Verifying : ocaml-srpm-macros-7-2.fc37.noarch 129/151 Verifying : openblas-srpm-macros-2-12.fc37.noarch 130/151 Verifying : openssl-libs-1:3.0.5-6.fc38.x86_64 131/151 Verifying : p11-kit-0.24.1-3.fc37.x86_64 132/151 Verifying : p11-kit-trust-0.24.1-3.fc37.x86_64 133/151 Verifying : package-notes-srpm-macros-0.5-6.fc38.noarch 134/151 Verifying : pam-1.5.2-14.fc37.x86_64 135/151 Verifying : pam-libs-1.5.2-14.fc37.x86_64 136/151 Verifying : perl-srpm-macros-1-46.fc37.noarch 137/151 Verifying : publicsuffix-list-dafsa-20210518-5.fc37.noarch 138/151 Verifying : python-srpm-macros-3.11-5.fc38.noarch 139/151 Verifying : qt5-srpm-macros-5.15.7-1.fc38.noarch 140/151 Verifying : redhat-rpm-config-233-1.fc38.noarch 141/151 Verifying : rpm-4.18.0-6.fc38.x86_64 142/151 Verifying : rpm-build-4.18.0-6.fc38.x86_64 143/151 Verifying : rpm-build-libs-4.18.0-6.fc38.x86_64 144/151 Verifying : rpm-libs-4.18.0-6.fc38.x86_64 145/151 Verifying : rpmautospec-rpm-macros-0.3.1-1.fc38.noarch 146/151 Verifying : rust-srpm-macros-23-1.fc38.noarch 147/151 Verifying : shadow-utils-2:4.13-1.fc38.x86_64 148/151 Verifying : systemd-libs-252.1-588.fc38.x86_64 149/151 Verifying : tar-2:1.34-5.fc38.x86_64 150/151 Verifying : which-2.21-36.fc38.x86_64 151/151 Installed: alternatives-1.21-1.fc38.x86_64 ansible-srpm-macros-1-8.1.fc38.noarch audit-libs-3.0.9-1.fc38.x86_64 authselect-1.4.0-3.fc37.x86_64 authselect-libs-1.4.0-3.fc37.x86_64 basesystem-11-14.fc37.noarch bash-5.2.2-2.fc38.x86_64 binutils-2.39-5.fc38.x86_64 binutils-gold-2.39-5.fc38.x86_64 bzip2-1.0.8-12.fc38.x86_64 bzip2-libs-1.0.8-12.fc38.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 cpio-2.13-13.fc38.x86_64 cracklib-2.9.7-30.fc38.x86_64 crypto-policies-20221110-1.git87a75f4.fc38.noarch curl-7.86.0-2.fc38.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 debugedit-5.0-5.fc38.x86_64 diffutils-3.8-3.fc37.x86_64 dwz-0.15-1.fc38.x86_64 ed-1.18-2.fc38.x86_64 efi-srpm-macros-5-6.fc38.noarch elfutils-0.188-3.fc38.x86_64 elfutils-debuginfod-client-0.188-3.fc38.x86_64 elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.4.noarch fedora-release-common-38-0.4.noarch fedora-release-identity-basic-38-0.4.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-5.42-4.fc38.x86_64 file-libs-5.42-4.fc38.x86_64 filesystem-3.18-2.fc37.x86_64 findutils-1:4.9.0-2.fc38.x86_64 fonts-srpm-macros-1:2.0.5-9.fc38.noarch fpc-srpm-macros-1.3-6.fc37.noarch gawk-5.1.1-4.fc38.x86_64 gdb-minimal-12.1-9.fc38.x86_64 gdbm-libs-1:1.23-2.fc38.x86_64 ghc-srpm-macros-1.5.0-7.fc37.noarch glibc-2.36.9000-13.fc38.x86_64 glibc-common-2.36.9000-13.fc38.x86_64 glibc-gconv-extra-2.36.9000-13.fc38.x86_64 glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 gmp-1:6.2.1-3.fc38.x86_64 gnat-srpm-macros-4-16.fc37.noarch go-srpm-macros-3.2.0-1.fc38.noarch grep-3.8-1.fc38.x86_64 gzip-1.12-2.fc38.x86_64 info-6.8-4.fc38.x86_64 jansson-2.13.1-5.fc38.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch keyutils-libs-1.6.1-5.fc38.x86_64 krb5-libs-1.19.2-11.fc38.1.x86_64 libacl-2.3.1-4.fc38.x86_64 libarchive-3.6.1-2.fc38.x86_64 libattr-2.5.1-5.fc38.x86_64 libblkid-2.38.1-2.fc38.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc38.x86_64 libcap-ng-0.8.3-3.fc38.x86_64 libcom_err-1.46.5-3.fc38.x86_64 libcurl-7.86.0-2.fc38.x86_64 libdb-5.3.28-53.fc37.x86_64 libeconf-0.4.0-4.fc38.x86_64 libevent-2.1.12-7.fc38.x86_64 libfdisk-2.38.1-2.fc38.x86_64 libffi-3.4.4-1.fc38.x86_64 libgcc-12.2.1-3.fc38.x86_64 libgomp-12.2.1-3.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 libmount-2.38.1-2.fc38.x86_64 libnghttp2-1.50.0-1.fc38.x86_64 libnsl2-2.0.0-4.fc38.x86_64 libpkgconf-1.8.0-3.fc38.x86_64 libpsl-0.21.1-6.fc38.x86_64 libpwquality-1.4.4-11.fc38.x86_64 libselinux-3.4-5.fc38.x86_64 libsemanage-3.4-5.fc38.x86_64 libsepol-3.4-3.fc38.x86_64 libsigsegv-2.14-3.fc38.x86_64 libsmartcols-2.38.1-2.fc38.x86_64 libssh-0.10.4-2.fc38.x86_64 libssh-config-0.10.4-2.fc38.noarch libstdc++-12.2.1-3.fc38.x86_64 libtasn1-4.18.0-3.fc38.x86_64 libtirpc-1.3.3-0.fc38.x86_64 libunistring-1.0-2.fc38.x86_64 libutempter-1.2.1-7.fc38.x86_64 libuuid-2.38.1-2.fc38.x86_64 libverto-0.3.2-4.fc38.x86_64 libxcrypt-4.4.30-3.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 libzstd-1.5.2-3.fc38.x86_64 lua-libs-5.4.4-6.fc38.x86_64 lua-srpm-macros-1-7.fc37.noarch lz4-libs-1.9.3-5.fc38.x86_64 mpfr-4.1.0-10.fc38.x86_64 ncurses-base-6.3-3.20220501.fc38.noarch ncurses-libs-6.3-3.20220501.fc38.x86_64 nim-srpm-macros-3-7.fc37.noarch ocaml-srpm-macros-7-2.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch openldap-2.6.3-1.fc38.x86_64 openssl-libs-1:3.0.5-6.fc38.x86_64 p11-kit-0.24.1-3.fc37.x86_64 p11-kit-trust-0.24.1-3.fc37.x86_64 package-notes-srpm-macros-0.5-6.fc38.noarch pam-1.5.2-14.fc37.x86_64 pam-libs-1.5.2-14.fc37.x86_64 patch-2.7.6-17.fc38.x86_64 pcre2-10.40-1.fc38.1.x86_64 pcre2-syntax-10.40-1.fc38.1.noarch perl-srpm-macros-1-46.fc37.noarch pkgconf-1.8.0-3.fc38.x86_64 pkgconf-m4-1.8.0-3.fc38.noarch pkgconf-pkg-config-1.8.0-3.fc38.x86_64 popt-1.19-1.fc38.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch python-srpm-macros-3.11-5.fc38.noarch qt5-srpm-macros-5.15.7-1.fc38.noarch readline-8.2-2.fc38.x86_64 redhat-rpm-config-233-1.fc38.noarch rpm-4.18.0-6.fc38.x86_64 rpm-build-4.18.0-6.fc38.x86_64 rpm-build-libs-4.18.0-6.fc38.x86_64 rpm-libs-4.18.0-6.fc38.x86_64 rpmautospec-rpm-macros-0.3.1-1.fc38.noarch rust-srpm-macros-23-1.fc38.noarch sed-4.8-11.fc38.x86_64 setup-2.14.2-1.fc38.noarch shadow-utils-2:4.13-1.fc38.x86_64 sqlite-libs-3.39.4-1.fc38.x86_64 systemd-libs-252.1-588.fc38.x86_64 tar-2:1.34-5.fc38.x86_64 tzdata-2022f-1.fc38.noarch unzip-6.0-58.fc38.x86_64 util-linux-2.38.1-2.fc38.x86_64 util-linux-core-2.38.1-2.fc38.x86_64 which-2.21-36.fc38.x86_64 xxhash-libs-0.8.1-3.fc38.x86_64 xz-5.2.7-1.fc38.x86_64 xz-libs-5.2.7-1.fc38.x86_64 zip-3.0-33.fc38.x86_64 zlib-1.2.12-5.fc38.x86_64 zstd-1.5.2-3.fc38.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: sqlite-libs-3.39.4-1.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 lua-libs-5.4.4-6.fc38.x86_64 elfutils-default-yama-scope-0.188-3.fc38.noarch libdb-5.3.28-53.fc37.x86_64 libsmartcols-2.38.1-2.fc38.x86_64 shadow-utils-4.13-1.fc38.x86_64 libbrotli-1.0.9-9.fc37.x86_64 alternatives-1.21-1.fc38.x86_64 setup-2.14.2-1.fc38.noarch ed-1.18-2.fc38.x86_64 dwz-0.15-1.fc38.x86_64 systemd-libs-252.1-588.fc38.x86_64 rpm-build-4.18.0-6.fc38.x86_64 basesystem-11-14.fc37.noarch go-srpm-macros-3.2.0-1.fc38.noarch authselect-libs-1.4.0-3.fc37.x86_64 pcre2-syntax-10.40-1.fc38.1.noarch libpkgconf-1.8.0-3.fc38.x86_64 libmount-2.38.1-2.fc38.x86_64 rpmautospec-rpm-macros-0.3.1-1.fc38.noarch info-6.8-4.fc38.x86_64 file-libs-5.42-4.fc38.x86_64 audit-libs-3.0.9-1.fc38.x86_64 crypto-policies-20221110-1.git87a75f4.fc38.noarch libblkid-2.38.1-2.fc38.x86_64 curl-7.86.0-2.fc38.x86_64 libtirpc-1.3.3-0.fc38.x86_64 bash-5.2.2-2.fc38.x86_64 tar-1.34-5.fc38.x86_64 libgcc-12.2.1-3.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 libsigsegv-2.14-3.fc38.x86_64 pkgconf-1.8.0-3.fc38.x86_64 libcap-ng-0.8.3-3.fc38.x86_64 util-linux-core-2.38.1-2.fc38.x86_64 zstd-1.5.2-3.fc38.x86_64 which-2.21-36.fc38.x86_64 libssh-0.10.4-2.fc38.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 ncurses-base-6.3-3.20220501.fc38.noarch ghc-srpm-macros-1.5.0-7.fc37.noarch fpc-srpm-macros-1.3-6.fc37.noarch lua-srpm-macros-1-7.fc37.noarch p11-kit-trust-0.24.1-3.fc37.x86_64 patch-2.7.6-17.fc38.x86_64 mpfr-4.1.0-10.fc38.x86_64 libcurl-7.86.0-2.fc38.x86_64 fedora-repos-38-0.3.noarch pkgconf-m4-1.8.0-3.fc38.noarch xz-5.2.7-1.fc38.x86_64 zip-3.0-33.fc38.x86_64 ca-certificates-2022.2.54-5.fc37.noarch diffutils-3.8-3.fc37.x86_64 grep-3.8-1.fc38.x86_64 libacl-2.3.1-4.fc38.x86_64 libpsl-0.21.1-6.fc38.x86_64 ansible-srpm-macros-1-8.1.fc38.noarch gpg-pubkey-5323552a-6112bcdc gdb-minimal-12.1-9.fc38.x86_64 openldap-2.6.3-1.fc38.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch rpm-4.18.0-6.fc38.x86_64 fedora-release-common-38-0.4.noarch ncurses-libs-6.3-3.20220501.fc38.x86_64 cpio-2.13-13.fc38.x86_64 python-srpm-macros-3.11-5.fc38.noarch filesystem-3.18-2.fc37.x86_64 libgomp-12.2.1-3.fc38.x86_64 libstdc++-12.2.1-3.fc38.x86_64 bzip2-libs-1.0.8-12.fc38.x86_64 cracklib-2.9.7-30.fc38.x86_64 pkgconf-pkg-config-1.8.0-3.fc38.x86_64 efi-srpm-macros-5-6.fc38.noarch libsemanage-3.4-5.fc38.x86_64 fedora-release-38-0.4.noarch elfutils-libelf-0.188-3.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 fedora-repos-rawhide-38-0.3.noarch perl-srpm-macros-1-46.fc37.noarch pam-1.5.2-14.fc37.x86_64 tzdata-2022f-1.fc38.noarch libtasn1-4.18.0-3.fc38.x86_64 libcom_err-1.46.5-3.fc38.x86_64 lz4-libs-1.9.3-5.fc38.x86_64 libffi-3.4.4-1.fc38.x86_64 gawk-5.1.1-4.fc38.x86_64 rpm-libs-4.18.0-6.fc38.x86_64 nim-srpm-macros-3-7.fc37.noarch unzip-6.0-58.fc38.x86_64 libcap-2.48-5.fc38.x86_64 sed-4.8-11.fc38.x86_64 libpwquality-1.4.4-11.fc38.x86_64 gpg-pubkey-eb10b464-6202d9c6 libverto-0.3.2-4.fc38.x86_64 libselinux-3.4-5.fc38.x86_64 coreutils-9.1-8.fc38.x86_64 file-5.42-4.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 libxcrypt-4.4.30-3.fc38.x86_64 pcre2-10.40-1.fc38.1.x86_64 binutils-2.39-5.fc38.x86_64 glibc-gconv-extra-2.36.9000-13.fc38.x86_64 xxhash-libs-0.8.1-3.fc38.x86_64 libnghttp2-1.50.0-1.fc38.x86_64 glibc-common-2.36.9000-13.fc38.x86_64 keyutils-libs-1.6.1-5.fc38.x86_64 rust-srpm-macros-23-1.fc38.noarch glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 rpm-build-libs-4.18.0-6.fc38.x86_64 package-notes-srpm-macros-0.5-6.fc38.noarch gdbm-libs-1.23-2.fc38.x86_64 libzstd-1.5.2-3.fc38.x86_64 libfdisk-2.38.1-2.fc38.x86_64 util-linux-2.38.1-2.fc38.x86_64 openblas-srpm-macros-2-12.fc37.noarch openssl-libs-3.0.5-6.fc38.x86_64 qt5-srpm-macros-5.15.7-1.fc38.noarch libeconf-0.4.0-4.fc38.x86_64 libsepol-3.4-3.fc38.x86_64 libarchive-3.6.1-2.fc38.x86_64 libssh-config-0.10.4-2.fc38.noarch authselect-1.4.0-3.fc37.x86_64 fonts-srpm-macros-2.0.5-9.fc38.noarch fedora-gpg-keys-38-0.3.noarch binutils-gold-2.39-5.fc38.x86_64 libuuid-2.38.1-2.fc38.x86_64 libnsl2-2.0.0-4.fc38.x86_64 pam-libs-1.5.2-14.fc37.x86_64 krb5-libs-1.19.2-11.fc38.1.x86_64 gzip-1.12-2.fc38.x86_64 publicsuffix-list-dafsa-20210518-5.fc37.noarch gmp-6.2.1-3.fc38.x86_64 findutils-4.9.0-2.fc38.x86_64 p11-kit-0.24.1-3.fc37.x86_64 readline-8.2-2.fc38.x86_64 redhat-rpm-config-233-1.fc38.noarch fedora-release-identity-basic-38-0.4.noarch libutempter-1.2.1-7.fc38.x86_64 debugedit-5.0-5.fc38.x86_64 zlib-1.2.12-5.fc38.x86_64 libevent-2.1.12-7.fc38.x86_64 xz-libs-5.2.7-1.fc38.x86_64 glibc-2.36.9000-13.fc38.x86_64 libunistring-1.0-2.fc38.x86_64 ocaml-srpm-macros-7-2.fc37.noarch jansson-2.13.1-5.fc38.x86_64 elfutils-0.188-3.fc38.x86_64 elfutils-debuginfod-client-0.188-3.fc38.x86_64 libattr-2.5.1-5.fc38.x86_64 bzip2-1.0.8-12.fc38.x86_64 gnat-srpm-macros-4-16.fc37.noarch popt-1.19-1.fc38.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1660780800 Wrote: /builddir/build/SRPMS/openms-2.8.0-0.3.fc38.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-q0ml8n57/openms/openms.spec) Config(child) 1 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=108000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/openms-2.8.0-0.3.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1668432429.168711 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.3 starting (python version = 3.10.4, NVR = mock-3.3-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/openms-2.8.0-0.3.fc38.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1668432429.168711/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1668432429.168711/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.3 INFO: Mock Version: 3.3 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.3 INFO: Mock Version: 3.3 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 39 kB/s | 3.0 kB 00:00 Copr repository 33 MB/s | 37 MB 00:01 fedora 362 kB/s | 20 kB 00:00 fedora 1.4 MB/s | 1.7 MB 00:01 Last metadata expiration check: 0:00:01 ago on Mon Nov 14 13:28:40 2022. Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for openms-2.8.0-0.3.fc38.src.rpm Start: build setup for openms-2.8.0-0.3.fc38.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1660780800 Wrote: /builddir/build/SRPMS/openms-2.8.0-0.3.fc38.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 52 kB/s | 3.0 kB 00:00 Copr repository 49 MB/s | 37 MB 00:00 fedora 444 kB/s | 20 kB 00:00 fedora 1.7 MB/s | 1.7 MB 00:00 Last metadata expiration check: 0:00:01 ago on Mon Nov 14 13:29:05 2022. Package gawk-5.1.1-4.fc38.x86_64 is already installed. Dependencies resolved. ================================================================================================= Package Arch Version Repo Size ================================================================================================= Installing: boost-devel x86_64 1.78.0-9.fc37 fedora 13 M bzip2-devel x86_64 1.0.8-12.fc38 copr_base 214 k cmake x86_64 3.25.0-0.6.rc4.fc38 fedora 6.8 M coin-or-Cbc-devel x86_64 2.10.5-10.fc38 copr_base 109 k coin-or-Cgl-devel x86_64 0.60.3-7.fc38 copr_base 65 k coin-or-Clp-devel x86_64 1.17.6-10.fc38 copr_base 133 k coin-or-CoinUtils-devel x86_64 2.11.4-7.fc38 copr_base 135 k coin-or-Osi-devel x86_64 0.108.6-6.fc38 copr_base 57 k desktop-file-utils x86_64 0.26-7.fc37 fedora 72 k dos2unix x86_64 7.4.3-2.fc38 copr_base 249 k doxygen x86_64 2:1.9.5-2.fc38 fedora 4.7 M eigen3-devel noarch 3.4.0-8.fc38 copr_base 1.1 M gcc-c++ x86_64 12.2.1-3.fc38 fedora 13 M glpk-devel x86_64 5.0-5.fc38 copr_base 61 k gnuplot x86_64 5.4.5-1.fc38 copr_base 831 k graphviz x86_64 7.0.0-2.fc38 copr_base 4.9 M gsl-devel x86_64 2.7.1-2.fc38 copr_base 610 k hdf5-devel x86_64 1.12.1-10.fc38 copr_base 1.3 M libappstream-glib x86_64 0.8.2-1.fc38 fedora 404 k libsvm-devel x86_64 3.30-1.fc38 copr_base 18 k make x86_64 1:4.4-1.fc38 copr_base 571 k patchelf x86_64 0.16.1-1.fc38 copr_base 98 k percolator x86_64 3.05-10.fc38 copr_base 1.9 M qt5-qtbase-devel x86_64 5.15.7-1.fc38 copr_base 3.1 M qt5-qtsvg-devel x86_64 5.15.7-1.fc38 copr_base 27 k qt5-qtwebengine-devel x86_64 5.15.10-3.fc38 copr_base 86 k qt5-qtwebkit-devel x86_64 5.212.0-0.70alpha4.fc38 copr_base 55 k qt5-qtx11extras-devel x86_64 5.15.7-1.fc38 copr_base 16 k sqlite-devel x86_64 3.39.4-1.fc38 copr_base 143 k tbb-devel x86_64 2020.3-12.fc38 copr_base 314 k texlive noarch 9:2021-61.fc38 fedora 11 k texlive-a4wide noarch 9:svn20943.0-61.fc38 fedora 16 k texlive-xtab noarch 9:svn23347.2.3f-61.fc38 fedora 19 k wildmagic5-devel x86_64 5.17-14.fc38 copr_base 413 k xerces-c-devel x86_64 3.2.3-7.fc38 copr_base 435 k xorg-x11-server-Xvfb x86_64 1.20.14-9.fc38 fedora 890 k zlib-devel x86_64 1.2.12-5.fc38 copr_base 45 k Installing dependencies: Lmod x86_64 8.7.14-1.fc38 fedora 258 k MUMPS x86_64 5.5.1-1.fc38 fedora 2.0 M MUMPS-common noarch 5.5.1-1.fc38 fedora 830 k adobe-mappings-cmap noarch 20190730-4.fc38 copr_base 2.1 M adobe-mappings-cmap-deprecated noarch 20190730-4.fc38 copr_base 113 k adobe-mappings-pdf noarch 20190401-2.fc38 copr_base 689 k alsa-lib x86_64 1.2.8-1.fc38 copr_base 502 k annobin-docs noarch 10.92-1.fc38 fedora 92 k annobin-plugin-gcc x86_64 10.92-1.fc38 fedora 888 k autoconf noarch 2.71-4.fc38 fedora 733 k automake noarch 1.16.5-9.fc38 copr_base 675 k avahi-libs x86_64 0.8-17.fc38 copr_base 68 k biber noarch 2.18-1.fc38 fedora 314 k boost x86_64 1.78.0-9.fc37 fedora 14 k boost-atomic x86_64 1.78.0-9.fc37 fedora 20 k boost-chrono x86_64 1.78.0-9.fc37 fedora 27 k boost-container x86_64 1.78.0-9.fc37 fedora 40 k boost-context x86_64 1.78.0-9.fc37 fedora 17 k boost-contract x86_64 1.78.0-9.fc37 fedora 47 k boost-coroutine x86_64 1.78.0-9.fc37 fedora 22 k boost-date-time x86_64 1.78.0-9.fc37 fedora 16 k boost-fiber x86_64 1.78.0-9.fc37 fedora 42 k boost-filesystem x86_64 1.78.0-9.fc37 fedora 66 k boost-graph x86_64 1.78.0-9.fc37 fedora 149 k boost-iostreams x86_64 1.78.0-9.fc37 fedora 42 k boost-json x86_64 1.78.0-9.fc37 fedora 111 k boost-locale x86_64 1.78.0-9.fc37 fedora 218 k boost-log x86_64 1.78.0-9.fc37 fedora 483 k boost-math x86_64 1.78.0-9.fc37 fedora 204 k boost-nowide x86_64 1.78.0-9.fc37 fedora 21 k boost-numpy3 x86_64 1.78.0-9.fc37 fedora 30 k boost-program-options x86_64 1.78.0-9.fc37 fedora 107 k boost-python3 x86_64 1.78.0-9.fc37 fedora 96 k boost-random x86_64 1.78.0-9.fc37 fedora 26 k boost-regex x86_64 1.78.0-9.fc37 fedora 113 k boost-serialization x86_64 1.78.0-9.fc37 fedora 134 k boost-stacktrace x86_64 1.78.0-9.fc37 fedora 30 k boost-system x86_64 1.78.0-9.fc37 fedora 16 k boost-test x86_64 1.78.0-9.fc37 fedora 234 k boost-thread x86_64 1.78.0-9.fc37 fedora 59 k boost-timer x86_64 1.78.0-9.fc37 fedora 26 k boost-type_erasure x86_64 1.78.0-9.fc37 fedora 35 k boost-wave x86_64 1.78.0-9.fc37 fedora 204 k byte-buddy noarch 1.12.10-2.fc38 fedora 2.9 M byte-buddy-agent noarch 1.12.10-2.fc38 fedora 65 k cairo x86_64 1.17.6-2.fc37 fedora 676 k cairo-gobject x86_64 1.17.6-2.fc37 fedora 18 k cdparanoia-libs x86_64 10.2-40.fc38 copr_base 55 k clang-libs x86_64 15.0.4-1.fc38 fedora 21 M clang-resource-filesystem x86_64 15.0.4-1.fc38 fedora 13 k cliquer-libs x86_64 1.22-4.fc38 copr_base 38 k cmake-data noarch 3.25.0-0.6.rc4.fc38 fedora 2.2 M cmake-filesystem x86_64 3.25.0-0.6.rc4.fc38 fedora 16 k cmake-rpm-macros noarch 3.25.0-0.6.rc4.fc38 fedora 16 k coin-or-Cbc x86_64 2.10.5-10.fc38 copr_base 824 k coin-or-Cgl x86_64 0.60.3-7.fc38 copr_base 428 k coin-or-Clp x86_64 1.17.6-10.fc38 copr_base 928 k coin-or-CoinUtils x86_64 2.11.4-7.fc38 copr_base 478 k coin-or-Osi x86_64 0.108.6-6.fc38 copr_base 317 k coin-or-Sample noarch 1.2.12-6.fc38 copr_base 171 k copy-jdk-configs noarch 4.1-1.fc38 fedora 28 k cpp x86_64 12.2.1-3.fc38 fedora 11 M crypto-policies-scripts noarch 20221110-1.git87a75f4.fc38 fedora 116 k cups-libs x86_64 1:2.4.2-5.fc38 copr_base 266 k dbus-libs x86_64 1:1.14.4-1.fc38 copr_base 156 k dejavu-sans-fonts noarch 2.37-19.fc38 copr_base 1.3 M emacs-filesystem noarch 1:28.1-3.fc37 fedora 9.5 k expat x86_64 2.4.8-2.fc38 copr_base 110 k flexiblas x86_64 3.2.1-2.fc38 copr_base 33 k flexiblas-netlib x86_64 3.2.1-2.fc38 copr_base 3.1 M flexiblas-openblas-openmp x86_64 3.2.1-2.fc38 copr_base 18 k fontconfig x86_64 2.14.1-1.fc38 copr_base 281 k fonts-filesystem noarch 1:2.0.5-9.fc38 fedora 7.8 k freetype x86_64 2.12.1-3.fc38 copr_base 407 k fribidi x86_64 1.0.12-2.fc38 copr_base 89 k gc x86_64 8.2.2-1.fc38 copr_base 110 k gcc x86_64 12.2.1-3.fc38 fedora 33 M gcc-gfortran x86_64 12.2.1-3.fc38 fedora 12 M gcc-plugin-annobin x86_64 12.2.1-3.fc38 fedora 53 k gd x86_64 2.3.3-8.fc38 copr_base 138 k gdk-pixbuf2 x86_64 2.42.10-1.fc38 fedora 485 k gecode x86_64 6.2.0-10.fc38 copr_base 3.2 M ghostscript x86_64 9.56.1-5.fc38 copr_base 38 k ghostscript-tools-fonts x86_64 9.56.1-5.fc38 copr_base 13 k ghostscript-tools-printing x86_64 9.56.1-5.fc38 copr_base 13 k glib2 x86_64 2.74.1-2.fc38 fedora 2.7 M glibc-devel x86_64 2.36.9000-13.fc38 fedora 42 k glibc-headers-x86 noarch 2.36.9000-13.fc38 fedora 520 k glpk x86_64 5.0-5.fc38 copr_base 384 k glx-utils x86_64 8.4.0-14.20210504git0f9e7d9.fc38 copr_base 41 k gnuplot-common x86_64 5.4.5-1.fc38 copr_base 780 k gnutls x86_64 3.7.8-9.fc38 fedora 1.1 M google-droid-sans-fonts noarch 20200215-13.fc37 fedora 2.7 M google-noto-fonts-common noarch 20201206^1.git0c78c8329-5.fc38 fedora 18 k google-noto-sans-vf-fonts noarch 20201206^1.git0c78c8329-5.fc38 fedora 728 k graphene x86_64 1.10.6-4.fc37 fedora 62 k graphite2 x86_64 1.3.14-10.fc37 fedora 95 k groff-base x86_64 1.22.4-10.fc38 copr_base 1.0 M gsl x86_64 2.7.1-2.fc38 copr_base 1.1 M gstreamer1 x86_64 1.20.4-1.fc38 fedora 1.4 M gstreamer1-plugins-base x86_64 1.20.4-1.fc38 fedora 2.2 M gts x86_64 0.7.6-42.20121130.fc38 copr_base 236 k guile22 x86_64 2.2.7-6.fc38 copr_base 6.4 M harfbuzz x86_64 5.3.1-1.fc38 copr_base 811 k hdf5 x86_64 1.12.1-10.fc38 copr_base 2.3 M hwdata noarch 0.364-1.fc38 copr_base 1.5 M hyphen x86_64 2.8.8-18.fc38 copr_base 29 k iso-codes noarch 4.12.0-1.fc38 fedora 3.5 M jacop noarch 4.8-9.fc37 fedora 1.7 M java-17-openjdk-headless x86_64 1:17.0.6.0.1-0.1.ea.fc38 fedora 42 M java-diff-utils noarch 4.12-1.fc37 fedora 78 k javapackages-filesystem noarch 6.1.0-5.fc38 copr_base 13 k javapackages-tools noarch 6.1.0-5.fc38 copr_base 33 k jbig2dec-libs x86_64 0.19-7.fc38 copr_base 74 k jbigkit-libs x86_64 2.1-24.fc37 fedora 53 k jline-builtins noarch 3.21.0-6.fc37 fedora 261 k jline-reader noarch 3.21.0-6.fc37 fedora 171 k jline-style noarch 3.21.0-6.fc37 fedora 35 k jline-terminal noarch 3.21.0-6.fc37 fedora 281 k jline-terminal-jna noarch 3.21.0-6.fc37 fedora 66 k jna x86_64 5.12.1-2.fc38 copr_base 287 k json-glib x86_64 1.6.6-3.fc37 fedora 162 k jsoncpp x86_64 1.9.5-3.fc37 fedora 98 k kernel-headers x86_64 6.1.0-0.rc4.git0.1.fc38 fedora 1.5 M langpacks-core-font-en noarch 3.0-26.fc37 fedora 10 k lasi x86_64 1.1.3-9.fc37 fedora 54 k lcms2 x86_64 2.14-1.fc38 fedora 176 k libICE x86_64 1.0.10-9.fc38 copr_base 71 k libSM x86_64 1.2.3-11.fc38 copr_base 42 k libX11 x86_64 1.8.1-2.fc38 copr_base 648 k libX11-common noarch 1.8.1-2.fc38 copr_base 150 k libX11-devel x86_64 1.8.1-2.fc38 copr_base 939 k libX11-xcb x86_64 1.8.1-2.fc38 copr_base 12 k libXau x86_64 1.0.10-1.fc38 copr_base 32 k libXau-devel x86_64 1.0.10-1.fc38 copr_base 14 k libXaw x86_64 1.0.14-3.fc38 copr_base 204 k libXcomposite x86_64 0.4.5-8.fc38 copr_base 24 k libXdamage x86_64 1.1.5-8.fc38 copr_base 22 k libXdmcp x86_64 1.1.3-9.fc38 copr_base 35 k libXext x86_64 1.3.5-1.fc38 fedora 39 k libXfixes x86_64 6.0.0-4.fc38 copr_base 20 k libXfont2 x86_64 2.0.3-13.fc38 copr_base 143 k libXft x86_64 2.3.6-1.fc38 fedora 71 k libXi x86_64 1.8-3.fc38 copr_base 40 k libXmu x86_64 1.1.4-1.fc38 fedora 76 k libXpm x86_64 3.5.13-8.fc38 copr_base 59 k libXrandr x86_64 1.5.2-9.fc38 copr_base 28 k libXrender x86_64 0.9.11-1.fc38 fedora 27 k libXt x86_64 1.2.1-3.fc38 copr_base 181 k libXtst x86_64 1.2.4-1.fc38 fedora 20 k libXv x86_64 1.0.11-17.fc38 copr_base 19 k libXxf86vm x86_64 1.1.5-1.fc38 fedora 18 k libaec x86_64 1.0.6-3.fc37 fedora 41 k libaec-devel x86_64 1.0.6-3.fc37 fedora 12 k libaom x86_64 3.5.0-1.fc38 fedora 1.8 M libavif x86_64 0.11.1-1.fc38 fedora 82 k libb2 x86_64 0.98.1-7.fc38 copr_base 25 k libcerf x86_64 2.1-2.fc37 fedora 39 k libdatrie x86_64 0.2.13-4.fc38 copr_base 32 k libdav1d x86_64 1.0.0-2.fc37 fedora 584 k libdrm x86_64 2.4.114-1.fc38 fedora 159 k libedit x86_64 3.1-43.20221009cvs.fc38 copr_base 106 k libevdev x86_64 1.13.0-1.fc37 fedora 44 k libfontenc x86_64 1.1.6-1.fc38 fedora 32 k libgfortran x86_64 12.2.1-3.fc38 fedora 900 k libglvnd x86_64 1:1.5.0-1.fc38 copr_base 133 k libglvnd-core-devel x86_64 1:1.5.0-1.fc38 copr_base 18 k libglvnd-devel x86_64 1:1.5.0-1.fc38 copr_base 156 k libglvnd-egl x86_64 1:1.5.0-1.fc38 copr_base 36 k libglvnd-gles x86_64 1:1.5.0-1.fc38 copr_base 32 k libglvnd-glx x86_64 1:1.5.0-1.fc38 copr_base 140 k libglvnd-opengl x86_64 1:1.5.0-1.fc38 copr_base 43 k libgs x86_64 9.56.1-5.fc38 copr_base 3.5 M libgudev x86_64 237-3.fc37 fedora 35 k libicu x86_64 71.1-2.fc38 copr_base 10 M libicu-devel x86_64 71.1-2.fc38 copr_base 842 k libijs x86_64 0.35-16.fc38 copr_base 30 k libimagequant x86_64 2.17.0-3.fc38 copr_base 63 k libinput x86_64 1.21.0-3.fc38 fedora 209 k libjpeg-turbo x86_64 2.1.4-1.fc38 fedora 181 k libmpc x86_64 1.2.1-5.fc38 copr_base 61 k libnauty x86_64 2.7.4-2.fc38 copr_base 596 k libogg x86_64 2:1.3.5-4.fc38 copr_base 33 k libpaper x86_64 1.1.28-5.fc38 copr_base 41 k libpciaccess x86_64 0.16-7.fc38 copr_base 27 k libpng x86_64 2:1.6.37-13.fc38 copr_base 119 k libquadmath x86_64 12.2.1-3.fc38 fedora 201 k libquadmath-devel x86_64 12.2.1-3.fc38 fedora 42 k librsvg2 x86_64 2.54.5-1.fc38 copr_base 3.6 M libstdc++-devel x86_64 12.2.1-3.fc38 fedora 2.5 M libstemmer x86_64 2.2.0-4.fc38 copr_base 170 k libsvm x86_64 3.30-1.fc38 copr_base 329 k libthai x86_64 0.1.29-3.fc38 copr_base 213 k libtheora x86_64 1:1.1.1-32.fc38 copr_base 167 k libtiff x86_64 4.4.0-4.fc38 copr_base 198 k libtool-ltdl x86_64 2.4.7-2.fc37 fedora 37 k libunwind x86_64 1.6.2-5.fc38 copr_base 68 k libuv x86_64 1:1.44.2-2.fc38 copr_base 152 k libvisual x86_64 1:0.4.0-36.fc38 copr_base 143 k libvmaf x86_64 2.3.0-4.fc37 fedora 180 k libvorbis x86_64 1:1.3.7-6.fc38 copr_base 196 k libvpx x86_64 1.12.0-1.fc38 copr_base 1.1 M libwacom x86_64 2.4.0-1.fc37 fedora 42 k libwacom-data noarch 2.4.0-1.fc37 fedora 180 k libwayland-client x86_64 1.21.0-1.fc37 fedora 33 k libwayland-cursor x86_64 1.21.0-1.fc37 fedora 19 k libwayland-egl x86_64 1.21.0-1.fc37 fedora 13 k libwayland-server x86_64 1.21.0-1.fc37 fedora 41 k libwebp x86_64 1.2.4-2.fc38 fedora 278 k libxcb x86_64 1.13.1-10.fc38 copr_base 227 k libxcb-devel x86_64 1.13.1-10.fc38 copr_base 1.0 M libxcrypt-devel x86_64 4.4.30-3.fc38 fedora 29 k libxkbcommon x86_64 1.4.1-2.fc37 fedora 140 k libxkbcommon-x11 x86_64 1.4.1-2.fc37 fedora 22 k libxkbfile x86_64 1.1.1-1.fc38 fedora 90 k libxshmfence x86_64 1.3-11.fc38 copr_base 12 k libxslt x86_64 1.1.37-1.fc38 copr_base 185 k lksctp-tools x86_64 1.0.19-2.fc38 copr_base 92 k llvm-libs x86_64 15.0.4-1.fc38 fedora 25 M lua x86_64 5.4.4-6.fc38 copr_base 189 k lua-filesystem x86_64 1.8.0-7.fc38 copr_base 35 k lua-json noarch 1.3.4-2.fc38 copr_base 26 k lua-lpeg x86_64 1.0.2-9.fc38 copr_base 67 k lua-posix x86_64 35.1-4.fc37 fedora 139 k lua-term x86_64 0.07-16.fc37 fedora 15 k m4 x86_64 1.4.19-4.fc37 fedora 303 k mailcap noarch 2.1.53-4.fc38 copr_base 33 k mesa-libEGL x86_64 22.3.0~rc2-2.fc38 fedora 131 k mesa-libEGL-devel x86_64 22.3.0~rc2-2.fc38 fedora 21 k mesa-libGL x86_64 22.3.0~rc2-2.fc38 fedora 177 k mesa-libGLU x86_64 9.0.1-7.fc38 copr_base 154 k mesa-libgbm x86_64 22.3.0~rc2-2.fc38 fedora 45 k mesa-libglapi x86_64 22.3.0~rc2-2.fc38 fedora 54 k metis x86_64 5.1.0-33.fc38 copr_base 573 k mkfontscale x86_64 1.2.2-2.fc38 copr_base 32 k mockito noarch 3.12.4-5.fc38 fedora 583 k mp x86_64 3.1.0-40.20200303git7fd4828.fc38 fedora 964 k mpdecimal x86_64 2.5.1-4.fc38 copr_base 102 k mtdev x86_64 1.1.6-4.fc38 copr_base 21 k ncurses x86_64 6.3-3.20220501.fc38 copr_base 404 k ncurses-c++-libs x86_64 6.3-3.20220501.fc38 copr_base 37 k ncurses-devel x86_64 6.3-3.20220501.fc38 copr_base 520 k netpbm x86_64 11.00.00-1.fc38 copr_base 185 k nettle x86_64 3.8-2.fc38 copr_base 414 k nspr x86_64 4.35.0-1.fc38 copr_base 137 k nss x86_64 3.83.0-1.fc38 copr_base 696 k nss-softokn x86_64 3.83.0-1.fc38 copr_base 1.0 M nss-softokn-freebl x86_64 3.83.0-1.fc38 copr_base 326 k nss-sysinit x86_64 3.83.0-1.fc38 copr_base 20 k nss-util x86_64 3.83.0-1.fc38 copr_base 88 k objectweb-asm noarch 9.3-4.fc38 fedora 354 k objenesis noarch 3.3-1.fc38 fedora 115 k openblas x86_64 0.3.21-3.fc38 copr_base 36 k openblas-openmp x86_64 0.3.21-3.fc38 copr_base 5.1 M openjpeg2 x86_64 2.5.0-2.fc38 copr_base 178 k opentest4j noarch 1.2.0-11.fc38 fedora 24 k opus x86_64 1.3.1-11.fc38 copr_base 205 k orc x86_64 0.4.33-1.fc38 fedora 204 k pango x86_64 1.50.11-1.fc38 fedora 342 k pciutils-libs x86_64 3.8.0-2.fc38 copr_base 42 k pcre2-utf16 x86_64 10.40-1.fc38.1 copr_base 216 k percolator-data noarch 3.05-10.fc38 copr_base 2.1 M perl-Authen-SASL noarch 2.16-28.fc38 copr_base 52 k perl-AutoLoader noarch 5.74-492.fc38 copr_base 25 k perl-B x86_64 1.83-492.fc38 copr_base 185 k perl-B-Hooks-EndOfScope noarch 0.26-4.fc38 copr_base 39 k perl-Business-ISBN noarch 3.007-4.fc38 copr_base 33 k perl-Business-ISBN-Data noarch 20210112.006-6.fc38 copr_base 36 k perl-Business-ISMN noarch 1.202-6.fc38 copr_base 26 k perl-Business-ISSN noarch 1.005-3.fc38 copr_base 19 k perl-Carp noarch 1.52-489.fc38 copr_base 29 k perl-Class-Accessor noarch 0.51-16.fc38 copr_base 29 k perl-Class-Data-Inheritable noarch 0.09-4.fc38 copr_base 14 k perl-Class-Inspector noarch 1.36-11.fc38 copr_base 31 k perl-Class-Method-Modifiers noarch 2.13-13.fc38 copr_base 44 k perl-Class-Singleton noarch 1.6-7.fc38 copr_base 27 k perl-Class-Struct noarch 0.66-492.fc38 copr_base 26 k perl-Clone x86_64 0.46-1.fc38 copr_base 23 k perl-Compress-Raw-Bzip2 x86_64 2.201-2.fc38 copr_base 35 k perl-Compress-Raw-Zlib x86_64 2.202-3.fc38 copr_base 64 k perl-Convert-ASN1 noarch 0.33-4.fc38 copr_base 60 k perl-Data-Compare noarch 1.27-10.fc38 copr_base 35 k perl-Data-Dump noarch 1.25-5.fc38 copr_base 34 k perl-Data-Dumper x86_64 2.184-490.fc38 copr_base 57 k perl-Data-OptList noarch 0.112-5.fc38 copr_base 27 k perl-Data-Uniqid noarch 0.12-29.fc38 copr_base 13 k perl-Date-ISO8601 noarch 0.005-16.fc37 fedora 20 k perl-Date-Manip noarch 6.89-1.fc38 copr_base 1.0 M perl-DateTime x86_64 2:1.59-1.fc38 copr_base 130 k perl-DateTime-Calendar-Julian noarch 0.107-3.fc38 copr_base 24 k perl-DateTime-Format-Builder noarch 0.8300-8.fc38 copr_base 86 k perl-DateTime-Format-Strptime noarch 1:1.79-6.fc38 copr_base 42 k perl-DateTime-Locale noarch 1.37-1.fc38 copr_base 3.0 M perl-DateTime-TimeZone noarch 2.56-1.fc38 copr_base 342 k perl-DateTime-TimeZone-SystemV noarch 0.010-17.fc37 fedora 24 k perl-DateTime-TimeZone-Tzfile noarch 0.011-17.fc37 fedora 20 k perl-Devel-CallChecker x86_64 0.008-17.fc37 fedora 23 k perl-Devel-Caller x86_64 2.06-29.fc38 copr_base 19 k perl-Devel-GlobalDestruction noarch 0.14-19.fc38 copr_base 18 k perl-Devel-LexAlias x86_64 0.05-30.fc38 copr_base 17 k perl-Devel-StackTrace noarch 1:2.04-13.fc38 copr_base 31 k perl-Digest noarch 1.20-489.fc38 copr_base 26 k perl-Digest-HMAC noarch 1.04-6.fc38 copr_base 23 k perl-Digest-MD5 x86_64 2.58-489.fc38 copr_base 36 k perl-Digest-SHA x86_64 1:6.03-1.fc38 copr_base 63 k perl-Dist-CheckConflicts noarch 0.11-26.fc38 copr_base 24 k perl-DynaLoader x86_64 1.52-492.fc38 copr_base 29 k perl-DynaLoader-Functions noarch 0.003-16.fc37 fedora 19 k perl-Email-Date-Format noarch 1.005-23.fc38 copr_base 19 k perl-Encode x86_64 4:3.19-492.fc38 copr_base 1.7 M perl-Encode-Locale noarch 1.05-24.fc38 copr_base 19 k perl-English noarch 1.11-492.fc38 copr_base 17 k perl-Errno x86_64 1.36-492.fc38 copr_base 18 k perl-Eval-Closure noarch 0.14-19.fc38 copr_base 24 k perl-Exception-Class noarch 1.45-6.fc38 copr_base 45 k perl-Exporter noarch 5.77-489.fc38 copr_base 32 k perl-ExtUtils-MM-Utils noarch 2:7.64-490.fc38 copr_base 12 k perl-Fcntl x86_64 1.15-492.fc38 copr_base 24 k perl-File-Basename noarch 2.85-492.fc38 copr_base 21 k perl-File-Compare noarch 1.100.700-492.fc38 copr_base 17 k perl-File-Copy noarch 2.39-492.fc38 copr_base 23 k perl-File-Find noarch 1.40-492.fc38 copr_base 29 k perl-File-Find-Rule noarch 0.34-22.fc38 copr_base 33 k perl-File-Listing noarch 6.15-3.fc38 copr_base 25 k perl-File-Path noarch 2.18-489.fc38 copr_base 36 k perl-File-ShareDir noarch 1.118-7.fc38 copr_base 30 k perl-File-Slurper noarch 0.013-4.fc38 copr_base 22 k perl-File-Temp noarch 1:0.231.100-489.fc38 copr_base 60 k perl-File-stat noarch 1.12-492.fc38 copr_base 21 k perl-FileHandle noarch 2.03-492.fc38 copr_base 19 k perl-Filter x86_64 2:1.64-1.fc38 copr_base 82 k perl-FindBin noarch 1.53-492.fc38 copr_base 17 k perl-GSSAPI x86_64 0.28-40.fc38 copr_base 57 k perl-Getopt-Long noarch 1:2.52-489.fc38 copr_base 60 k perl-Getopt-Std noarch 1.13-492.fc38 copr_base 19 k perl-HTML-Parser x86_64 3.80-1.fc38 fedora 126 k perl-HTML-Tagset noarch 3.20-52.fc38 copr_base 19 k perl-HTTP-Cookies noarch 6.10-7.fc38 copr_base 38 k perl-HTTP-Date noarch 6.05-10.fc38 copr_base 24 k perl-HTTP-Message noarch 6.44-1.fc38 copr_base 100 k perl-HTTP-Negotiate noarch 6.01-33.fc38 copr_base 20 k perl-HTTP-Tiny noarch 0.082-1.fc38 copr_base 56 k perl-Hash-Util-FieldHash x86_64 1.26-492.fc38 copr_base 42 k perl-I18N-LangTags noarch 0.45-492.fc38 copr_base 58 k perl-I18N-Langinfo x86_64 0.21-492.fc38 copr_base 26 k perl-IO x86_64 1.50-492.fc38 copr_base 90 k perl-IO-Compress noarch 2.201-3.fc38 copr_base 263 k perl-IO-HTML noarch 1.004-9.fc38 copr_base 28 k perl-IO-Socket-IP noarch 0.41-490.fc38 copr_base 42 k perl-IO-Socket-SSL noarch 2.075-1.fc38 copr_base 217 k perl-IO-String noarch 1.08-46.fc38 copr_base 18 k perl-IPC-Cmd noarch 2:1.04-490.fc38 copr_base 40 k perl-IPC-Open3 noarch 1.22-492.fc38 copr_base 26 k perl-IPC-Run3 noarch 0.048-26.fc38 copr_base 40 k perl-IPC-SysV x86_64 2.09-490.fc38 copr_base 42 k perl-IPC-System-Simple noarch 1.30-9.fc38 copr_base 39 k perl-JSON noarch 4.10-1.fc38 copr_base 97 k perl-LDAP noarch 1:0.68-8.fc38 copr_base 378 k perl-LWP-MediaTypes noarch 6.04-12.fc38 copr_base 34 k perl-LWP-Protocol-https noarch 6.10-7.fc38 copr_base 22 k perl-Lingua-Translit noarch 0.29-2.fc38 copr_base 34 k perl-List-AllUtils noarch 0.19-7.fc38 copr_base 50 k perl-List-SomeUtils noarch 0.58-10.fc38 copr_base 46 k perl-List-UtilsBy noarch 0.12-3.fc37 fedora 29 k perl-Locale-Maketext noarch 1.32-1.fc38 copr_base 95 k perl-Locale-Maketext-Simple noarch 1:0.21-492.fc38 copr_base 21 k perl-Log-Dispatch noarch 2.70-8.fc38 copr_base 83 k perl-Log-Dispatch-FileRotate noarch 1.38-5.fc38 copr_base 33 k perl-Log-Log4perl noarch 1.57-1.fc38 copr_base 355 k perl-MIME-Base64 x86_64 3.16-489.fc38 copr_base 31 k perl-MIME-Charset noarch 1.013.1-1.fc38 copr_base 49 k perl-MIME-Lite noarch 3.033-5.fc38 copr_base 95 k perl-MIME-Types noarch 2.22-4.fc38 copr_base 71 k perl-MRO-Compat noarch 0.15-4.fc38 copr_base 26 k perl-Mail-Sender noarch 1:0.903-19.fc38 copr_base 52 k perl-Mail-Sendmail noarch 0.80-16.fc38 copr_base 37 k perl-MailTools noarch 2.21-12.fc38 copr_base 102 k perl-Math-BigInt noarch 1:1.9998.37-2.fc38 copr_base 202 k perl-Math-BigRat noarch 0.2624-2.fc38 copr_base 42 k perl-Math-Complex noarch 1.59-492.fc38 copr_base 50 k perl-Module-CoreList noarch 1:5.20221020-1.fc38 copr_base 85 k perl-Module-Implementation noarch 0.09-35.fc38 copr_base 20 k perl-Module-Load noarch 1:0.36-489.fc38 copr_base 18 k perl-Module-Load-Conditional noarch 0.74-489.fc38 copr_base 23 k perl-Module-Metadata noarch 1.000037-489.fc38 copr_base 36 k perl-Module-Runtime noarch 0.016-16.fc38 copr_base 23 k perl-Mozilla-CA noarch 20211001-5.fc38 fedora 12 k perl-NTLM noarch 1.09-33.fc38 copr_base 22 k perl-Net-HTTP noarch 6.22-3.fc38 copr_base 40 k perl-Net-SMTP-SSL noarch 1.04-19.fc38 copr_base 12 k perl-Net-SSLeay x86_64 1.92-4.fc38 copr_base 343 k perl-Number-Compare noarch 0.03-33.fc38 copr_base 12 k perl-Opcode x86_64 1.57-492.fc38 copr_base 40 k perl-POSIX x86_64 2.03-492.fc38 copr_base 101 k perl-Package-Generator noarch 1.106-26.fc38 copr_base 24 k perl-Package-Stash noarch 0.40-3.fc38 copr_base 34 k perl-Package-Stash-XS x86_64 0.30-2.fc38 copr_base 36 k perl-PadWalker x86_64 2.5-7.fc38 copr_base 27 k perl-Params-Check noarch 1:0.38-489.fc38 copr_base 22 k perl-Params-Classify x86_64 0.015-17.fc37 fedora 32 k perl-Params-Util x86_64 1.102-8.fc38 copr_base 34 k perl-Params-Validate x86_64 1.31-1.fc38 fedora 70 k perl-Params-ValidationCompiler noarch 0.30-17.fc38 copr_base 38 k perl-Parse-RecDescent noarch 1.967015-18.fc38 copr_base 197 k perl-PathTools x86_64 3.84-489.fc38 copr_base 85 k perl-Pod-Escapes noarch 1:1.07-489.fc38 copr_base 20 k perl-Pod-Html noarch 1.33-492.fc38 copr_base 35 k perl-Pod-Perldoc noarch 3.28.01-490.fc38 copr_base 84 k perl-Pod-Simple noarch 1:3.43-490.fc38 copr_base 216 k perl-Pod-Usage noarch 4:2.03-3.fc38 copr_base 41 k perl-Ref-Util noarch 0.204-15.fc38 copr_base 24 k perl-Ref-Util-XS x86_64 0.117-16.fc38 copr_base 24 k perl-Regexp-Common noarch 2017060201-19.fc38 copr_base 181 k perl-Role-Tiny noarch 2.002004-7.fc38 copr_base 33 k perl-Safe noarch 2.43-492.fc38 copr_base 28 k perl-Scalar-List-Utils x86_64 5:1.63-489.fc38 copr_base 73 k perl-SelectSaver noarch 1.02-492.fc38 copr_base 15 k perl-Socket x86_64 4:2.036-1.fc38 copr_base 56 k perl-Sort-Key x86_64 1.33-25.fc38 copr_base 47 k perl-Specio noarch 0.48-2.fc38 copr_base 152 k perl-Storable x86_64 1:3.26-489.fc38 copr_base 97 k perl-Sub-Exporter noarch 0.988-5.fc38 copr_base 72 k perl-Sub-Exporter-Progressive noarch 0.001013-19.fc38 copr_base 21 k perl-Sub-Identify x86_64 0.14-20.fc38 copr_base 24 k perl-Sub-Install noarch 0.928-33.fc38 copr_base 23 k perl-Symbol noarch 1.09-492.fc38 copr_base 18 k perl-Sys-Hostname x86_64 1.24-492.fc38 copr_base 21 k perl-Sys-Syslog x86_64 0.36-490.fc38 copr_base 47 k perl-Term-ANSIColor noarch 5.01-490.fc38 copr_base 48 k perl-Term-Cap noarch 1.17-489.fc38 copr_base 22 k perl-Text-Balanced noarch 2.06-2.fc38 copr_base 50 k perl-Text-BibTeX x86_64 0.88-12.fc37 fedora 271 k perl-Text-CSV noarch 2.02-1.fc38 copr_base 115 k perl-Text-Glob noarch 0.11-18.fc38 copr_base 14 k perl-Text-ParseWords noarch 3.31-489.fc38 copr_base 17 k perl-Text-Roman noarch 3.5-23.fc38 copr_base 23 k perl-Text-Soundex x86_64 3.05-24.fc38 fedora 30 k perl-Text-Tabs+Wrap noarch 2021.0814-489.fc38 copr_base 23 k perl-Text-Unidecode noarch 1.30-19.fc38 copr_base 139 k perl-Thread-Queue noarch 3.14-489.fc38 copr_base 22 k perl-Tie noarch 4.6-492.fc38 copr_base 35 k perl-Tie-Cycle noarch 1.227-4.fc38 copr_base 19 k perl-Tie-RefHash noarch 1.40-489.fc38 copr_base 23 k perl-Time-HiRes x86_64 4:1.9770-489.fc38 copr_base 58 k perl-Time-Local noarch 2:1.300-489.fc38 copr_base 34 k perl-TimeDate noarch 1:2.33-9.fc38 copr_base 51 k perl-Try-Tiny noarch 0.31-4.fc38 copr_base 38 k perl-URI noarch 5.17-1.fc38 fedora 123 k perl-Unicode-Collate x86_64 1.31-489.fc38 copr_base 734 k perl-Unicode-LineBreak x86_64 2019.001-14.fc38 copr_base 117 k perl-Unicode-Normalize x86_64 1.31-489.fc38 copr_base 95 k perl-Unicode-UCD noarch 0.78-492.fc38 copr_base 82 k perl-Variable-Magic x86_64 0.63-1.fc38 copr_base 54 k perl-WWW-RobotRules noarch 6.02-33.fc38 copr_base 20 k perl-XML-LibXML x86_64 1:2.0208-1.fc38 copr_base 347 k perl-XML-LibXML-Simple noarch 1.01-10.fc38 copr_base 33 k perl-XML-LibXSLT x86_64 2.002.000-3.fc38 copr_base 65 k perl-XML-NamespaceSupport noarch 1.12-18.fc38 copr_base 26 k perl-XML-Parser x86_64 2.46-12.fc38 copr_base 228 k perl-XML-SAX noarch 1.02-11.fc38 copr_base 59 k perl-XML-SAX-Base noarch 1.09-18.fc38 copr_base 33 k perl-XML-Writer noarch 0.900-9.fc38 copr_base 34 k perl-XML-XPath noarch 1.48-2.fc38 copr_base 84 k perl-XString x86_64 0.005-7.fc38 copr_base 24 k perl-autodie noarch 2.34-490.fc38 copr_base 95 k perl-autovivification x86_64 0.18-17.fc38 copr_base 33 k perl-base noarch 2.27-492.fc38 copr_base 20 k perl-constant noarch 1.33-490.fc38 copr_base 23 k perl-deprecate noarch 0.04-492.fc38 copr_base 18 k perl-encoding x86_64 4:3.00-492.fc38 copr_base 64 k perl-if noarch 0.61.000-492.fc38 copr_base 17 k perl-interpreter x86_64 4:5.36.0-492.fc38 copr_base 76 k perl-lib x86_64 0.65-492.fc38 copr_base 18 k perl-libnet noarch 3.14-490.fc38 copr_base 127 k perl-libs x86_64 4:5.36.0-492.fc38 copr_base 2.1 M perl-libwww-perl noarch 6.67-3.fc38 copr_base 203 k perl-locale noarch 1.10-492.fc38 copr_base 17 k perl-meta-notation noarch 5.36.0-492.fc38 copr_base 13 k perl-mro x86_64 1.26-492.fc38 copr_base 32 k perl-namespace-autoclean noarch 0.29-13.fc38 copr_base 26 k perl-namespace-clean noarch 0.27-21.fc38 copr_base 30 k perl-open noarch 1.13-492.fc38 copr_base 20 k perl-overload noarch 1.35-492.fc38 copr_base 49 k perl-overloading noarch 0.02-492.fc38 copr_base 16 k perl-parent noarch 1:0.238-489.fc38 copr_base 14 k perl-podlators noarch 1:4.14-489.fc38 copr_base 112 k perl-sigtrap noarch 1.10-492.fc38 copr_base 19 k perl-subs noarch 1.04-492.fc38 copr_base 15 k perl-threads x86_64 1:2.27-489.fc38 copr_base 58 k perl-threads-shared x86_64 1.64-489.fc38 copr_base 45 k perl-vars noarch 1.05-492.fc38 copr_base 16 k perl-version x86_64 8:0.99.29-490.fc38 copr_base 63 k perltidy noarch 20221112-1.fc38 fedora 673 k pixman x86_64 0.40.0-6.fc37 fedora 277 k poppler x86_64 22.08.0-3.fc38 copr_base 1.2 M poppler-data noarch 0.4.11-3.fc38 copr_base 2.0 M poppler-glib x86_64 22.08.0-3.fc38 copr_base 176 k procps-ng x86_64 3.3.17-8.fc38 copr_base 330 k python-pip-wheel noarch 22.2.2-2.fc38 fedora 1.4 M python-setuptools-wheel noarch 65.5.1-1.fc38 fedora 715 k python3 x86_64 3.11.0-1.fc38 copr_base 28 k python3-libs x86_64 3.11.0-1.fc38 copr_base 9.3 M python3-numpy x86_64 1:1.23.4-1.fc38 fedora 7.6 M qt-settings noarch 37.0-1.fc38 fedora 11 k qt5-qtbase x86_64 5.15.7-1.fc38 copr_base 3.5 M qt5-qtbase-common noarch 5.15.7-1.fc38 copr_base 12 k qt5-qtbase-gui x86_64 5.15.7-1.fc38 copr_base 6.4 M qt5-qtdeclarative x86_64 5.15.7-1.fc38 copr_base 4.2 M qt5-qtdeclarative-devel x86_64 5.15.7-1.fc38 copr_base 1.3 M qt5-qtlocation x86_64 5.15.7-1.fc38 copr_base 3.0 M qt5-qtlocation-devel x86_64 5.15.7-1.fc38 copr_base 146 k qt5-qtsensors x86_64 5.15.7-1.fc38 copr_base 223 k qt5-qtsvg x86_64 5.15.7-1.fc38 copr_base 186 k qt5-qttools-common noarch 5.15.7-1.fc38 copr_base 11 k qt5-qttools-libs-designer x86_64 5.15.7-1.fc38 copr_base 2.7 M qt5-qtwebchannel x86_64 5.15.7-1.fc38 copr_base 100 k qt5-qtwebchannel-devel x86_64 5.15.7-1.fc38 copr_base 23 k qt5-qtwebengine x86_64 5.15.10-3.fc38 copr_base 53 M qt5-qtwebengine-devtools x86_64 5.15.10-3.fc38 copr_base 1.9 M qt5-qtwebkit x86_64 5.212.0-0.70alpha4.fc38 copr_base 13 M qt5-qtx11extras x86_64 5.15.7-1.fc38 copr_base 35 k qt5-rpm-macros noarch 5.15.7-1.fc38 fedora 9.7 k re2 x86_64 1:20211101-3.fc36 fedora 196 k readline-devel x86_64 8.2-2.fc38 copr_base 199 k rhash x86_64 1.4.3-1.fc38 copr_base 194 k scala noarch 2.13.10-1.fc38 fedora 10 M scala-library noarch 2.13.10-1.fc38 fedora 5.0 M scala-reflect noarch 2.13.10-1.fc38 fedora 3.2 M scotch x86_64 6.1.2-3.fc38 copr_base 387 k shared-mime-info x86_64 2.2-2.fc38 copr_base 382 k snappy x86_64 1.1.9-5.fc38 copr_base 36 k sombok x86_64 2.4.0-17.fc38 copr_base 48 k sqlite x86_64 3.39.4-1.fc38 copr_base 800 k suitesparse x86_64 5.13.0-1.fc38 copr_base 1.1 M svt-av1-libs x86_64 1.3.0-1.fc38 fedora 2.1 M tbb x86_64 2020.3-12.fc38 copr_base 170 k tcl x86_64 1:8.6.12-3.fc38 copr_base 1.1 M teckit x86_64 2.5.9-9.fc38 copr_base 434 k texlive-ae noarch 9:svn15878.1.4-61.fc38 fedora 116 k texlive-algorithms noarch 9:svn42428-61.fc38 fedora 24 k texlive-alphalph noarch 9:svn53087-61.fc38 fedora 361 k texlive-amscls noarch 9:svn55378-61.fc38 fedora 1.1 M texlive-amsfonts noarch 9:svn29208.3.04-61.fc38 fedora 3.7 M texlive-amsmath noarch 9:svn56514-61.fc38 fedora 47 k texlive-anysize noarch 9:svn15878.0-61.fc38 fedora 13 k texlive-atbegshi noarch 9:svn53051-61.fc38 fedora 409 k texlive-attachfile noarch 9:svn42099-61.fc38 fedora 23 k texlive-attachfile2 noarch 9:20210325-52.fc38 copr_base 447 k texlive-atveryend noarch 9:svn53108-61.fc38 fedora 386 k texlive-auto-pst-pdf noarch 9:svn56596-61.fc38 fedora 17 k texlive-auxhook noarch 9:svn53173-61.fc38 fedora 295 k texlive-avantgar noarch 9:svn31835.0-61.fc38 fedora 323 k texlive-babel noarch 9:svn58999-61.fc38 fedora 444 k texlive-babel-english noarch 9:svn44495-61.fc38 fedora 21 k texlive-babelbib noarch 9:svn57349-61.fc38 fedora 55 k texlive-base x86_64 9:20210325-52.fc38 copr_base 2.3 M texlive-beamer noarch 9:svn58537-61.fc38 fedora 227 k texlive-bera noarch 9:svn20031.0-61.fc38 fedora 357 k texlive-beton noarch 9:svn15878.0-61.fc38 fedora 16 k texlive-biblatex noarch 9:svn63878-61.fc38 fedora 305 k texlive-bibtex x86_64 9:20210325-52.fc38 copr_base 447 k texlive-bidi noarch 9:svn55193-61.fc38 fedora 175 k texlive-bigintcalc noarch 9:svn53172-61.fc38 fedora 466 k texlive-bitset noarch 9:svn53837-61.fc38 fedora 621 k texlive-bookman noarch 9:svn31835.0-61.fc38 fedora 369 k texlive-bookmark noarch 9:svn56885-61.fc38 fedora 480 k texlive-booktabs noarch 9:svn53402-61.fc38 fedora 18 k texlive-breakurl noarch 9:svn29901.1.40-61.fc38 fedora 18 k texlive-breqn noarch 9:svn56422-61.fc38 fedora 43 k texlive-caption noarch 9:svn56771-61.fc38 fedora 50 k texlive-carlisle noarch 9:svn56753-61.fc38 fedora 24 k texlive-catchfile noarch 9:svn53084-61.fc38 fedora 308 k texlive-changepage noarch 9:svn15878.1.0c-61.fc38 fedora 20 k texlive-charter noarch 9:svn15878.0-61.fc38 fedora 207 k texlive-cite noarch 9:svn36428.5.5-61.fc38 fedora 32 k texlive-cm noarch 9:svn57963-61.fc38 fedora 323 k texlive-cm-super noarch 9:svn15878.0-61.fc38 fedora 62 M texlive-cmap noarch 9:svn57640-61.fc38 fedora 22 k texlive-cmextra noarch 9:svn57866-61.fc38 fedora 50 k texlive-collection-basic noarch 9:svn59159-61.fc38 fedora 12 k texlive-collection-fontsrecommended noarch 9:svn54074-61.fc38 fedora 12 k texlive-collection-latex noarch 9:svn57048-61.fc38 fedora 12 k texlive-collection-latexrecommended noarch 9:svn57862-61.fc38 fedora 13 k texlive-colorprofiles noarch 9:svn49086-61.fc38 fedora 147 k texlive-colortbl noarch 9:svn53545-61.fc38 fedora 18 k texlive-courier noarch 9:svn35058.0-61.fc38 fedora 527 k texlive-crop noarch 9:svn55424-61.fc38 fedora 19 k texlive-csquotes noarch 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9:svn42428-61.fc38 fedora 18 k texlive-euro noarch 9:svn22191.1.1-61.fc38 fedora 17 k texlive-euro-ce noarch 9:svn25714-61.fc38 fedora 32 k texlive-eurosym noarch 9:svn17265.1.4_subrfix-61.fc38 fedora 157 k texlive-everysel noarch 9:svn57489-61.fc38 fedora 449 k texlive-everyshi noarch 9:svn57001-61.fc38 fedora 148 k texlive-extsizes noarch 9:svn17263.1.4a-61.fc38 fedora 28 k texlive-fancybox noarch 9:svn18304.1.4-61.fc38 fedora 23 k texlive-fancyhdr noarch 9:svn57672-61.fc38 fedora 20 k texlive-fancyref noarch 9:svn15878.0.9c-61.fc38 fedora 20 k texlive-fancyvrb noarch 9:svn57488-61.fc38 fedora 27 k texlive-filecontents noarch 9:svn52142-61.fc38 fedora 17 k texlive-filehook noarch 9:svn56479-61.fc38 fedora 23 k texlive-finstrut noarch 9:svn21719.0.5-61.fc38 fedora 21 k texlive-firstaid noarch 9:svn58440-61.fc38 fedora 219 k texlive-fix2col noarch 9:svn38770-61.fc38 fedora 17 k texlive-float noarch 9:svn15878.1.3d-61.fc38 fedora 17 k texlive-fontspec noarch 9:svn56594-61.fc38 fedora 45 k texlive-footmisc noarch 9:svn23330.5.5b-61.fc38 fedora 23 k texlive-footnotehyper noarch 9:svn57618-61.fc38 fedora 21 k texlive-fp noarch 9:svn49719-61.fc38 fedora 36 k texlive-fpl noarch 9:svn54512-61.fc38 fedora 303 k texlive-geometry noarch 9:svn54080-61.fc38 fedora 24 k texlive-gettitlestring noarch 9:svn53170-61.fc38 fedora 328 k texlive-glyphlist noarch 9:20210325-52.fc38 copr_base 38 k texlive-graphics noarch 9:svn56514-61.fc38 fedora 40 k texlive-graphics-cfg noarch 9:svn41448-61.fc38 fedora 13 k texlive-graphics-def noarch 9:svn58539-61.fc38 fedora 29 k texlive-grfext noarch 9:svn53024-61.fc38 fedora 318 k texlive-grffile noarch 9:svn52756-61.fc38 fedora 361 k texlive-gsftopk x86_64 9:20210325-52.fc38 copr_base 35 k texlive-helvetic noarch 9:svn31835.0-61.fc38 fedora 659 k texlive-hobsub noarch 9:svn52810-61.fc38 fedora 78 k texlive-hologo noarch 9:svn53048-61.fc38 fedora 563 k texlive-hopatch noarch 9:svn56106-61.fc38 fedora 313 k texlive-hycolor noarch 9:svn53584-61.fc38 fedora 384 k texlive-hyperref noarch 9:svn58024-61.fc38 fedora 120 k texlive-hyph-utf8 noarch 9:svn58619-61.fc38 fedora 30 k texlive-hyphen-base noarch 9:svn58630-61.fc38 fedora 34 k texlive-hyphenex noarch 9:svn57387-61.fc38 fedora 20 k texlive-ifmtarg noarch 9:svn47544-61.fc38 fedora 15 k texlive-ifplatform noarch 9:svn45533-61.fc38 fedora 17 k texlive-iftex noarch 9:svn56594-61.fc38 fedora 21 k texlive-index noarch 9:svn24099.4.1beta-61.fc38 fedora 23 k texlive-infwarerr noarch 9:svn53023-61.fc38 fedora 296 k texlive-intcalc noarch 9:svn53168-61.fc38 fedora 433 k texlive-jknapltx noarch 9:svn19440.0-61.fc38 fedora 27 k texlive-kastrup noarch 9:svn15878.0-61.fc38 fedora 13 k texlive-knuth-lib noarch 9:svn57963-61.fc38 fedora 53 k texlive-knuth-local noarch 9:svn57963-61.fc38 fedora 46 k texlive-koma-script noarch 9:svn58585-61.fc38 fedora 6.0 M texlive-kpathsea x86_64 9:20210325-52.fc38 copr_base 1.1 M texlive-kvdefinekeys noarch 9:svn53193-61.fc38 fedora 307 k texlive-kvoptions noarch 9:svn56609-61.fc38 fedora 481 k texlive-kvsetkeys noarch 9:svn53166-61.fc38 fedora 381 k texlive-l3backend noarch 9:svn59118-61.fc38 fedora 852 k texlive-l3experimental noarch 9:svn57789-61.fc38 fedora 43 k texlive-l3kernel noarch 9:svn59118-61.fc38 fedora 196 k texlive-l3packages noarch 9:svn59118-61.fc38 fedora 41 k texlive-latex noarch 9:20210325-52.fc38 copr_base 22 M texlive-latex-fonts noarch 9:svn28888.0-61.fc38 fedora 50 k texlive-latexbug noarch 9:svn58151-61.fc38 fedora 203 k texlive-latexconfig noarch 9:svn53525-61.fc38 fedora 16 k texlive-letltxmacro noarch 9:svn53022-61.fc38 fedora 300 k texlive-lib x86_64 9:20210325-52.fc38 copr_base 486 k texlive-lineno noarch 9:svn57866-61.fc38 fedora 76 k texlive-listings noarch 9:svn55265-61.fc38 fedora 167 k texlive-lm noarch 9:svn58637-61.fc38 fedora 12 M texlive-lm-math noarch 9:svn36915.1.959-61.fc38 fedora 448 k texlive-logreq noarch 9:svn53003-61.fc38 fedora 21 k texlive-ltabptch noarch 9:svn17533.1.74d-61.fc38 fedora 19 k texlive-ltxcmds noarch 9:svn56421-61.fc38 fedora 401 k texlive-ltxmisc noarch 9:svn21927.0-61.fc38 fedora 28 k texlive-lua-alt-getopt noarch 9:svn56414-61.fc38 fedora 13 k texlive-luabidi noarch 9:svn54512-61.fc38 fedora 20 k texlive-luahbtex x86_64 9:20210325-52.fc38 copr_base 2.0 M texlive-lualatex-math noarch 9:svn56541-61.fc38 fedora 21 k texlive-lualibs noarch 9:svn57277-61.fc38 fedora 151 k texlive-luaotfload noarch 9:20210325-52.fc38 copr_base 1.2 M texlive-luatex x86_64 9:20210325-52.fc38 copr_base 3.8 M texlive-luatexbase noarch 9:svn52663-61.fc38 fedora 17 k texlive-lwarp noarch 9:20210325-52.fc38 copr_base 3.2 M texlive-makecmds noarch 9:svn15878.0-61.fc38 fedora 16 k texlive-makeindex x86_64 9:20210325-52.fc38 copr_base 431 k texlive-manfnt-font noarch 9:svn54684-61.fc38 fedora 37 k texlive-marginnote noarch 9:svn48383-61.fc38 fedora 18 k texlive-marvosym noarch 9:svn29349.2.2a-61.fc38 fedora 147 k texlive-mathpazo noarch 9:svn52663-61.fc38 fedora 91 k texlive-mathspec noarch 9:svn42773-61.fc38 fedora 25 k texlive-mathtools noarch 9:svn58856-61.fc38 fedora 38 k texlive-mdwtools noarch 9:svn15878.1.05.4-61.fc38 fedora 36 k texlive-memoir noarch 9:svn58666-61.fc38 fedora 94 k texlive-metafont x86_64 9:20210325-52.fc38 copr_base 264 k texlive-metalogo noarch 9:svn18611.0.12-61.fc38 fedora 17 k texlive-mflogo noarch 9:svn42428-61.fc38 fedora 17 k texlive-mflogo-font noarch 9:svn54512-61.fc38 fedora 32 k texlive-mfnfss noarch 9:svn46036-61.fc38 fedora 18 k texlive-mfware x86_64 9:20210325-52.fc38 copr_base 101 k texlive-microtype noarch 9:svn58394-61.fc38 fedora 72 k texlive-minitoc noarch 9:svn48196-61.fc38 fedora 122 k texlive-mnsymbol noarch 9:svn18651.1.4-61.fc38 fedora 4.4 M texlive-modes noarch 9:svn56303-61.fc38 fedora 306 k texlive-mparhack noarch 9:svn59066-61.fc38 fedora 18 k texlive-mptopdf noarch 9:20210325-52.fc38 copr_base 52 k texlive-ms noarch 9:svn57473-61.fc38 fedora 18 k texlive-multido noarch 9:svn18302.1.42-61.fc38 fedora 18 k texlive-natbib noarch 9:svn20668.8.31b-61.fc38 fedora 32 k texlive-ncntrsbk noarch 9:svn31835.0-61.fc38 fedora 367 k texlive-newfloat noarch 9:svn52906-61.fc38 fedora 120 k texlive-notoccite noarch 9:svn18129.0-61.fc38 fedora 13 k texlive-ntgclass noarch 9:svn56959-61.fc38 fedora 35 k texlive-oberdiek noarch 9:20210325-52.fc38 copr_base 8.6 M texlive-pagesel noarch 9:svn56105-61.fc38 fedora 341 k texlive-palatino noarch 9:svn31835.0-61.fc38 fedora 428 k texlive-paralist noarch 9:svn43021-61.fc38 fedora 18 k texlive-parallel noarch 9:svn15878.0-61.fc38 fedora 18 k texlive-parskip noarch 9:svn58358-61.fc38 fedora 17 k texlive-pdfcolmk noarch 9:svn52912-61.fc38 fedora 19 k texlive-pdfescape noarch 9:svn53082-61.fc38 fedora 353 k texlive-pdflscape noarch 9:svn53047-61.fc38 fedora 308 k texlive-pdfmanagement-testphase noarch 9:svn59194-61.fc38 fedora 6.4 M texlive-pdfpages noarch 9:svn58212-61.fc38 fedora 32 k texlive-pdftex x86_64 9:20210325-52.fc38 copr_base 2.0 M texlive-pdftexcmds noarch 9:svn55777-61.fc38 fedora 391 k texlive-pgf noarch 9:svn57240-61.fc38 fedora 902 k texlive-picture noarch 9:svn54867-61.fc38 fedora 313 k texlive-placeins noarch 9:svn19848.2.2-61.fc38 fedora 14 k texlive-plain noarch 9:svn57963-61.fc38 fedora 49 k texlive-polyglossia noarch 9:svn58869-61.fc38 fedora 212 k texlive-psfrag noarch 9:svn15878.3.04-61.fc38 fedora 16 k texlive-pslatex noarch 9:svn57434-61.fc38 fedora 23 k texlive-psnfss noarch 9:svn54694-61.fc38 fedora 60 k texlive-pspicture noarch 9:svn15878.0-61.fc38 fedora 17 k texlive-pst-3d noarch 9:svn17257.1.10-61.fc38 fedora 19 k texlive-pst-coil noarch 9:svn37377.1.07-61.fc38 fedora 19 k texlive-pst-eps noarch 9:svn15878.1.0-61.fc38 fedora 18 k texlive-pst-fill noarch 9:svn15878.1.01-61.fc38 fedora 19 k texlive-pst-grad noarch 9:svn15878.1.06-61.fc38 fedora 19 k texlive-pst-math noarch 9:svn49425-61.fc38 fedora 21 k texlive-pst-node noarch 9:svn54687-61.fc38 fedora 41 k texlive-pst-ovl noarch 9:svn54963-61.fc38 fedora 17 k texlive-pst-plot noarch 9:svn54080-61.fc38 fedora 38 k texlive-pst-text noarch 9:svn49542-61.fc38 fedora 19 k texlive-pst-tools noarch 9:svn54518-61.fc38 fedora 21 k texlive-pst-tree noarch 9:svn43272-61.fc38 fedora 21 k texlive-pstricks noarch 9:svn58371-61.fc38 fedora 105 k texlive-pstricks-add noarch 9:svn53763-61.fc38 fedora 37 k texlive-pxfonts noarch 9:svn15878.0-61.fc38 fedora 524 k texlive-qstest noarch 9:svn15878.0-61.fc38 fedora 20 k texlive-ragged2e noarch 9:svn57638-61.fc38 fedora 664 k texlive-rcs noarch 9:svn15878.0-61.fc38 fedora 28 k texlive-realscripts noarch 9:svn56594-61.fc38 fedora 19 k texlive-refcount noarch 9:svn53164-61.fc38 fedora 335 k texlive-rerunfilecheck noarch 9:svn54841-61.fc38 fedora 324 k texlive-rsfs noarch 9:svn15878.0-61.fc38 fedora 74 k texlive-sansmath noarch 9:svn17997.1.1-61.fc38 fedora 15 k texlive-sansmathaccent noarch 9:svn53628-61.fc38 fedora 37 k texlive-sauerj noarch 9:svn15878.0-61.fc38 fedora 20 k texlive-scheme-basic noarch 9:svn54191-61.fc38 fedora 11 k texlive-section noarch 9:svn20180.0-61.fc38 fedora 24 k texlive-seminar noarch 9:svn34011.1.62-61.fc38 fedora 48 k texlive-sepnum noarch 9:svn20186.2.0-61.fc38 fedora 17 k texlive-setspace noarch 9:svn24881.6.7a-61.fc38 fedora 19 k texlive-showexpl noarch 9:svn57414-61.fc38 fedora 19 k texlive-soul noarch 9:svn56495-61.fc38 fedora 21 k texlive-stringenc noarch 9:svn52982-61.fc38 fedora 703 k texlive-subfig noarch 9:svn15878.1.3-61.fc38 fedora 22 k texlive-symbol noarch 9:svn31835.0-61.fc38 fedora 55 k texlive-tex x86_64 9:20210325-52.fc38 copr_base 210 k texlive-tex-gyre noarch 9:svn48058-61.fc38 fedora 8.0 M texlive-tex-gyre-math noarch 9:svn41264-61.fc38 fedora 1.4 M texlive-tex-ini-files noarch 9:svn40533-61.fc38 fedora 16 k texlive-texlive-common-doc noarch 9:svn54176-61.fc38 fedora 106 k texlive-texlive-en noarch 9:20210325-52.fc38 copr_base 1.9 M texlive-texlive-msg-translations noarch 9:svn59096-61.fc38 fedora 162 k texlive-texlive-scripts noarch 9:20210325-52.fc38 copr_base 106 k texlive-texlive.infra noarch 9:20210325-52.fc38 copr_base 281 k texlive-textcase noarch 9:svn52092-61.fc38 fedora 16 k texlive-thumbpdf noarch 9:20210325-52.fc38 copr_base 41 k texlive-times noarch 9:svn35058.0-61.fc38 fedora 371 k texlive-tipa noarch 9:svn29349.1.3-61.fc38 fedora 2.8 M texlive-titlesec noarch 9:svn52413-61.fc38 fedora 35 k texlive-tools noarch 9:svn56514-61.fc38 fedora 73 k texlive-translator noarch 9:svn56052-61.fc38 fedora 289 k texlive-transparent noarch 9:svn52981-61.fc38 fedora 277 k texlive-txfonts noarch 9:svn15878.0-61.fc38 fedora 817 k texlive-typehtml noarch 9:svn17134.0-61.fc38 fedora 21 k texlive-ucharcat noarch 9:svn38907-61.fc38 fedora 16 k texlive-ucs noarch 9:svn35853.2.2-61.fc38 fedora 383 k texlive-underscore noarch 9:svn18261.0-61.fc38 fedora 19 k texlive-unicode-data noarch 9:svn56768-61.fc38 fedora 360 k texlive-unicode-math noarch 9:svn56594-61.fc38 fedora 64 k texlive-uniquecounter noarch 9:svn53162-61.fc38 fedora 301 k texlive-url noarch 9:svn32528.3.4-61.fc38 fedora 20 k texlive-utopia noarch 9:svn15878.0-61.fc38 fedora 240 k texlive-varwidth noarch 9:svn24104.0.92-61.fc38 fedora 18 k texlive-wasy noarch 9:svn53533-61.fc38 fedora 44 k texlive-wasy-type1 noarch 9:svn53534-61.fc38 fedora 272 k texlive-wasysym noarch 9:svn54080-61.fc38 fedora 19 k texlive-xcolor noarch 9:svn41044-61.fc38 fedora 33 k texlive-xdvi x86_64 9:20210325-52.fc38 copr_base 355 k texlive-xetex x86_64 9:20210325-52.fc38 copr_base 1.2 M texlive-xetexconfig noarch 9:svn45845-61.fc38 fedora 12 k texlive-xifthen noarch 9:svn38929-61.fc38 fedora 17 k texlive-xkeyval noarch 9:svn57006-61.fc38 fedora 28 k texlive-xltxtra noarch 9:svn56594-61.fc38 fedora 17 k texlive-xpatch noarch 9:svn54563-61.fc38 fedora 19 k texlive-xstring noarch 9:svn49946-61.fc38 fedora 26 k texlive-xunicode noarch 9:svn30466.0.981-61.fc38 fedora 45 k texlive-zapfchan noarch 9:svn31835.0-61.fc38 fedora 110 k texlive-zapfding noarch 9:svn31835.0-61.fc38 fedora 65 k texlive-zref noarch 9:svn56611-61.fc38 fedora 672 k tokyocabinet x86_64 1.4.48-20.fc38 copr_base 506 k tzdata-java noarch 2022f-1.fc38 copr_base 149 k unixODBC x86_64 2.3.11-1.fc38 copr_base 472 k urw-base35-bookman-fonts noarch 20200910-15.fc37 fedora 848 k urw-base35-c059-fonts noarch 20200910-15.fc37 fedora 875 k urw-base35-d050000l-fonts noarch 20200910-15.fc37 fedora 76 k urw-base35-fonts noarch 20200910-15.fc37 fedora 11 k urw-base35-fonts-common noarch 20200910-15.fc37 fedora 21 k urw-base35-gothic-fonts noarch 20200910-15.fc37 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-15.fc37 fedora 796 k urw-base35-nimbus-roman-fonts noarch 20200910-15.fc37 fedora 857 k urw-base35-nimbus-sans-fonts noarch 20200910-15.fc37 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-15.fc37 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-15.fc37 fedora 42 k urw-base35-z003-fonts noarch 20200910-15.fc37 fedora 276 k vim-filesystem noarch 2:9.0.828-1.fc38 fedora 19 k vulkan-headers noarch 1.3.231.1-1.fc38 fedora 1.0 M vulkan-loader x86_64 1.3.231.1-2.fc38 fedora 145 k vulkan-loader-devel x86_64 1.3.231.1-2.fc38 fedora 9.1 k wildmagic5 x86_64 5.17-14.fc38 copr_base 1.9 M woff2 x86_64 1.0.2-15.fc37 fedora 61 k xapian-core-libs x86_64 1.4.20-1.fc38 copr_base 744 k xcb-util x86_64 0.4.0-20.fc38 copr_base 19 k xcb-util-image x86_64 0.4.0-20.fc38 copr_base 19 k xcb-util-keysyms x86_64 0.4.0-18.fc38 copr_base 14 k xcb-util-renderutil x86_64 0.3.9-21.fc38 copr_base 17 k xcb-util-wm x86_64 0.4.1-23.fc38 copr_base 31 k xerces-c x86_64 3.2.3-7.fc38 copr_base 959 k xkbcomp x86_64 1.4.5-4.fc38 copr_base 100 k xkeyboard-config noarch 2.36-2.fc37 fedora 957 k xml-common noarch 0.6.3-59.fc38 copr_base 31 k xorg-x11-fonts-ISO8859-1-100dpi noarch 7.5-34.fc38 copr_base 1.0 M xorg-x11-proto-devel noarch 2022.2-2.fc38 fedora 299 k xorg-x11-server-common x86_64 1.20.14-9.fc38 fedora 34 k xorg-x11-xauth x86_64 1:1.1.2-2.fc38 copr_base 36 k zziplib x86_64 0.13.72-2.fc38 copr_base 87 k Transaction Summary ================================================================================================= Install 890 Packages Total size: 686 M Total download size: 339 M Installed size: 2.2 G Downloading Packages: [SKIPPED] adobe-mappings-cmap-20190730-4.fc38.noarch.rpm: Already downloaded [SKIPPED] adobe-mappings-cmap-deprecated-20190730-4.fc38.noarch.rpm: Already downloaded [SKIPPED] adobe-mappings-pdf-20190401-2.fc38.noarch.rpm: Already downloaded [SKIPPED] automake-1.16.5-9.fc38.noarch.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-17.fc38.x86_64.rpm: Already downloaded [SKIPPED] bzip2-devel-1.0.8-12.fc38.x86_64.rpm: Already downloaded [SKIPPED] cups-libs-2.4.2-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] dbus-libs-1.14.4-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] expat-2.4.8-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] fontconfig-2.14.1-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] freetype-2.12.1-3.fc38.x86_64.rpm: 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gnuplot-common-5.4.5-1.fc38.x86_64 43/890 Verifying : graphviz-7.0.0-2.fc38.x86_64 44/890 Verifying : groff-base-1.22.4-10.fc38.x86_64 45/890 Verifying : gsl-2.7.1-2.fc38.x86_64 46/890 Verifying : gsl-devel-2.7.1-2.fc38.x86_64 47/890 Verifying : gts-0.7.6-42.20121130.fc38.x86_64 48/890 Verifying : guile22-2.2.7-6.fc38.x86_64 49/890 Verifying : harfbuzz-5.3.1-1.fc38.x86_64 50/890 Verifying : hdf5-1.12.1-10.fc38.x86_64 51/890 Verifying : hdf5-devel-1.12.1-10.fc38.x86_64 52/890 Verifying : hwdata-0.364-1.fc38.noarch 53/890 Verifying : hyphen-2.8.8-18.fc38.x86_64 54/890 Verifying : javapackages-filesystem-6.1.0-5.fc38.noarch 55/890 Verifying : javapackages-tools-6.1.0-5.fc38.noarch 56/890 Verifying : jbig2dec-libs-0.19-7.fc38.x86_64 57/890 Verifying : jna-5.12.1-2.fc38.x86_64 58/890 Verifying : libICE-1.0.10-9.fc38.x86_64 59/890 Verifying : libSM-1.2.3-11.fc38.x86_64 60/890 Verifying : libX11-1.8.1-2.fc38.x86_64 61/890 Verifying : libX11-common-1.8.1-2.fc38.noarch 62/890 Verifying : libX11-devel-1.8.1-2.fc38.x86_64 63/890 Verifying : libX11-xcb-1.8.1-2.fc38.x86_64 64/890 Verifying : libXau-1.0.10-1.fc38.x86_64 65/890 Verifying : libXau-devel-1.0.10-1.fc38.x86_64 66/890 Verifying : libXaw-1.0.14-3.fc38.x86_64 67/890 Verifying : libXcomposite-0.4.5-8.fc38.x86_64 68/890 Verifying : libXdamage-1.1.5-8.fc38.x86_64 69/890 Verifying : libXdmcp-1.1.3-9.fc38.x86_64 70/890 Verifying : libXfixes-6.0.0-4.fc38.x86_64 71/890 Verifying : libXfont2-2.0.3-13.fc38.x86_64 72/890 Verifying : libXi-1.8-3.fc38.x86_64 73/890 Verifying : libXpm-3.5.13-8.fc38.x86_64 74/890 Verifying : libXrandr-1.5.2-9.fc38.x86_64 75/890 Verifying : libXt-1.2.1-3.fc38.x86_64 76/890 Verifying : libXv-1.0.11-17.fc38.x86_64 77/890 Verifying : libb2-0.98.1-7.fc38.x86_64 78/890 Verifying : libdatrie-0.2.13-4.fc38.x86_64 79/890 Verifying : libedit-3.1-43.20221009cvs.fc38.x86_64 80/890 Verifying : libglvnd-1:1.5.0-1.fc38.x86_64 81/890 Verifying : libglvnd-core-devel-1:1.5.0-1.fc38.x86_64 82/890 Verifying : libglvnd-devel-1:1.5.0-1.fc38.x86_64 83/890 Verifying : libglvnd-egl-1:1.5.0-1.fc38.x86_64 84/890 Verifying : libglvnd-gles-1:1.5.0-1.fc38.x86_64 85/890 Verifying : libglvnd-glx-1:1.5.0-1.fc38.x86_64 86/890 Verifying : libglvnd-opengl-1:1.5.0-1.fc38.x86_64 87/890 Verifying : libgs-9.56.1-5.fc38.x86_64 88/890 Verifying : libicu-71.1-2.fc38.x86_64 89/890 Verifying : libicu-devel-71.1-2.fc38.x86_64 90/890 Verifying : libijs-0.35-16.fc38.x86_64 91/890 Verifying : libimagequant-2.17.0-3.fc38.x86_64 92/890 Verifying : libmpc-1.2.1-5.fc38.x86_64 93/890 Verifying : libnauty-2.7.4-2.fc38.x86_64 94/890 Verifying : libogg-2:1.3.5-4.fc38.x86_64 95/890 Verifying : libpaper-1.1.28-5.fc38.x86_64 96/890 Verifying : libpciaccess-0.16-7.fc38.x86_64 97/890 Verifying : libpng-2:1.6.37-13.fc38.x86_64 98/890 Verifying : librsvg2-2.54.5-1.fc38.x86_64 99/890 Verifying : libstemmer-2.2.0-4.fc38.x86_64 100/890 Verifying : libsvm-3.30-1.fc38.x86_64 101/890 Verifying : libsvm-devel-3.30-1.fc38.x86_64 102/890 Verifying : libthai-0.1.29-3.fc38.x86_64 103/890 Verifying : libtheora-1:1.1.1-32.fc38.x86_64 104/890 Verifying : libtiff-4.4.0-4.fc38.x86_64 105/890 Verifying : libunwind-1.6.2-5.fc38.x86_64 106/890 Verifying : libuv-1:1.44.2-2.fc38.x86_64 107/890 Verifying : libvisual-1:0.4.0-36.fc38.x86_64 108/890 Verifying : libvorbis-1:1.3.7-6.fc38.x86_64 109/890 Verifying : libvpx-1.12.0-1.fc38.x86_64 110/890 Verifying : libxcb-1.13.1-10.fc38.x86_64 111/890 Verifying : libxcb-devel-1.13.1-10.fc38.x86_64 112/890 Verifying : libxshmfence-1.3-11.fc38.x86_64 113/890 Verifying : libxslt-1.1.37-1.fc38.x86_64 114/890 Verifying : lksctp-tools-1.0.19-2.fc38.x86_64 115/890 Verifying : lua-5.4.4-6.fc38.x86_64 116/890 Verifying : lua-filesystem-1.8.0-7.fc38.x86_64 117/890 Verifying : lua-json-1.3.4-2.fc38.noarch 118/890 Verifying : lua-lpeg-1.0.2-9.fc38.x86_64 119/890 Verifying : mailcap-2.1.53-4.fc38.noarch 120/890 Verifying : make-1:4.4-1.fc38.x86_64 121/890 Verifying : mesa-libGLU-9.0.1-7.fc38.x86_64 122/890 Verifying : metis-5.1.0-33.fc38.x86_64 123/890 Verifying : mkfontscale-1.2.2-2.fc38.x86_64 124/890 Verifying : mpdecimal-2.5.1-4.fc38.x86_64 125/890 Verifying : mtdev-1.1.6-4.fc38.x86_64 126/890 Verifying : ncurses-6.3-3.20220501.fc38.x86_64 127/890 Verifying : ncurses-c++-libs-6.3-3.20220501.fc38.x86_64 128/890 Verifying : ncurses-devel-6.3-3.20220501.fc38.x86_64 129/890 Verifying : netpbm-11.00.00-1.fc38.x86_64 130/890 Verifying : nettle-3.8-2.fc38.x86_64 131/890 Verifying : nspr-4.35.0-1.fc38.x86_64 132/890 Verifying : nss-3.83.0-1.fc38.x86_64 133/890 Verifying : nss-softokn-3.83.0-1.fc38.x86_64 134/890 Verifying : nss-softokn-freebl-3.83.0-1.fc38.x86_64 135/890 Verifying : nss-sysinit-3.83.0-1.fc38.x86_64 136/890 Verifying : nss-util-3.83.0-1.fc38.x86_64 137/890 Verifying : openblas-0.3.21-3.fc38.x86_64 138/890 Verifying : openblas-openmp-0.3.21-3.fc38.x86_64 139/890 Verifying : openjpeg2-2.5.0-2.fc38.x86_64 140/890 Verifying : opus-1.3.1-11.fc38.x86_64 141/890 Verifying : patchelf-0.16.1-1.fc38.x86_64 142/890 Verifying : pciutils-libs-3.8.0-2.fc38.x86_64 143/890 Verifying : pcre2-utf16-10.40-1.fc38.1.x86_64 144/890 Verifying : percolator-3.05-10.fc38.x86_64 145/890 Verifying : percolator-data-3.05-10.fc38.noarch 146/890 Verifying : perl-Authen-SASL-2.16-28.fc38.noarch 147/890 Verifying : perl-AutoLoader-5.74-492.fc38.noarch 148/890 Verifying : perl-B-1.83-492.fc38.x86_64 149/890 Verifying : perl-B-Hooks-EndOfScope-0.26-4.fc38.noarch 150/890 Verifying : perl-Business-ISBN-3.007-4.fc38.noarch 151/890 Verifying : perl-Business-ISBN-Data-20210112.006-6.fc38.noar 152/890 Verifying : perl-Business-ISMN-1.202-6.fc38.noarch 153/890 Verifying : perl-Business-ISSN-1.005-3.fc38.noarch 154/890 Verifying : perl-Carp-1.52-489.fc38.noarch 155/890 Verifying : perl-Class-Accessor-0.51-16.fc38.noarch 156/890 Verifying : perl-Class-Data-Inheritable-0.09-4.fc38.noarch 157/890 Verifying : perl-Class-Inspector-1.36-11.fc38.noarch 158/890 Verifying : perl-Class-Method-Modifiers-2.13-13.fc38.noarch 159/890 Verifying : perl-Class-Singleton-1.6-7.fc38.noarch 160/890 Verifying : perl-Class-Struct-0.66-492.fc38.noarch 161/890 Verifying : perl-Clone-0.46-1.fc38.x86_64 162/890 Verifying : perl-Compress-Raw-Bzip2-2.201-2.fc38.x86_64 163/890 Verifying : perl-Compress-Raw-Zlib-2.202-3.fc38.x86_64 164/890 Verifying : perl-Convert-ASN1-0.33-4.fc38.noarch 165/890 Verifying : perl-Data-Compare-1.27-10.fc38.noarch 166/890 Verifying : perl-Data-Dump-1.25-5.fc38.noarch 167/890 Verifying : perl-Data-Dumper-2.184-490.fc38.x86_64 168/890 Verifying : perl-Data-OptList-0.112-5.fc38.noarch 169/890 Verifying : perl-Data-Uniqid-0.12-29.fc38.noarch 170/890 Verifying : perl-Date-Manip-6.89-1.fc38.noarch 171/890 Verifying : perl-DateTime-2:1.59-1.fc38.x86_64 172/890 Verifying : perl-DateTime-Calendar-Julian-0.107-3.fc38.noarc 173/890 Verifying : perl-DateTime-Format-Builder-0.8300-8.fc38.noarc 174/890 Verifying : perl-DateTime-Format-Strptime-1:1.79-6.fc38.noar 175/890 Verifying : perl-DateTime-Locale-1.37-1.fc38.noarch 176/890 Verifying : perl-DateTime-TimeZone-2.56-1.fc38.noarch 177/890 Verifying : perl-Devel-Caller-2.06-29.fc38.x86_64 178/890 Verifying : perl-Devel-GlobalDestruction-0.14-19.fc38.noarch 179/890 Verifying : perl-Devel-LexAlias-0.05-30.fc38.x86_64 180/890 Verifying : perl-Devel-StackTrace-1:2.04-13.fc38.noarch 181/890 Verifying : perl-Digest-1.20-489.fc38.noarch 182/890 Verifying : perl-Digest-HMAC-1.04-6.fc38.noarch 183/890 Verifying : perl-Digest-MD5-2.58-489.fc38.x86_64 184/890 Verifying : perl-Digest-SHA-1:6.03-1.fc38.x86_64 185/890 Verifying : perl-Dist-CheckConflicts-0.11-26.fc38.noarch 186/890 Verifying : perl-DynaLoader-1.52-492.fc38.x86_64 187/890 Verifying : perl-Email-Date-Format-1.005-23.fc38.noarch 188/890 Verifying : perl-Encode-4:3.19-492.fc38.x86_64 189/890 Verifying : perl-Encode-Locale-1.05-24.fc38.noarch 190/890 Verifying : perl-English-1.11-492.fc38.noarch 191/890 Verifying : perl-Errno-1.36-492.fc38.x86_64 192/890 Verifying : perl-Eval-Closure-0.14-19.fc38.noarch 193/890 Verifying : perl-Exception-Class-1.45-6.fc38.noarch 194/890 Verifying : perl-Exporter-5.77-489.fc38.noarch 195/890 Verifying : perl-ExtUtils-MM-Utils-2:7.64-490.fc38.noarch 196/890 Verifying : perl-Fcntl-1.15-492.fc38.x86_64 197/890 Verifying : perl-File-Basename-2.85-492.fc38.noarch 198/890 Verifying : perl-File-Compare-1.100.700-492.fc38.noarch 199/890 Verifying : perl-File-Copy-2.39-492.fc38.noarch 200/890 Verifying : perl-File-Find-1.40-492.fc38.noarch 201/890 Verifying : perl-File-Find-Rule-0.34-22.fc38.noarch 202/890 Verifying : perl-File-Listing-6.15-3.fc38.noarch 203/890 Verifying : perl-File-Path-2.18-489.fc38.noarch 204/890 Verifying : perl-File-ShareDir-1.118-7.fc38.noarch 205/890 Verifying : perl-File-Slurper-0.013-4.fc38.noarch 206/890 Verifying : perl-File-Temp-1:0.231.100-489.fc38.noarch 207/890 Verifying : perl-File-stat-1.12-492.fc38.noarch 208/890 Verifying : perl-FileHandle-2.03-492.fc38.noarch 209/890 Verifying : perl-Filter-2:1.64-1.fc38.x86_64 210/890 Verifying : perl-FindBin-1.53-492.fc38.noarch 211/890 Verifying : perl-GSSAPI-0.28-40.fc38.x86_64 212/890 Verifying : perl-Getopt-Long-1:2.52-489.fc38.noarch 213/890 Verifying : perl-Getopt-Std-1.13-492.fc38.noarch 214/890 Verifying : perl-HTML-Tagset-3.20-52.fc38.noarch 215/890 Verifying : perl-HTTP-Cookies-6.10-7.fc38.noarch 216/890 Verifying : perl-HTTP-Date-6.05-10.fc38.noarch 217/890 Verifying : perl-HTTP-Message-6.44-1.fc38.noarch 218/890 Verifying : perl-HTTP-Negotiate-6.01-33.fc38.noarch 219/890 Verifying : perl-HTTP-Tiny-0.082-1.fc38.noarch 220/890 Verifying : perl-Hash-Util-FieldHash-1.26-492.fc38.x86_64 221/890 Verifying : perl-I18N-LangTags-0.45-492.fc38.noarch 222/890 Verifying : perl-I18N-Langinfo-0.21-492.fc38.x86_64 223/890 Verifying : perl-IO-1.50-492.fc38.x86_64 224/890 Verifying : perl-IO-Compress-2.201-3.fc38.noarch 225/890 Verifying : perl-IO-HTML-1.004-9.fc38.noarch 226/890 Verifying : perl-IO-Socket-IP-0.41-490.fc38.noarch 227/890 Verifying : perl-IO-Socket-SSL-2.075-1.fc38.noarch 228/890 Verifying : perl-IO-String-1.08-46.fc38.noarch 229/890 Verifying : perl-IPC-Cmd-2:1.04-490.fc38.noarch 230/890 Verifying : perl-IPC-Open3-1.22-492.fc38.noarch 231/890 Verifying : perl-IPC-Run3-0.048-26.fc38.noarch 232/890 Verifying : perl-IPC-SysV-2.09-490.fc38.x86_64 233/890 Verifying : perl-IPC-System-Simple-1.30-9.fc38.noarch 234/890 Verifying : perl-JSON-4.10-1.fc38.noarch 235/890 Verifying : perl-LDAP-1:0.68-8.fc38.noarch 236/890 Verifying : perl-LWP-MediaTypes-6.04-12.fc38.noarch 237/890 Verifying : perl-LWP-Protocol-https-6.10-7.fc38.noarch 238/890 Verifying : perl-Lingua-Translit-0.29-2.fc38.noarch 239/890 Verifying : perl-List-AllUtils-0.19-7.fc38.noarch 240/890 Verifying : perl-List-SomeUtils-0.58-10.fc38.noarch 241/890 Verifying : perl-Locale-Maketext-1.32-1.fc38.noarch 242/890 Verifying : perl-Locale-Maketext-Simple-1:0.21-492.fc38.noar 243/890 Verifying : perl-Log-Dispatch-2.70-8.fc38.noarch 244/890 Verifying : perl-Log-Dispatch-FileRotate-1.38-5.fc38.noarch 245/890 Verifying : perl-Log-Log4perl-1.57-1.fc38.noarch 246/890 Verifying : perl-MIME-Base64-3.16-489.fc38.x86_64 247/890 Verifying : perl-MIME-Charset-1.013.1-1.fc38.noarch 248/890 Verifying : perl-MIME-Lite-3.033-5.fc38.noarch 249/890 Verifying : perl-MIME-Types-2.22-4.fc38.noarch 250/890 Verifying : perl-MRO-Compat-0.15-4.fc38.noarch 251/890 Verifying : perl-Mail-Sender-1:0.903-19.fc38.noarch 252/890 Verifying : perl-Mail-Sendmail-0.80-16.fc38.noarch 253/890 Verifying : perl-MailTools-2.21-12.fc38.noarch 254/890 Verifying : perl-Math-BigInt-1:1.9998.37-2.fc38.noarch 255/890 Verifying : perl-Math-BigRat-0.2624-2.fc38.noarch 256/890 Verifying : perl-Math-Complex-1.59-492.fc38.noarch 257/890 Verifying : perl-Module-CoreList-1:5.20221020-1.fc38.noarch 258/890 Verifying : perl-Module-Implementation-0.09-35.fc38.noarch 259/890 Verifying : perl-Module-Load-1:0.36-489.fc38.noarch 260/890 Verifying : perl-Module-Load-Conditional-0.74-489.fc38.noarc 261/890 Verifying : perl-Module-Metadata-1.000037-489.fc38.noarch 262/890 Verifying : perl-Module-Runtime-0.016-16.fc38.noarch 263/890 Verifying : perl-NTLM-1.09-33.fc38.noarch 264/890 Verifying : perl-Net-HTTP-6.22-3.fc38.noarch 265/890 Verifying : perl-Net-SMTP-SSL-1.04-19.fc38.noarch 266/890 Verifying : perl-Net-SSLeay-1.92-4.fc38.x86_64 267/890 Verifying : perl-Number-Compare-0.03-33.fc38.noarch 268/890 Verifying : perl-Opcode-1.57-492.fc38.x86_64 269/890 Verifying : perl-POSIX-2.03-492.fc38.x86_64 270/890 Verifying : perl-Package-Generator-1.106-26.fc38.noarch 271/890 Verifying : perl-Package-Stash-0.40-3.fc38.noarch 272/890 Verifying : perl-Package-Stash-XS-0.30-2.fc38.x86_64 273/890 Verifying : perl-PadWalker-2.5-7.fc38.x86_64 274/890 Verifying : perl-Params-Check-1:0.38-489.fc38.noarch 275/890 Verifying : perl-Params-Util-1.102-8.fc38.x86_64 276/890 Verifying : perl-Params-ValidationCompiler-0.30-17.fc38.noar 277/890 Verifying : perl-Parse-RecDescent-1.967015-18.fc38.noarch 278/890 Verifying : perl-PathTools-3.84-489.fc38.x86_64 279/890 Verifying : perl-Pod-Escapes-1:1.07-489.fc38.noarch 280/890 Verifying : perl-Pod-Html-1.33-492.fc38.noarch 281/890 Verifying : perl-Pod-Perldoc-3.28.01-490.fc38.noarch 282/890 Verifying : perl-Pod-Simple-1:3.43-490.fc38.noarch 283/890 Verifying : perl-Pod-Usage-4:2.03-3.fc38.noarch 284/890 Verifying : perl-Ref-Util-0.204-15.fc38.noarch 285/890 Verifying : perl-Ref-Util-XS-0.117-16.fc38.x86_64 286/890 Verifying : perl-Regexp-Common-2017060201-19.fc38.noarch 287/890 Verifying : perl-Role-Tiny-2.002004-7.fc38.noarch 288/890 Verifying : perl-Safe-2.43-492.fc38.noarch 289/890 Verifying : perl-Scalar-List-Utils-5:1.63-489.fc38.x86_64 290/890 Verifying : perl-SelectSaver-1.02-492.fc38.noarch 291/890 Verifying : perl-Socket-4:2.036-1.fc38.x86_64 292/890 Verifying : perl-Sort-Key-1.33-25.fc38.x86_64 293/890 Verifying : perl-Specio-0.48-2.fc38.noarch 294/890 Verifying : perl-Storable-1:3.26-489.fc38.x86_64 295/890 Verifying : perl-Sub-Exporter-0.988-5.fc38.noarch 296/890 Verifying : perl-Sub-Exporter-Progressive-0.001013-19.fc38.n 297/890 Verifying : perl-Sub-Identify-0.14-20.fc38.x86_64 298/890 Verifying : perl-Sub-Install-0.928-33.fc38.noarch 299/890 Verifying : perl-Symbol-1.09-492.fc38.noarch 300/890 Verifying : perl-Sys-Hostname-1.24-492.fc38.x86_64 301/890 Verifying : perl-Sys-Syslog-0.36-490.fc38.x86_64 302/890 Verifying : perl-Term-ANSIColor-5.01-490.fc38.noarch 303/890 Verifying : perl-Term-Cap-1.17-489.fc38.noarch 304/890 Verifying : perl-Text-Balanced-2.06-2.fc38.noarch 305/890 Verifying : perl-Text-CSV-2.02-1.fc38.noarch 306/890 Verifying : perl-Text-Glob-0.11-18.fc38.noarch 307/890 Verifying : perl-Text-ParseWords-3.31-489.fc38.noarch 308/890 Verifying : perl-Text-Roman-3.5-23.fc38.noarch 309/890 Verifying : perl-Text-Tabs+Wrap-2021.0814-489.fc38.noarch 310/890 Verifying : perl-Text-Unidecode-1.30-19.fc38.noarch 311/890 Verifying : perl-Thread-Queue-3.14-489.fc38.noarch 312/890 Verifying : perl-Tie-4.6-492.fc38.noarch 313/890 Verifying : perl-Tie-Cycle-1.227-4.fc38.noarch 314/890 Verifying : perl-Tie-RefHash-1.40-489.fc38.noarch 315/890 Verifying : perl-Time-HiRes-4:1.9770-489.fc38.x86_64 316/890 Verifying : perl-Time-Local-2:1.300-489.fc38.noarch 317/890 Verifying : perl-TimeDate-1:2.33-9.fc38.noarch 318/890 Verifying : perl-Try-Tiny-0.31-4.fc38.noarch 319/890 Verifying : perl-Unicode-Collate-1.31-489.fc38.x86_64 320/890 Verifying : perl-Unicode-LineBreak-2019.001-14.fc38.x86_64 321/890 Verifying : perl-Unicode-Normalize-1.31-489.fc38.x86_64 322/890 Verifying : perl-Unicode-UCD-0.78-492.fc38.noarch 323/890 Verifying : perl-Variable-Magic-0.63-1.fc38.x86_64 324/890 Verifying : perl-WWW-RobotRules-6.02-33.fc38.noarch 325/890 Verifying : perl-XML-LibXML-1:2.0208-1.fc38.x86_64 326/890 Verifying : perl-XML-LibXML-Simple-1.01-10.fc38.noarch 327/890 Verifying : perl-XML-LibXSLT-2.002.000-3.fc38.x86_64 328/890 Verifying : perl-XML-NamespaceSupport-1.12-18.fc38.noarch 329/890 Verifying : perl-XML-Parser-2.46-12.fc38.x86_64 330/890 Verifying : perl-XML-SAX-1.02-11.fc38.noarch 331/890 Verifying : perl-XML-SAX-Base-1.09-18.fc38.noarch 332/890 Verifying : perl-XML-Writer-0.900-9.fc38.noarch 333/890 Verifying : perl-XML-XPath-1.48-2.fc38.noarch 334/890 Verifying : perl-XString-0.005-7.fc38.x86_64 335/890 Verifying : perl-autodie-2.34-490.fc38.noarch 336/890 Verifying : perl-autovivification-0.18-17.fc38.x86_64 337/890 Verifying : perl-base-2.27-492.fc38.noarch 338/890 Verifying : perl-constant-1.33-490.fc38.noarch 339/890 Verifying : perl-deprecate-0.04-492.fc38.noarch 340/890 Verifying : perl-encoding-4:3.00-492.fc38.x86_64 341/890 Verifying : perl-if-0.61.000-492.fc38.noarch 342/890 Verifying : perl-interpreter-4:5.36.0-492.fc38.x86_64 343/890 Verifying : perl-lib-0.65-492.fc38.x86_64 344/890 Verifying : perl-libnet-3.14-490.fc38.noarch 345/890 Verifying : perl-libs-4:5.36.0-492.fc38.x86_64 346/890 Verifying : perl-libwww-perl-6.67-3.fc38.noarch 347/890 Verifying : perl-locale-1.10-492.fc38.noarch 348/890 Verifying : perl-meta-notation-5.36.0-492.fc38.noarch 349/890 Verifying : perl-mro-1.26-492.fc38.x86_64 350/890 Verifying : perl-namespace-autoclean-0.29-13.fc38.noarch 351/890 Verifying : perl-namespace-clean-0.27-21.fc38.noarch 352/890 Verifying : perl-open-1.13-492.fc38.noarch 353/890 Verifying : perl-overload-1.35-492.fc38.noarch 354/890 Verifying : perl-overloading-0.02-492.fc38.noarch 355/890 Verifying : perl-parent-1:0.238-489.fc38.noarch 356/890 Verifying : perl-podlators-1:4.14-489.fc38.noarch 357/890 Verifying : perl-sigtrap-1.10-492.fc38.noarch 358/890 Verifying : perl-subs-1.04-492.fc38.noarch 359/890 Verifying : perl-threads-1:2.27-489.fc38.x86_64 360/890 Verifying : perl-threads-shared-1.64-489.fc38.x86_64 361/890 Verifying : perl-vars-1.05-492.fc38.noarch 362/890 Verifying : perl-version-8:0.99.29-490.fc38.x86_64 363/890 Verifying : poppler-22.08.0-3.fc38.x86_64 364/890 Verifying : poppler-data-0.4.11-3.fc38.noarch 365/890 Verifying : poppler-glib-22.08.0-3.fc38.x86_64 366/890 Verifying : procps-ng-3.3.17-8.fc38.x86_64 367/890 Verifying : python3-3.11.0-1.fc38.x86_64 368/890 Verifying : python3-libs-3.11.0-1.fc38.x86_64 369/890 Verifying : qt5-qtbase-5.15.7-1.fc38.x86_64 370/890 Verifying : qt5-qtbase-common-5.15.7-1.fc38.noarch 371/890 Verifying : qt5-qtbase-devel-5.15.7-1.fc38.x86_64 372/890 Verifying : qt5-qtbase-gui-5.15.7-1.fc38.x86_64 373/890 Verifying : qt5-qtdeclarative-5.15.7-1.fc38.x86_64 374/890 Verifying : qt5-qtdeclarative-devel-5.15.7-1.fc38.x86_64 375/890 Verifying : qt5-qtlocation-5.15.7-1.fc38.x86_64 376/890 Verifying : qt5-qtlocation-devel-5.15.7-1.fc38.x86_64 377/890 Verifying : qt5-qtsensors-5.15.7-1.fc38.x86_64 378/890 Verifying : qt5-qtsvg-5.15.7-1.fc38.x86_64 379/890 Verifying : qt5-qtsvg-devel-5.15.7-1.fc38.x86_64 380/890 Verifying : qt5-qttools-common-5.15.7-1.fc38.noarch 381/890 Verifying : qt5-qttools-libs-designer-5.15.7-1.fc38.x86_64 382/890 Verifying : qt5-qtwebchannel-5.15.7-1.fc38.x86_64 383/890 Verifying : qt5-qtwebchannel-devel-5.15.7-1.fc38.x86_64 384/890 Verifying : qt5-qtwebengine-5.15.10-3.fc38.x86_64 385/890 Verifying : qt5-qtwebengine-devel-5.15.10-3.fc38.x86_64 386/890 Verifying : qt5-qtwebengine-devtools-5.15.10-3.fc38.x86_64 387/890 Verifying : qt5-qtwebkit-5.212.0-0.70alpha4.fc38.x86_64 388/890 Verifying : qt5-qtwebkit-devel-5.212.0-0.70alpha4.fc38.x86_6 389/890 Verifying : qt5-qtx11extras-5.15.7-1.fc38.x86_64 390/890 Verifying : qt5-qtx11extras-devel-5.15.7-1.fc38.x86_64 391/890 Verifying : readline-devel-8.2-2.fc38.x86_64 392/890 Verifying : rhash-1.4.3-1.fc38.x86_64 393/890 Verifying : scotch-6.1.2-3.fc38.x86_64 394/890 Verifying : shared-mime-info-2.2-2.fc38.x86_64 395/890 Verifying : snappy-1.1.9-5.fc38.x86_64 396/890 Verifying : sombok-2.4.0-17.fc38.x86_64 397/890 Verifying : sqlite-3.39.4-1.fc38.x86_64 398/890 Verifying : sqlite-devel-3.39.4-1.fc38.x86_64 399/890 Verifying : suitesparse-5.13.0-1.fc38.x86_64 400/890 Verifying : tbb-2020.3-12.fc38.x86_64 401/890 Verifying : tbb-devel-2020.3-12.fc38.x86_64 402/890 Verifying : tcl-1:8.6.12-3.fc38.x86_64 403/890 Verifying : teckit-2.5.9-9.fc38.x86_64 404/890 Verifying : texlive-attachfile2-9:20210325-52.fc38.noarch 405/890 Verifying : texlive-base-9:20210325-52.fc38.x86_64 406/890 Verifying : texlive-bibtex-9:20210325-52.fc38.x86_64 407/890 Verifying : texlive-dvipdfmx-9:20210325-52.fc38.x86_64 408/890 Verifying : texlive-dvips-9:20210325-52.fc38.x86_64 409/890 Verifying : texlive-epstopdf-9:20210325-52.fc38.noarch 410/890 Verifying : texlive-glyphlist-9:20210325-52.fc38.noarch 411/890 Verifying : texlive-gsftopk-9:20210325-52.fc38.x86_64 412/890 Verifying : texlive-kpathsea-9:20210325-52.fc38.x86_64 413/890 Verifying : texlive-latex-9:20210325-52.fc38.noarch 414/890 Verifying : texlive-lib-9:20210325-52.fc38.x86_64 415/890 Verifying : texlive-luahbtex-9:20210325-52.fc38.x86_64 416/890 Verifying : texlive-luaotfload-9:20210325-52.fc38.noarch 417/890 Verifying : texlive-luatex-9:20210325-52.fc38.x86_64 418/890 Verifying : texlive-lwarp-9:20210325-52.fc38.noarch 419/890 Verifying : texlive-makeindex-9:20210325-52.fc38.x86_64 420/890 Verifying : texlive-metafont-9:20210325-52.fc38.x86_64 421/890 Verifying : texlive-mfware-9:20210325-52.fc38.x86_64 422/890 Verifying : texlive-mptopdf-9:20210325-52.fc38.noarch 423/890 Verifying : texlive-oberdiek-9:20210325-52.fc38.noarch 424/890 Verifying : texlive-pdftex-9:20210325-52.fc38.x86_64 425/890 Verifying : texlive-tex-9:20210325-52.fc38.x86_64 426/890 Verifying : texlive-texlive-en-9:20210325-52.fc38.noarch 427/890 Verifying : texlive-texlive-scripts-9:20210325-52.fc38.noarc 428/890 Verifying : texlive-texlive.infra-9:20210325-52.fc38.noarch 429/890 Verifying : texlive-thumbpdf-9:20210325-52.fc38.noarch 430/890 Verifying : texlive-xdvi-9:20210325-52.fc38.x86_64 431/890 Verifying : texlive-xetex-9:20210325-52.fc38.x86_64 432/890 Verifying : tokyocabinet-1.4.48-20.fc38.x86_64 433/890 Verifying : tzdata-java-2022f-1.fc38.noarch 434/890 Verifying : unixODBC-2.3.11-1.fc38.x86_64 435/890 Verifying : wildmagic5-5.17-14.fc38.x86_64 436/890 Verifying : wildmagic5-devel-5.17-14.fc38.x86_64 437/890 Verifying : xapian-core-libs-1.4.20-1.fc38.x86_64 438/890 Verifying : xcb-util-0.4.0-20.fc38.x86_64 439/890 Verifying : xcb-util-image-0.4.0-20.fc38.x86_64 440/890 Verifying : xcb-util-keysyms-0.4.0-18.fc38.x86_64 441/890 Verifying : xcb-util-renderutil-0.3.9-21.fc38.x86_64 442/890 Verifying : xcb-util-wm-0.4.1-23.fc38.x86_64 443/890 Verifying : xerces-c-3.2.3-7.fc38.x86_64 444/890 Verifying : xerces-c-devel-3.2.3-7.fc38.x86_64 445/890 Verifying : xkbcomp-1.4.5-4.fc38.x86_64 446/890 Verifying : xml-common-0.6.3-59.fc38.noarch 447/890 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-34.fc38.noar 448/890 Verifying : xorg-x11-xauth-1:1.1.2-2.fc38.x86_64 449/890 Verifying : zlib-devel-1.2.12-5.fc38.x86_64 450/890 Verifying : zziplib-0.13.72-2.fc38.x86_64 451/890 Verifying : Lmod-8.7.14-1.fc38.x86_64 452/890 Verifying : MUMPS-5.5.1-1.fc38.x86_64 453/890 Verifying : MUMPS-common-5.5.1-1.fc38.noarch 454/890 Verifying : annobin-docs-10.92-1.fc38.noarch 455/890 Verifying : annobin-plugin-gcc-10.92-1.fc38.x86_64 456/890 Verifying : autoconf-2.71-4.fc38.noarch 457/890 Verifying : biber-2.18-1.fc38.noarch 458/890 Verifying : boost-1.78.0-9.fc37.x86_64 459/890 Verifying : boost-atomic-1.78.0-9.fc37.x86_64 460/890 Verifying : boost-chrono-1.78.0-9.fc37.x86_64 461/890 Verifying : boost-container-1.78.0-9.fc37.x86_64 462/890 Verifying : boost-context-1.78.0-9.fc37.x86_64 463/890 Verifying : boost-contract-1.78.0-9.fc37.x86_64 464/890 Verifying : boost-coroutine-1.78.0-9.fc37.x86_64 465/890 Verifying : boost-date-time-1.78.0-9.fc37.x86_64 466/890 Verifying : boost-devel-1.78.0-9.fc37.x86_64 467/890 Verifying : boost-fiber-1.78.0-9.fc37.x86_64 468/890 Verifying : boost-filesystem-1.78.0-9.fc37.x86_64 469/890 Verifying : boost-graph-1.78.0-9.fc37.x86_64 470/890 Verifying : boost-iostreams-1.78.0-9.fc37.x86_64 471/890 Verifying : boost-json-1.78.0-9.fc37.x86_64 472/890 Verifying : boost-locale-1.78.0-9.fc37.x86_64 473/890 Verifying : boost-log-1.78.0-9.fc37.x86_64 474/890 Verifying : boost-math-1.78.0-9.fc37.x86_64 475/890 Verifying : boost-nowide-1.78.0-9.fc37.x86_64 476/890 Verifying : boost-numpy3-1.78.0-9.fc37.x86_64 477/890 Verifying : boost-program-options-1.78.0-9.fc37.x86_64 478/890 Verifying : boost-python3-1.78.0-9.fc37.x86_64 479/890 Verifying : boost-random-1.78.0-9.fc37.x86_64 480/890 Verifying : boost-regex-1.78.0-9.fc37.x86_64 481/890 Verifying : boost-serialization-1.78.0-9.fc37.x86_64 482/890 Verifying : boost-stacktrace-1.78.0-9.fc37.x86_64 483/890 Verifying : boost-system-1.78.0-9.fc37.x86_64 484/890 Verifying : boost-test-1.78.0-9.fc37.x86_64 485/890 Verifying : boost-thread-1.78.0-9.fc37.x86_64 486/890 Verifying : boost-timer-1.78.0-9.fc37.x86_64 487/890 Verifying : boost-type_erasure-1.78.0-9.fc37.x86_64 488/890 Verifying : boost-wave-1.78.0-9.fc37.x86_64 489/890 Verifying : byte-buddy-1.12.10-2.fc38.noarch 490/890 Verifying : byte-buddy-agent-1.12.10-2.fc38.noarch 491/890 Verifying : cairo-1.17.6-2.fc37.x86_64 492/890 Verifying : cairo-gobject-1.17.6-2.fc37.x86_64 493/890 Verifying : clang-libs-15.0.4-1.fc38.x86_64 494/890 Verifying : clang-resource-filesystem-15.0.4-1.fc38.x86_64 495/890 Verifying : cmake-3.25.0-0.6.rc4.fc38.x86_64 496/890 Verifying : cmake-data-3.25.0-0.6.rc4.fc38.noarch 497/890 Verifying : cmake-filesystem-3.25.0-0.6.rc4.fc38.x86_64 498/890 Verifying : cmake-rpm-macros-3.25.0-0.6.rc4.fc38.noarch 499/890 Verifying : copy-jdk-configs-4.1-1.fc38.noarch 500/890 Verifying : cpp-12.2.1-3.fc38.x86_64 501/890 Verifying : crypto-policies-scripts-20221110-1.git87a75f4.fc 502/890 Verifying : desktop-file-utils-0.26-7.fc37.x86_64 503/890 Verifying : doxygen-2:1.9.5-2.fc38.x86_64 504/890 Verifying : emacs-filesystem-1:28.1-3.fc37.noarch 505/890 Verifying : fonts-filesystem-1:2.0.5-9.fc38.noarch 506/890 Verifying : gcc-12.2.1-3.fc38.x86_64 507/890 Verifying : gcc-c++-12.2.1-3.fc38.x86_64 508/890 Verifying : gcc-gfortran-12.2.1-3.fc38.x86_64 509/890 Verifying : gcc-plugin-annobin-12.2.1-3.fc38.x86_64 510/890 Verifying : gdk-pixbuf2-2.42.10-1.fc38.x86_64 511/890 Verifying : glib2-2.74.1-2.fc38.x86_64 512/890 Verifying : glibc-devel-2.36.9000-13.fc38.x86_64 513/890 Verifying : glibc-headers-x86-2.36.9000-13.fc38.noarch 514/890 Verifying : gnutls-3.7.8-9.fc38.x86_64 515/890 Verifying : google-droid-sans-fonts-20200215-13.fc37.noarch 516/890 Verifying : google-noto-fonts-common-20201206^1.git0c78c8329 517/890 Verifying : google-noto-sans-vf-fonts-20201206^1.git0c78c832 518/890 Verifying : graphene-1.10.6-4.fc37.x86_64 519/890 Verifying : graphite2-1.3.14-10.fc37.x86_64 520/890 Verifying : gstreamer1-1.20.4-1.fc38.x86_64 521/890 Verifying : gstreamer1-plugins-base-1.20.4-1.fc38.x86_64 522/890 Verifying : iso-codes-4.12.0-1.fc38.noarch 523/890 Verifying : jacop-4.8-9.fc37.noarch 524/890 Verifying : java-17-openjdk-headless-1:17.0.6.0.1-0.1.ea.fc3 525/890 Verifying : java-diff-utils-4.12-1.fc37.noarch 526/890 Verifying : jbigkit-libs-2.1-24.fc37.x86_64 527/890 Verifying : jline-builtins-3.21.0-6.fc37.noarch 528/890 Verifying : jline-reader-3.21.0-6.fc37.noarch 529/890 Verifying : jline-style-3.21.0-6.fc37.noarch 530/890 Verifying : jline-terminal-3.21.0-6.fc37.noarch 531/890 Verifying : jline-terminal-jna-3.21.0-6.fc37.noarch 532/890 Verifying : json-glib-1.6.6-3.fc37.x86_64 533/890 Verifying : jsoncpp-1.9.5-3.fc37.x86_64 534/890 Verifying : kernel-headers-6.1.0-0.rc4.git0.1.fc38.x86_64 535/890 Verifying : langpacks-core-font-en-3.0-26.fc37.noarch 536/890 Verifying : 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libinput-1.21.0-3.fc38.x86_64 557/890 Verifying : libjpeg-turbo-2.1.4-1.fc38.x86_64 558/890 Verifying : libquadmath-12.2.1-3.fc38.x86_64 559/890 Verifying : libquadmath-devel-12.2.1-3.fc38.x86_64 560/890 Verifying : libstdc++-devel-12.2.1-3.fc38.x86_64 561/890 Verifying : libtool-ltdl-2.4.7-2.fc37.x86_64 562/890 Verifying : libvmaf-2.3.0-4.fc37.x86_64 563/890 Verifying : libwacom-2.4.0-1.fc37.x86_64 564/890 Verifying : libwacom-data-2.4.0-1.fc37.noarch 565/890 Verifying : libwayland-client-1.21.0-1.fc37.x86_64 566/890 Verifying : libwayland-cursor-1.21.0-1.fc37.x86_64 567/890 Verifying : libwayland-egl-1.21.0-1.fc37.x86_64 568/890 Verifying : libwayland-server-1.21.0-1.fc37.x86_64 569/890 Verifying : libwebp-1.2.4-2.fc38.x86_64 570/890 Verifying : libxcrypt-devel-4.4.30-3.fc38.x86_64 571/890 Verifying : libxkbcommon-1.4.1-2.fc37.x86_64 572/890 Verifying : libxkbcommon-x11-1.4.1-2.fc37.x86_64 573/890 Verifying : libxkbfile-1.1.1-1.fc38.x86_64 574/890 Verifying : llvm-libs-15.0.4-1.fc38.x86_64 575/890 Verifying : lua-posix-35.1-4.fc37.x86_64 576/890 Verifying : lua-term-0.07-16.fc37.x86_64 577/890 Verifying : m4-1.4.19-4.fc37.x86_64 578/890 Verifying : mesa-libEGL-22.3.0~rc2-2.fc38.x86_64 579/890 Verifying : mesa-libEGL-devel-22.3.0~rc2-2.fc38.x86_64 580/890 Verifying : mesa-libGL-22.3.0~rc2-2.fc38.x86_64 581/890 Verifying : mesa-libgbm-22.3.0~rc2-2.fc38.x86_64 582/890 Verifying : mesa-libglapi-22.3.0~rc2-2.fc38.x86_64 583/890 Verifying : mockito-3.12.4-5.fc38.noarch 584/890 Verifying : mp-3.1.0-40.20200303git7fd4828.fc38.x86_64 585/890 Verifying : objectweb-asm-9.3-4.fc38.noarch 586/890 Verifying : objenesis-3.3-1.fc38.noarch 587/890 Verifying : opentest4j-1.2.0-11.fc38.noarch 588/890 Verifying : orc-0.4.33-1.fc38.x86_64 589/890 Verifying : pango-1.50.11-1.fc38.x86_64 590/890 Verifying : perl-Date-ISO8601-0.005-16.fc37.noarch 591/890 Verifying : perl-DateTime-TimeZone-SystemV-0.010-17.fc37.noa 592/890 Verifying : perl-DateTime-TimeZone-Tzfile-0.011-17.fc37.noar 593/890 Verifying : perl-Devel-CallChecker-0.008-17.fc37.x86_64 594/890 Verifying : perl-DynaLoader-Functions-0.003-16.fc37.noarch 595/890 Verifying : perl-HTML-Parser-3.80-1.fc38.x86_64 596/890 Verifying : perl-List-UtilsBy-0.12-3.fc37.noarch 597/890 Verifying : perl-Mozilla-CA-20211001-5.fc38.noarch 598/890 Verifying : perl-Params-Classify-0.015-17.fc37.x86_64 599/890 Verifying : perl-Params-Validate-1.31-1.fc38.x86_64 600/890 Verifying : perl-Text-BibTeX-0.88-12.fc37.x86_64 601/890 Verifying : perl-Text-Soundex-3.05-24.fc38.x86_64 602/890 Verifying : perl-URI-5.17-1.fc38.noarch 603/890 Verifying : perltidy-20221112-1.fc38.noarch 604/890 Verifying : pixman-0.40.0-6.fc37.x86_64 605/890 Verifying : python-pip-wheel-22.2.2-2.fc38.noarch 606/890 Verifying : python-setuptools-wheel-65.5.1-1.fc38.noarch 607/890 Verifying : python3-numpy-1:1.23.4-1.fc38.x86_64 608/890 Verifying : qt-settings-37.0-1.fc38.noarch 609/890 Verifying : qt5-rpm-macros-5.15.7-1.fc38.noarch 610/890 Verifying : re2-1:20211101-3.fc36.x86_64 611/890 Verifying : scala-2.13.10-1.fc38.noarch 612/890 Verifying : scala-library-2.13.10-1.fc38.noarch 613/890 Verifying : scala-reflect-2.13.10-1.fc38.noarch 614/890 Verifying : svt-av1-libs-1.3.0-1.fc38.x86_64 615/890 Verifying : texlive-9:2021-61.fc38.noarch 616/890 Verifying : texlive-a4wide-9:svn20943.0-61.fc38.noarch 617/890 Verifying : texlive-ae-9:svn15878.1.4-61.fc38.noarch 618/890 Verifying : texlive-algorithms-9:svn42428-61.fc38.noarch 619/890 Verifying : texlive-alphalph-9:svn53087-61.fc38.noarch 620/890 Verifying : texlive-amscls-9:svn55378-61.fc38.noarch 621/890 Verifying : texlive-amsfonts-9:svn29208.3.04-61.fc38.noarch 622/890 Verifying : texlive-amsmath-9:svn56514-61.fc38.noarch 623/890 Verifying : texlive-anysize-9:svn15878.0-61.fc38.noarch 624/890 Verifying : texlive-atbegshi-9:svn53051-61.fc38.noarch 625/890 Verifying : texlive-attachfile-9:svn42099-61.fc38.noarch 626/890 Verifying : texlive-atveryend-9:svn53108-61.fc38.noarch 627/890 Verifying : texlive-auto-pst-pdf-9:svn56596-61.fc38.noarch 628/890 Verifying : texlive-auxhook-9:svn53173-61.fc38.noarch 629/890 Verifying : texlive-avantgar-9:svn31835.0-61.fc38.noarch 630/890 Verifying : texlive-babel-english-9:svn44495-61.fc38.noarch 631/890 Verifying : texlive-babel-9:svn58999-61.fc38.noarch 632/890 Verifying : texlive-babelbib-9:svn57349-61.fc38.noarch 633/890 Verifying : texlive-beamer-9:svn58537-61.fc38.noarch 634/890 Verifying : texlive-bera-9:svn20031.0-61.fc38.noarch 635/890 Verifying : texlive-beton-9:svn15878.0-61.fc38.noarch 636/890 Verifying : texlive-biblatex-9:svn63878-61.fc38.noarch 637/890 Verifying : texlive-bidi-9:svn55193-61.fc38.noarch 638/890 Verifying : texlive-bigintcalc-9:svn53172-61.fc38.noarch 639/890 Verifying : texlive-bitset-9:svn53837-61.fc38.noarch 640/890 Verifying : texlive-bookman-9:svn31835.0-61.fc38.noarch 641/890 Verifying : texlive-bookmark-9:svn56885-61.fc38.noarch 642/890 Verifying : texlive-booktabs-9:svn53402-61.fc38.noarch 643/890 Verifying : texlive-breakurl-9:svn29901.1.40-61.fc38.noarch 644/890 Verifying : texlive-breqn-9:svn56422-61.fc38.noarch 645/890 Verifying : texlive-caption-9:svn56771-61.fc38.noarch 646/890 Verifying : texlive-carlisle-9:svn56753-61.fc38.noarch 647/890 Verifying : texlive-catchfile-9:svn53084-61.fc38.noarch 648/890 Verifying : texlive-changepage-9:svn15878.1.0c-61.fc38.noarc 649/890 Verifying : texlive-charter-9:svn15878.0-61.fc38.noarch 650/890 Verifying : texlive-cite-9:svn36428.5.5-61.fc38.noarch 651/890 Verifying : texlive-cm-super-9:svn15878.0-61.fc38.noarch 652/890 Verifying : texlive-cm-9:svn57963-61.fc38.noarch 653/890 Verifying : texlive-cmap-9:svn57640-61.fc38.noarch 654/890 Verifying : texlive-cmextra-9:svn57866-61.fc38.noarch 655/890 Verifying : texlive-collection-basic-9:svn59159-61.fc38.noar 656/890 Verifying : texlive-collection-fontsrecommended-9:svn54074-6 657/890 Verifying : texlive-collection-latex-9:svn57048-61.fc38.noar 658/890 Verifying : texlive-collection-latexrecommended-9:svn57862-6 659/890 Verifying : texlive-colorprofiles-9:svn49086-61.fc38.noarch 660/890 Verifying : texlive-colortbl-9:svn53545-61.fc38.noarch 661/890 Verifying : texlive-courier-9:svn35058.0-61.fc38.noarch 662/890 Verifying : texlive-crop-9:svn55424-61.fc38.noarch 663/890 Verifying : texlive-csquotes-9:svn57844-61.fc38.noarch 664/890 Verifying : texlive-ctable-9:svn38672-61.fc38.noarch 665/890 Verifying : texlive-ctablestack-9:svn38514-61.fc38.noarch 666/890 Verifying : texlive-currfile-9:svn56478-61.fc38.noarch 667/890 Verifying : texlive-dehyph-9:svn48599-61.fc38.noarch 668/890 Verifying : texlive-ec-9:svn25033.1.0-61.fc38.noarch 669/890 Verifying : texlive-enctex-9:svn34957.0-61.fc38.noarch 670/890 Verifying : texlive-enumitem-9:svn51423-61.fc38.noarch 671/890 Verifying : texlive-epstopdf-pkg-9:svn53546-61.fc38.noarch 672/890 Verifying : texlive-eso-pic-9:svn56658-61.fc38.noarch 673/890 Verifying : texlive-etex-pkg-9:svn41784-61.fc38.noarch 674/890 Verifying : texlive-etex-9:svn56291-61.fc38.noarch 675/890 Verifying : texlive-etexcmds-9:svn53171-61.fc38.noarch 676/890 Verifying : texlive-etoolbox-9:svn56554-61.fc38.noarch 677/890 Verifying : texlive-euenc-9:svn19795.0.1h-61.fc38.noarch 678/890 Verifying : texlive-euler-9:svn42428-61.fc38.noarch 679/890 Verifying : texlive-euro-ce-9:svn25714-61.fc38.noarch 680/890 Verifying : texlive-euro-9:svn22191.1.1-61.fc38.noarch 681/890 Verifying : texlive-eurosym-9:svn17265.1.4_subrfix-61.fc38.n 682/890 Verifying : texlive-everysel-9:svn57489-61.fc38.noarch 683/890 Verifying : texlive-everyshi-9:svn57001-61.fc38.noarch 684/890 Verifying : texlive-extsizes-9:svn17263.1.4a-61.fc38.noarch 685/890 Verifying : texlive-fancybox-9:svn18304.1.4-61.fc38.noarch 686/890 Verifying : texlive-fancyhdr-9:svn57672-61.fc38.noarch 687/890 Verifying : texlive-fancyref-9:svn15878.0.9c-61.fc38.noarch 688/890 Verifying : texlive-fancyvrb-9:svn57488-61.fc38.noarch 689/890 Verifying : texlive-filecontents-9:svn52142-61.fc38.noarch 690/890 Verifying : texlive-filehook-9:svn56479-61.fc38.noarch 691/890 Verifying : texlive-finstrut-9:svn21719.0.5-61.fc38.noarch 692/890 Verifying : texlive-firstaid-9:svn58440-61.fc38.noarch 693/890 Verifying : texlive-fix2col-9:svn38770-61.fc38.noarch 694/890 Verifying : texlive-float-9:svn15878.1.3d-61.fc38.noarch 695/890 Verifying : texlive-fontspec-9:svn56594-61.fc38.noarch 696/890 Verifying : texlive-footmisc-9:svn23330.5.5b-61.fc38.noarch 697/890 Verifying : texlive-footnotehyper-9:svn57618-61.fc38.noarch 698/890 Verifying : texlive-fp-9:svn49719-61.fc38.noarch 699/890 Verifying : texlive-fpl-9:svn54512-61.fc38.noarch 700/890 Verifying : texlive-geometry-9:svn54080-61.fc38.noarch 701/890 Verifying : texlive-gettitlestring-9:svn53170-61.fc38.noarch 702/890 Verifying : texlive-graphics-cfg-9:svn41448-61.fc38.noarch 703/890 Verifying : texlive-graphics-def-9:svn58539-61.fc38.noarch 704/890 Verifying : texlive-graphics-9:svn56514-61.fc38.noarch 705/890 Verifying : texlive-grfext-9:svn53024-61.fc38.noarch 706/890 Verifying : texlive-grffile-9:svn52756-61.fc38.noarch 707/890 Verifying : texlive-helvetic-9:svn31835.0-61.fc38.noarch 708/890 Verifying : texlive-hobsub-9:svn52810-61.fc38.noarch 709/890 Verifying : texlive-hologo-9:svn53048-61.fc38.noarch 710/890 Verifying : texlive-hopatch-9:svn56106-61.fc38.noarch 711/890 Verifying : texlive-hycolor-9:svn53584-61.fc38.noarch 712/890 Verifying : texlive-hyperref-9:svn58024-61.fc38.noarch 713/890 Verifying : texlive-hyph-utf8-9:svn58619-61.fc38.noarch 714/890 Verifying : texlive-hyphen-base-9:svn58630-61.fc38.noarch 715/890 Verifying : texlive-hyphenex-9:svn57387-61.fc38.noarch 716/890 Verifying : texlive-ifmtarg-9:svn47544-61.fc38.noarch 717/890 Verifying : texlive-ifplatform-9:svn45533-61.fc38.noarch 718/890 Verifying : texlive-iftex-9:svn56594-61.fc38.noarch 719/890 Verifying : texlive-index-9:svn24099.4.1beta-61.fc38.noarch 720/890 Verifying : texlive-infwarerr-9:svn53023-61.fc38.noarch 721/890 Verifying : texlive-intcalc-9:svn53168-61.fc38.noarch 722/890 Verifying : texlive-jknapltx-9:svn19440.0-61.fc38.noarch 723/890 Verifying : texlive-kastrup-9:svn15878.0-61.fc38.noarch 724/890 Verifying : texlive-knuth-lib-9:svn57963-61.fc38.noarch 725/890 Verifying : texlive-knuth-local-9:svn57963-61.fc38.noarch 726/890 Verifying : texlive-koma-script-9:svn58585-61.fc38.noarch 727/890 Verifying : texlive-kvdefinekeys-9:svn53193-61.fc38.noarch 728/890 Verifying : texlive-kvoptions-9:svn56609-61.fc38.noarch 729/890 Verifying : texlive-kvsetkeys-9:svn53166-61.fc38.noarch 730/890 Verifying : texlive-l3backend-9:svn59118-61.fc38.noarch 731/890 Verifying : texlive-l3experimental-9:svn57789-61.fc38.noarch 732/890 Verifying : texlive-l3kernel-9:svn59118-61.fc38.noarch 733/890 Verifying : texlive-l3packages-9:svn59118-61.fc38.noarch 734/890 Verifying : texlive-latex-fonts-9:svn28888.0-61.fc38.noarch 735/890 Verifying : texlive-latexbug-9:svn58151-61.fc38.noarch 736/890 Verifying : texlive-latexconfig-9:svn53525-61.fc38.noarch 737/890 Verifying : texlive-letltxmacro-9:svn53022-61.fc38.noarch 738/890 Verifying : texlive-lineno-9:svn57866-61.fc38.noarch 739/890 Verifying : texlive-listings-9:svn55265-61.fc38.noarch 740/890 Verifying : texlive-lm-math-9:svn36915.1.959-61.fc38.noarch 741/890 Verifying : texlive-lm-9:svn58637-61.fc38.noarch 742/890 Verifying : texlive-logreq-9:svn53003-61.fc38.noarch 743/890 Verifying : texlive-ltabptch-9:svn17533.1.74d-61.fc38.noarch 744/890 Verifying : texlive-ltxcmds-9:svn56421-61.fc38.noarch 745/890 Verifying : texlive-ltxmisc-9:svn21927.0-61.fc38.noarch 746/890 Verifying : texlive-lua-alt-getopt-9:svn56414-61.fc38.noarch 747/890 Verifying : texlive-luabidi-9:svn54512-61.fc38.noarch 748/890 Verifying : texlive-lualatex-math-9:svn56541-61.fc38.noarch 749/890 Verifying : texlive-lualibs-9:svn57277-61.fc38.noarch 750/890 Verifying : texlive-luatexbase-9:svn52663-61.fc38.noarch 751/890 Verifying : texlive-makecmds-9:svn15878.0-61.fc38.noarch 752/890 Verifying : texlive-manfnt-font-9:svn54684-61.fc38.noarch 753/890 Verifying : texlive-marginnote-9:svn48383-61.fc38.noarch 754/890 Verifying : texlive-marvosym-9:svn29349.2.2a-61.fc38.noarch 755/890 Verifying : texlive-mathpazo-9:svn52663-61.fc38.noarch 756/890 Verifying : texlive-mathspec-9:svn42773-61.fc38.noarch 757/890 Verifying : texlive-mathtools-9:svn58856-61.fc38.noarch 758/890 Verifying : texlive-mdwtools-9:svn15878.1.05.4-61.fc38.noarc 759/890 Verifying : texlive-memoir-9:svn58666-61.fc38.noarch 760/890 Verifying : texlive-metalogo-9:svn18611.0.12-61.fc38.noarch 761/890 Verifying : texlive-mflogo-font-9:svn54512-61.fc38.noarch 762/890 Verifying : texlive-mflogo-9:svn42428-61.fc38.noarch 763/890 Verifying : texlive-mfnfss-9:svn46036-61.fc38.noarch 764/890 Verifying : texlive-microtype-9:svn58394-61.fc38.noarch 765/890 Verifying : texlive-minitoc-9:svn48196-61.fc38.noarch 766/890 Verifying : texlive-mnsymbol-9:svn18651.1.4-61.fc38.noarch 767/890 Verifying : texlive-modes-9:svn56303-61.fc38.noarch 768/890 Verifying : texlive-mparhack-9:svn59066-61.fc38.noarch 769/890 Verifying : texlive-ms-9:svn57473-61.fc38.noarch 770/890 Verifying : texlive-multido-9:svn18302.1.42-61.fc38.noarch 771/890 Verifying : texlive-natbib-9:svn20668.8.31b-61.fc38.noarch 772/890 Verifying : texlive-ncntrsbk-9:svn31835.0-61.fc38.noarch 773/890 Verifying : texlive-newfloat-9:svn52906-61.fc38.noarch 774/890 Verifying : texlive-notoccite-9:svn18129.0-61.fc38.noarch 775/890 Verifying : texlive-ntgclass-9:svn56959-61.fc38.noarch 776/890 Verifying : texlive-pagesel-9:svn56105-61.fc38.noarch 777/890 Verifying : texlive-palatino-9:svn31835.0-61.fc38.noarch 778/890 Verifying : texlive-paralist-9:svn43021-61.fc38.noarch 779/890 Verifying : texlive-parallel-9:svn15878.0-61.fc38.noarch 780/890 Verifying : texlive-parskip-9:svn58358-61.fc38.noarch 781/890 Verifying : texlive-pdfcolmk-9:svn52912-61.fc38.noarch 782/890 Verifying : texlive-pdfescape-9:svn53082-61.fc38.noarch 783/890 Verifying : texlive-pdflscape-9:svn53047-61.fc38.noarch 784/890 Verifying : texlive-pdfmanagement-testphase-9:svn59194-61.fc 785/890 Verifying : texlive-pdfpages-9:svn58212-61.fc38.noarch 786/890 Verifying : texlive-pdftexcmds-9:svn55777-61.fc38.noarch 787/890 Verifying : texlive-pgf-9:svn57240-61.fc38.noarch 788/890 Verifying : texlive-picture-9:svn54867-61.fc38.noarch 789/890 Verifying : texlive-placeins-9:svn19848.2.2-61.fc38.noarch 790/890 Verifying : texlive-plain-9:svn57963-61.fc38.noarch 791/890 Verifying : texlive-polyglossia-9:svn58869-61.fc38.noarch 792/890 Verifying : texlive-psfrag-9:svn15878.3.04-61.fc38.noarch 793/890 Verifying : texlive-pslatex-9:svn57434-61.fc38.noarch 794/890 Verifying : texlive-psnfss-9:svn54694-61.fc38.noarch 795/890 Verifying : texlive-pspicture-9:svn15878.0-61.fc38.noarch 796/890 Verifying : texlive-pst-3d-9:svn17257.1.10-61.fc38.noarch 797/890 Verifying : texlive-pst-coil-9:svn37377.1.07-61.fc38.noarch 798/890 Verifying : texlive-pst-eps-9:svn15878.1.0-61.fc38.noarch 799/890 Verifying : texlive-pst-fill-9:svn15878.1.01-61.fc38.noarch 800/890 Verifying : texlive-pst-grad-9:svn15878.1.06-61.fc38.noarch 801/890 Verifying : texlive-pst-math-9:svn49425-61.fc38.noarch 802/890 Verifying : texlive-pst-node-9:svn54687-61.fc38.noarch 803/890 Verifying : texlive-pst-ovl-9:svn54963-61.fc38.noarch 804/890 Verifying : texlive-pst-plot-9:svn54080-61.fc38.noarch 805/890 Verifying : texlive-pst-text-9:svn49542-61.fc38.noarch 806/890 Verifying : texlive-pst-tools-9:svn54518-61.fc38.noarch 807/890 Verifying : texlive-pst-tree-9:svn43272-61.fc38.noarch 808/890 Verifying : texlive-pstricks-add-9:svn53763-61.fc38.noarch 809/890 Verifying : texlive-pstricks-9:svn58371-61.fc38.noarch 810/890 Verifying : texlive-pxfonts-9:svn15878.0-61.fc38.noarch 811/890 Verifying : texlive-qstest-9:svn15878.0-61.fc38.noarch 812/890 Verifying : texlive-ragged2e-9:svn57638-61.fc38.noarch 813/890 Verifying : texlive-rcs-9:svn15878.0-61.fc38.noarch 814/890 Verifying : texlive-realscripts-9:svn56594-61.fc38.noarch 815/890 Verifying : texlive-refcount-9:svn53164-61.fc38.noarch 816/890 Verifying : texlive-rerunfilecheck-9:svn54841-61.fc38.noarch 817/890 Verifying : texlive-rsfs-9:svn15878.0-61.fc38.noarch 818/890 Verifying : texlive-sansmath-9:svn17997.1.1-61.fc38.noarch 819/890 Verifying : texlive-sansmathaccent-9:svn53628-61.fc38.noarch 820/890 Verifying : texlive-sauerj-9:svn15878.0-61.fc38.noarch 821/890 Verifying : texlive-scheme-basic-9:svn54191-61.fc38.noarch 822/890 Verifying : texlive-section-9:svn20180.0-61.fc38.noarch 823/890 Verifying : texlive-seminar-9:svn34011.1.62-61.fc38.noarch 824/890 Verifying : texlive-sepnum-9:svn20186.2.0-61.fc38.noarch 825/890 Verifying : texlive-setspace-9:svn24881.6.7a-61.fc38.noarch 826/890 Verifying : texlive-showexpl-9:svn57414-61.fc38.noarch 827/890 Verifying : texlive-soul-9:svn56495-61.fc38.noarch 828/890 Verifying : texlive-stringenc-9:svn52982-61.fc38.noarch 829/890 Verifying : texlive-subfig-9:svn15878.1.3-61.fc38.noarch 830/890 Verifying : texlive-symbol-9:svn31835.0-61.fc38.noarch 831/890 Verifying : texlive-tex-gyre-math-9:svn41264-61.fc38.noarch 832/890 Verifying : texlive-tex-gyre-9:svn48058-61.fc38.noarch 833/890 Verifying : texlive-tex-ini-files-9:svn40533-61.fc38.noarch 834/890 Verifying : texlive-texlive-common-doc-9:svn54176-61.fc38.no 835/890 Verifying : texlive-texlive-msg-translations-9:svn59096-61.f 836/890 Verifying : texlive-textcase-9:svn52092-61.fc38.noarch 837/890 Verifying : texlive-times-9:svn35058.0-61.fc38.noarch 838/890 Verifying : texlive-tipa-9:svn29349.1.3-61.fc38.noarch 839/890 Verifying : texlive-titlesec-9:svn52413-61.fc38.noarch 840/890 Verifying : texlive-tools-9:svn56514-61.fc38.noarch 841/890 Verifying : texlive-translator-9:svn56052-61.fc38.noarch 842/890 Verifying : texlive-transparent-9:svn52981-61.fc38.noarch 843/890 Verifying : texlive-txfonts-9:svn15878.0-61.fc38.noarch 844/890 Verifying : texlive-typehtml-9:svn17134.0-61.fc38.noarch 845/890 Verifying : texlive-ucharcat-9:svn38907-61.fc38.noarch 846/890 Verifying : texlive-ucs-9:svn35853.2.2-61.fc38.noarch 847/890 Verifying : texlive-underscore-9:svn18261.0-61.fc38.noarch 848/890 Verifying : texlive-unicode-data-9:svn56768-61.fc38.noarch 849/890 Verifying : texlive-unicode-math-9:svn56594-61.fc38.noarch 850/890 Verifying : texlive-uniquecounter-9:svn53162-61.fc38.noarch 851/890 Verifying : texlive-url-9:svn32528.3.4-61.fc38.noarch 852/890 Verifying : texlive-utopia-9:svn15878.0-61.fc38.noarch 853/890 Verifying : texlive-varwidth-9:svn24104.0.92-61.fc38.noarch 854/890 Verifying : texlive-wasy-9:svn53533-61.fc38.noarch 855/890 Verifying : texlive-wasy-type1-9:svn53534-61.fc38.noarch 856/890 Verifying : texlive-wasysym-9:svn54080-61.fc38.noarch 857/890 Verifying : texlive-xcolor-9:svn41044-61.fc38.noarch 858/890 Verifying : texlive-xetexconfig-9:svn45845-61.fc38.noarch 859/890 Verifying : texlive-xifthen-9:svn38929-61.fc38.noarch 860/890 Verifying : texlive-xkeyval-9:svn57006-61.fc38.noarch 861/890 Verifying : texlive-xltxtra-9:svn56594-61.fc38.noarch 862/890 Verifying : texlive-xpatch-9:svn54563-61.fc38.noarch 863/890 Verifying : texlive-xstring-9:svn49946-61.fc38.noarch 864/890 Verifying : texlive-xtab-9:svn23347.2.3f-61.fc38.noarch 865/890 Verifying : texlive-xunicode-9:svn30466.0.981-61.fc38.noarch 866/890 Verifying : texlive-zapfchan-9:svn31835.0-61.fc38.noarch 867/890 Verifying : texlive-zapfding-9:svn31835.0-61.fc38.noarch 868/890 Verifying : texlive-zref-9:svn56611-61.fc38.noarch 869/890 Verifying : urw-base35-bookman-fonts-20200910-15.fc37.noarch 870/890 Verifying : urw-base35-c059-fonts-20200910-15.fc37.noarch 871/890 Verifying : urw-base35-d050000l-fonts-20200910-15.fc37.noarc 872/890 Verifying : urw-base35-fonts-20200910-15.fc37.noarch 873/890 Verifying : urw-base35-fonts-common-20200910-15.fc37.noarch 874/890 Verifying : urw-base35-gothic-fonts-20200910-15.fc37.noarch 875/890 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-15.fc37 876/890 Verifying : urw-base35-nimbus-roman-fonts-20200910-15.fc37.n 877/890 Verifying : urw-base35-nimbus-sans-fonts-20200910-15.fc37.no 878/890 Verifying : urw-base35-p052-fonts-20200910-15.fc37.noarch 879/890 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-15 880/890 Verifying : urw-base35-z003-fonts-20200910-15.fc37.noarch 881/890 Verifying : vim-filesystem-2:9.0.828-1.fc38.noarch 882/890 Verifying : vulkan-headers-1.3.231.1-1.fc38.noarch 883/890 Verifying : vulkan-loader-1.3.231.1-2.fc38.x86_64 884/890 Verifying : vulkan-loader-devel-1.3.231.1-2.fc38.x86_64 885/890 Verifying : woff2-1.0.2-15.fc37.x86_64 886/890 Verifying : xkeyboard-config-2.36-2.fc37.noarch 887/890 Verifying : xorg-x11-proto-devel-2022.2-2.fc38.noarch 888/890 Verifying : xorg-x11-server-Xvfb-1.20.14-9.fc38.x86_64 889/890 Verifying : xorg-x11-server-common-1.20.14-9.fc38.x86_64 890/890 Installed: Lmod-8.7.14-1.fc38.x86_64 MUMPS-5.5.1-1.fc38.x86_64 MUMPS-common-5.5.1-1.fc38.noarch adobe-mappings-cmap-20190730-4.fc38.noarch adobe-mappings-cmap-deprecated-20190730-4.fc38.noarch adobe-mappings-pdf-20190401-2.fc38.noarch alsa-lib-1.2.8-1.fc38.x86_64 annobin-docs-10.92-1.fc38.noarch annobin-plugin-gcc-10.92-1.fc38.x86_64 autoconf-2.71-4.fc38.noarch automake-1.16.5-9.fc38.noarch avahi-libs-0.8-17.fc38.x86_64 biber-2.18-1.fc38.noarch boost-1.78.0-9.fc37.x86_64 boost-atomic-1.78.0-9.fc37.x86_64 boost-chrono-1.78.0-9.fc37.x86_64 boost-container-1.78.0-9.fc37.x86_64 boost-context-1.78.0-9.fc37.x86_64 boost-contract-1.78.0-9.fc37.x86_64 boost-coroutine-1.78.0-9.fc37.x86_64 boost-date-time-1.78.0-9.fc37.x86_64 boost-devel-1.78.0-9.fc37.x86_64 boost-fiber-1.78.0-9.fc37.x86_64 boost-filesystem-1.78.0-9.fc37.x86_64 boost-graph-1.78.0-9.fc37.x86_64 boost-iostreams-1.78.0-9.fc37.x86_64 boost-json-1.78.0-9.fc37.x86_64 boost-locale-1.78.0-9.fc37.x86_64 boost-log-1.78.0-9.fc37.x86_64 boost-math-1.78.0-9.fc37.x86_64 boost-nowide-1.78.0-9.fc37.x86_64 boost-numpy3-1.78.0-9.fc37.x86_64 boost-program-options-1.78.0-9.fc37.x86_64 boost-python3-1.78.0-9.fc37.x86_64 boost-random-1.78.0-9.fc37.x86_64 boost-regex-1.78.0-9.fc37.x86_64 boost-serialization-1.78.0-9.fc37.x86_64 boost-stacktrace-1.78.0-9.fc37.x86_64 boost-system-1.78.0-9.fc37.x86_64 boost-test-1.78.0-9.fc37.x86_64 boost-thread-1.78.0-9.fc37.x86_64 boost-timer-1.78.0-9.fc37.x86_64 boost-type_erasure-1.78.0-9.fc37.x86_64 boost-wave-1.78.0-9.fc37.x86_64 byte-buddy-1.12.10-2.fc38.noarch byte-buddy-agent-1.12.10-2.fc38.noarch bzip2-devel-1.0.8-12.fc38.x86_64 cairo-1.17.6-2.fc37.x86_64 cairo-gobject-1.17.6-2.fc37.x86_64 cdparanoia-libs-10.2-40.fc38.x86_64 clang-libs-15.0.4-1.fc38.x86_64 clang-resource-filesystem-15.0.4-1.fc38.x86_64 cliquer-libs-1.22-4.fc38.x86_64 cmake-3.25.0-0.6.rc4.fc38.x86_64 cmake-data-3.25.0-0.6.rc4.fc38.noarch cmake-filesystem-3.25.0-0.6.rc4.fc38.x86_64 cmake-rpm-macros-3.25.0-0.6.rc4.fc38.noarch coin-or-Cbc-2.10.5-10.fc38.x86_64 coin-or-Cbc-devel-2.10.5-10.fc38.x86_64 coin-or-Cgl-0.60.3-7.fc38.x86_64 coin-or-Cgl-devel-0.60.3-7.fc38.x86_64 coin-or-Clp-1.17.6-10.fc38.x86_64 coin-or-Clp-devel-1.17.6-10.fc38.x86_64 coin-or-CoinUtils-2.11.4-7.fc38.x86_64 coin-or-CoinUtils-devel-2.11.4-7.fc38.x86_64 coin-or-Osi-0.108.6-6.fc38.x86_64 coin-or-Osi-devel-0.108.6-6.fc38.x86_64 coin-or-Sample-1.2.12-6.fc38.noarch copy-jdk-configs-4.1-1.fc38.noarch cpp-12.2.1-3.fc38.x86_64 crypto-policies-scripts-20221110-1.git87a75f4.fc38.noarch cups-libs-1:2.4.2-5.fc38.x86_64 dbus-libs-1:1.14.4-1.fc38.x86_64 dejavu-sans-fonts-2.37-19.fc38.noarch desktop-file-utils-0.26-7.fc37.x86_64 dos2unix-7.4.3-2.fc38.x86_64 doxygen-2:1.9.5-2.fc38.x86_64 eigen3-devel-3.4.0-8.fc38.noarch emacs-filesystem-1:28.1-3.fc37.noarch expat-2.4.8-2.fc38.x86_64 flexiblas-3.2.1-2.fc38.x86_64 flexiblas-netlib-3.2.1-2.fc38.x86_64 flexiblas-openblas-openmp-3.2.1-2.fc38.x86_64 fontconfig-2.14.1-1.fc38.x86_64 fonts-filesystem-1:2.0.5-9.fc38.noarch freetype-2.12.1-3.fc38.x86_64 fribidi-1.0.12-2.fc38.x86_64 gc-8.2.2-1.fc38.x86_64 gcc-12.2.1-3.fc38.x86_64 gcc-c++-12.2.1-3.fc38.x86_64 gcc-gfortran-12.2.1-3.fc38.x86_64 gcc-plugin-annobin-12.2.1-3.fc38.x86_64 gd-2.3.3-8.fc38.x86_64 gdk-pixbuf2-2.42.10-1.fc38.x86_64 gecode-6.2.0-10.fc38.x86_64 ghostscript-9.56.1-5.fc38.x86_64 ghostscript-tools-fonts-9.56.1-5.fc38.x86_64 ghostscript-tools-printing-9.56.1-5.fc38.x86_64 glib2-2.74.1-2.fc38.x86_64 glibc-devel-2.36.9000-13.fc38.x86_64 glibc-headers-x86-2.36.9000-13.fc38.noarch glpk-5.0-5.fc38.x86_64 glpk-devel-5.0-5.fc38.x86_64 glx-utils-8.4.0-14.20210504git0f9e7d9.fc38.x86_64 gnuplot-5.4.5-1.fc38.x86_64 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libXrender-0.9.11-1.fc38.x86_64 libXt-1.2.1-3.fc38.x86_64 libXtst-1.2.4-1.fc38.x86_64 libXv-1.0.11-17.fc38.x86_64 libXxf86vm-1.1.5-1.fc38.x86_64 libaec-1.0.6-3.fc37.x86_64 libaec-devel-1.0.6-3.fc37.x86_64 libaom-3.5.0-1.fc38.x86_64 libappstream-glib-0.8.2-1.fc38.x86_64 libavif-0.11.1-1.fc38.x86_64 libb2-0.98.1-7.fc38.x86_64 libcerf-2.1-2.fc37.x86_64 libdatrie-0.2.13-4.fc38.x86_64 libdav1d-1.0.0-2.fc37.x86_64 libdrm-2.4.114-1.fc38.x86_64 libedit-3.1-43.20221009cvs.fc38.x86_64 libevdev-1.13.0-1.fc37.x86_64 libfontenc-1.1.6-1.fc38.x86_64 libgfortran-12.2.1-3.fc38.x86_64 libglvnd-1:1.5.0-1.fc38.x86_64 libglvnd-core-devel-1:1.5.0-1.fc38.x86_64 libglvnd-devel-1:1.5.0-1.fc38.x86_64 libglvnd-egl-1:1.5.0-1.fc38.x86_64 libglvnd-gles-1:1.5.0-1.fc38.x86_64 libglvnd-glx-1:1.5.0-1.fc38.x86_64 libglvnd-opengl-1:1.5.0-1.fc38.x86_64 libgs-9.56.1-5.fc38.x86_64 libgudev-237-3.fc37.x86_64 libicu-71.1-2.fc38.x86_64 libicu-devel-71.1-2.fc38.x86_64 libijs-0.35-16.fc38.x86_64 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zziplib-0.13.72-2.fc38.x86_64 Complete! Finish: build setup for openms-2.8.0-0.3.fc38.src.rpm Start: rpmbuild openms-2.8.0-0.3.fc38.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1660780800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.IRAK2k + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf OpenMS-2.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/OpenMS-2.8.0-src.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd OpenMS-2.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf cmake/MacOSX + dos2unix share/OpenMS/SIMULATION/FASTAProteinAbundanceSampling.py dos2unix: converting file share/OpenMS/SIMULATION/FASTAProteinAbundanceSampling.py to Unix format... Patch #0 (openms-remove_testflag.patch): + echo 'Patch #0 (openms-remove_testflag.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file src/tests/class_tests/openms/CMakeLists.txt Patch #1 (openms-bug5864.patch): + echo 'Patch #1 (openms-bug5864.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file src/openms/source/QC/MQEvidenceExporter.cpp + sed -e 's| ||g' -i share/OpenMS/DESKTOP/TOPPAS.appdata.xml share/OpenMS/DESKTOP/TOPPView.appdata.xml + find . -type f -name '*.h' -exec chmod 0644 '{}' ';' + find . -type f -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.yHHOLv + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + mkdir -p build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ gcc -dumpversion + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -B build -S ./ -DCMAKE_CXX_COMPILER_VERSION:STRING=12 -DENABLE_UPDATE_CHECK:BOOL=OFF -DCMAKE_COLOR_MAKEFILE:BOOL=ON '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '-DCMAKE_C_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' -DCMAKE_BUILD_TYPE=Release -DBoost_IOSTREAMS_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_iostreams.so -DBoost_MATH_C99_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_math_c99.so -DBoost_REGEX_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_regex.so -DXercesC_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libxerces-c.so -DCMAKE_VERBOSE_MAKEFILE=TRUE -DCMAKE_PREFIX_PATH=/usr -DENABLE_SVN=OFF -DBOOST_USE_STATIC=OFF -DCMAKE_SKIP_RPATH:BOOL=NO -DCMAKE_SKIP_INSTALL_RPATH:BOOL=NO -DMT_ENABLE_OPENMP=ON -DENABLE_GCC_WERROR:BOOL=OFF -DPERCOLATOR_BINARY:FILEPATH=/usr/bin/percolator -DBOOST_USE_STATIC:BOOL=OFF -DBoost_INCLUDE_DIR:PATH=/usr/include -DENABLE_TUTORIALS:BOOL=OFF -DENABLE_UNITYBUILD:BOOL=OFF -DHAS_XSERVER:BOOL=OFF -DCMAKE_INSTALL_PREFIX=/usr -DINSTALL_BIN_DIR:PATH=bin -DINSTALL_CMAKE_DIR:PATH=lib64/cmake/OpenMS -DINSTALL_DOC_DIR:PATH=share/doc/openms-doc -DINSTALL_INCLUDE_DIR:PATH=include -DINSTALL_LIB_DIR:PATH=lib64/OpenMS -DINSTALL_SHARE_DIR:PATH=share/OpenMS -DPACKAGE_TYPE:STRING=none -DWITH_GUI:BOOL=ON -DXercesC_INCLUDE_DIRS:PATH=/usr/include/xercesc -DOPENMS_DISABLE_UPDATE_CHECK:BOOL=OFF -DENABLE_UPDATE_CHECK:BOOL=OFF -DGIT_TRACKING:BOOL=OFF -DOPENMS_64BIT_ARCHITECTURE:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DBUILD_EXAMPLES:BOOL=OFF -DENABLE_TOPP_TESTING:BOOL=OFF -DENABLE_CLASS_TESTING:BOOL=OFF -DPYOPENMS=OFF -- The C compiler identification is GNU 12.2.1 -- The CXX compiler identification is GNU 12.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Building OpenMS 2.8.0 -- [CMake is not tracking Git commits and branching ('-D GIT_TRACKING=Off')] CMake Warning at cmake/setup_lib_find_paths.cmake:46 (message): Unless you are certain that you have all contributing libraries in system paths, please specify an explicit path to the built contrib libraries via -DOPENMS_CONTRIB_LIBS Call Stack (most recent call first): CMakeLists.txt:180 (include) -- OpenMP support requested: ON -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Architecture: 64 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Found XercesC: /usr/lib64/libxerces-c.so (found version "3.2.3") -- Found Boost: /usr/include (found suitable version "1.78.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.78.0 -- Found LIBSVM: /usr/lib64/libsvm.so (found suitable version "3.3.0", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib64/libglpk.so -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.12") -- Found BZip2: /usr/lib64/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found WM5: /usr/include/WildMagic -- Found SQLite3: /usr/include (found suitable version "3.39.4", minimum required is "3.15.0") -- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.12.1") found components: C CXX -- Found Qt 5.15.7 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost: /usr/include (found suitable version "1.78.0", minimum required is "1.48.0") -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.5") found components: doxygen dot -- Disabled tutorials (-D ENABLE_TUTORIALS=Off). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP ENABLE_SVN INCLUDE_INSTALL_DIR INSTALL_CMAKE_DIR LIB_INSTALL_DIR LIB_SUFFIX OPENMS_DISABLE_UPDATE_CHECK PERCOLATOR_BINARY SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/OpenMS-2.8.0/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 OpenMS TOPP UTILS GUI -C build make: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 OpenMS make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 56 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS 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-fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS 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-fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS 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-fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS 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CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -Wl,-rpath,::::::::::::::: make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make 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"SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SEQUENCE/NeedlemanWunsch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AdductInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/OSWData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtilsSimple.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringView.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabMFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFileLoad.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSFileStore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamCTDFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TriqlerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/FAIMSHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/IMDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/IONMOBILITY/IMTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/InputFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/Observation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ObservationMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ObservationMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FeatureSummary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/IdentificationSummary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MQEvidenceExporter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PSMExplainedIonCurrent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/SpectrumCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/SearchEngineBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AdductInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FlagSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/OSWData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ParamValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringConversions.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtilsSimple.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringView.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GNPSMGFFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabM.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabMFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFileLoad.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSFileStore.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamCTDFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TriqlerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/FAIMSHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/IMDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/IONMOBILITY/IMTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentifiedMolecule.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FeatureSummary.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/IdentificationSummary.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MQEvidenceExporter.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PSMExplainedIonCurrent.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/SpectrumCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/WildMagic -I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include/OpenMS/build_config_Release.h /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include/OpenMS/build_config.h make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Exception.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Init.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/FuzzyStringComparator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/LogConfigHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/PrecisionWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/ProgressLogger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/RAIICleanup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/LogStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/SingletonRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/TypeAsString.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/Types.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/StreamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdIndexer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/UniqueIdInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CONCEPT/VersionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/ExternalProcess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/FileWatcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/JavaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/NetworkGetRequest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/PythonInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/StopWatch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/RWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/SysInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include 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-Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SYSTEM/UpdateCheck.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include 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-m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GaussFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem 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-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/Histogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/LinearRegression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/ROCCurve.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/BilinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/CubicSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/BSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/GridSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/LinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/MathFunctions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/MSNumpress.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSAC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/EmgGradientDescent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/SplineBisection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/MATH/MISC/NNLS/NNLS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Adduct.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ChargePair.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CalibrationData.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Compomer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVReference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/CVMappings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DPosition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DRange.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Date.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DataValue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DateTime.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FlagSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/FlagSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/LPWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Map.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/GridFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/MassExplainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Matrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/OSWData.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/OSWData.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ParamValue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ParamValue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/Param.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/QTCluster.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringView.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/String.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtilsSimple.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringUtilsSimple.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringConversions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/DATASTRUCTURES/StringConversions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Acquisition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AcquisitionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTermList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/CVTermListInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ContactPerson.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DataArrays.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ChromatogramSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Digestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DataProcessing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DocumentIDTagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/DocumentIdentifier.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Gradient.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/HPLC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Identification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IdentificationHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/InstrumentSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Instrument.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IonDetector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/IonSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MassAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MetaInfoRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Modification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideEvidence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MSQuantifications.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/MSQuantifications.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Precursor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Product.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/PeptideIdentification.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Sample.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SampleTreatment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ScanWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Software.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SourceFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/Tagging.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/SpectrumLookup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentificationData.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentifiedMolecule.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentifiedMolecule.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/AreaIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/ProcessingStep.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/BaseFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConversionHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/DPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ConsensusMap.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Feature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureHandle.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MassTrace.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MassTrace.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureMap.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/FeatureMap.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MRMFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MRMTransitionGroup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSExperiment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSExperiment.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSSpectrum.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Peak1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/Peak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/PeakIndex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/RangeManager.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/RichPeak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/StandardTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 23%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/MSChromatogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/KERNEL/SpectrumHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AdductInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/AdductInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/AASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/CrossLinksDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DecoyGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 25%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Element.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ElementDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationDefinition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModificationsDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedPeptideGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ModifiedPeptideGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/NASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ProteaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Residue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ResidueModification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ResidueDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RNaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Ribonucleotide.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/RNaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/Tagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/WeightWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ConsensusXMLHandler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ConsensusXMLHandler.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/FeatureXMLHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Base64.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Bzip2Ifstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/Bzip2InputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CachedMzML.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CachedMzML.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CompressedInputSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CVMappingFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/CsvFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DTA2DFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/DTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ControlledVocabulary.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ExperimentalDesignFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FASTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/EDTAFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/EDTAFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GzipIfstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GzipInputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/HDF5Connector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/GNPSMGFFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/GNPSMGFFile.cpp:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IdXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/KroenikFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/KroenikFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/LibSVMEncoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MS2File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSNumpressCoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotInfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotInfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MSstatsFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:184:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 184 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qobject.h:47, from /usr/include/qt5/QtCore/QObject:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(String(param_.getValue("username").toString()).toQString()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:190:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 190 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(String(param_.getValue("password").toString()).toQString()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:196:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 196 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:201:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 201 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:206:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 206 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:211:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 211 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:216:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 216 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:221:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 221 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:226:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 226 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:231:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 231 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:357:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 357 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp:362:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 362 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MsInspectFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SYSTEM/File.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzIdentMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 44%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQCFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzQCFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzQCFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTab.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabM.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabM.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabMFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/MzTabFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileLoad.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFileLoad.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileLoad.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSSACSVFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileStore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OMSFileStore.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSFileStore.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OMSSAXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ParamCTDFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 46%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/OSWFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ParamXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PTMXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PeakTypeEstimator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepNovoInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepNovoOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFileMascot.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PepXMLFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ProtXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SequestInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 48%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/QcMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/QcMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/QcMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/QcMLFile.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SequestOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqliteConnector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqMassFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SqMassFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SpecArrayFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SVOutStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TextFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TraMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TransformationXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/UnimodXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMassFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMassFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TriqlerFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TriqlerFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/TriqlerFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TriqlerFile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XTandemXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/ZlibCompression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMTypes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/IMTypes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMTypes.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FORMAT/XTandemInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/FAIMSHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/set:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/FAIMSHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/FAIMSHelper.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/IONMOBILITY/IMDataConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/IONMOBILITY/IMDataConverter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/IONMOBILITY/IMDataConverter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 51%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsotopeLabelingMDVs.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include 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-fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 53%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SEQUENCE/NeedlemanWunsch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 55%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/multi_index/detail/ord_index_impl.hpp:65, from /usr/include/boost/multi_index/ordered_index.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/InputFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/ProcessingStep.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:43: In function 'boost::multi_index::detail::ordered_index_node_impl >::increment(boost::multi_index::detail::ordered_index_node_impl >*&)', inlined from 'boost::multi_index::detail::ordered_index_node > >::increment(boost::multi_index::detail::ordered_index_node > >*&)' at /usr/include/boost/multi_index/detail/ord_index_node.hpp:656:26, inlined from 'boost::multi_index::detail::bidir_node_iterator > > >::operator++()' at /usr/include/boost/multi_index/detail/bidir_node_iterator.hpp:55:20, inlined from 'OpenMS::MapAlignmentTransformer::transformRetentionTimes(OpenMS::IdentificationData&, OpenMS::TransformationDescription const&, bool)' at /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:220:47: /usr/include/boost/multi_index/detail/ord_index_node.hpp:268:18: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 268 | if(x->right()!=pointer(0)){ | ~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/12/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/12/bits/allocator.h:46, from /usr/include/c++/12/vector:61: In member function 'std::__new_allocator > > >::deallocate(boost::multi_index::detail::ordered_index_node > >*, unsigned long)', inlined from 'std::allocator_traits > > > >::deallocate(std::allocator > > >&, boost::multi_index::detail::ordered_index_node > >*, unsigned long)' at /usr/include/c++/12/bits/alloc_traits.h:496:23, inlined from 'boost::multi_index::multi_index_container > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator >::deallocate_node(boost::multi_index::detail::ordered_index_node > >*)' at /usr/include/boost/multi_index_container.hpp:645:34, inlined from 'boost::multi_index::multi_index_container > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator >::delete_node_(boost::multi_index::detail::ordered_index_node > >*)' at /usr/include/boost/multi_index_container.hpp:956:20, inlined from 'boost::multi_index::multi_index_container > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator >::modify_(OpenMS::MapAlignmentTransformer::transformRetentionTimes(OpenMS::IdentificationData&, OpenMS::TransformationDescription const&, bool)::{lambda(OpenMS::IdentificationDataInternal::Observation&)#1}&, boost::multi_index::detail::ordered_index_node > >*)bool' at /usr/include/boost/multi_index_container.hpp:1041:21, inlined from 'boost::multi_index::detail::index_base > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator >::final_modify_(OpenMS::MapAlignmentTransformer::transformRetentionTimes(OpenMS::IdentificationData&, OpenMS::TransformationDescription const&, bool)::{lambda(OpenMS::IdentificationDataInternal::Observation&)#1}&, boost::multi_index::detail::ordered_index_node > >*)bool' at /usr/include/boost/multi_index/detail/index_base.hpp:312:28, inlined from 'boost::multi_index::detail::ordered_index_impl > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, std::less > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type> > >, boost::multi_index::detail::nth_layer<1, OpenMS::IdentificationDataInternal::Observation, boost::multi_index::indexed_by > > > >, &OpenMS::IdentificationDataInternal::Observation::input_file>, boost::multi_index::member, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>, mpl_::na, mpl_::na>, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na, mpl_::na>, std::allocator >, boost::mpl::vector0, boost::multi_index::detail::ordered_unique_tag, boost::multi_index::detail::null_augment_policy>::modify(boost::multi_index::detail::bidir_node_iterator > > >, OpenMS::MapAlignmentTransformer::transformRetentionTimes(OpenMS::IdentificationData&, OpenMS::TransformationDescription const&, bool)::{lambda(OpenMS::IdentificationDataInternal::Observation&)#1})bool' at /usr/include/boost/multi_index/detail/ord_index_impl.hpp:469:31, inlined from 'OpenMS::MapAlignmentTransformer::transformRetentionTimes(OpenMS::IdentificationData&, OpenMS::TransformationDescription const&, bool)' at /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:222:35: /usr/include/c++/12/bits/new_allocator.h:158:33: note: call to 'operator delete(void*, unsigned long)' here 158 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const stdmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/builmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' d/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMapper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/specfun.h:45, from /usr/include/c++/12/cmath:1935, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDRipper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/bits/refwrap.h:39, from /usr/include/c++/12/vector:66: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vemake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' ctor&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:50: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdenmake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' tification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedTargetDecoy.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static std::map > OpenMS::IDFilter::extractUnassignedProteins(OpenMS::ConsensusMap&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:261:50: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 261 | moveMatchingItems(prot.getHits(), std::not1(acc_filter), target.first->second); | ~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/12/bits/stl_tree.h:65: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:380:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 380 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:421:32: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 421 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::updateProteinReferences(std::vector&, const std::vector&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:464:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 464 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::removeUngroupedProteins(const std::vector&, std::vector&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:532:59: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 532 | std::remove_if(hits.begin(), hits.end(), std::not1(HasMatchingAccessionUnordered(valid_accessions))), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::moveMatchingItems(Container&, const Predicate&, Container&) [with Container = std::vector; Predicate = std::unary_negate >]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:261:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:551:73: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = unary_negate >]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 551 | auto part = std::partition(items.begin(), items.end(), std::not1(pred)); | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccessionUnordered]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:293:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(comake[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' nst _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinPeptideLength]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:601:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinPeptideLength]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinCharge]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:622:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinCharge]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasRTInRange]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:640:22: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasRTInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMZInRange]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:648:22: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMZInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasLowMZError]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:658:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasLowMZError]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:674:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:677:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingModification]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:726:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingModification]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingSequence]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/FILTERING/ID/IDFilter.cpp:754:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingSequence]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMetaboIdent.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o cd 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-isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms 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/usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:53, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:45: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DetectabilitySimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DetectabilitySimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DigestSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/DigestSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/EGHFitter1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/IonizationSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/IonizationSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/MSSim.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/MSSim.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/MSSim.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RTSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RTSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Contaminants.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Contaminants.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Contaminants.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FeatureSummary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FeatureSummary.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FeatureSummary.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FeatureSummary.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FeatureSummary.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FragmentMassError.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FragmentMassError.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/FWHM.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/FWHM.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/IdentificationSummary.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/IdentificationSummary.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MissedCleavages.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MissedCleavages.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MQEvidenceExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MQEvidenceExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MQEvidenceExporter.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MQEvidenceExporter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/istream:38, from /usr/include/c++/12/fstream:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MQEvidenceExporter.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2IdentificationRate.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/Ms2SpectrumStats.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/MzCalibration.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/MzCalibration.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/PeptideMass.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PeptideMass.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PSMExplainedIonCurrent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/PSMExplainedIonCurrent.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/PSMExplainedIonCurrent.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/QCBase.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/SpectrumCount.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/SpectrumCount.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/SpectrumCount.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/RTAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/RTAlignment.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/QCBase.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/QC/TIC.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/TIC.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/QC/DBSuitability.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/specfun.h:45, from /usr/include/c++/12/cmath:1935, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/stl_tree.h:63, from /usr/include/c++/12/map:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMap(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::TargetedExperiment&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:205:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 205 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:205:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMapPercRSD(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::MRMFeatureQC&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:399:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 399 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:399:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:46, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Peak1D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/istream:38, from /usr/include/c++/12/fstream:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ConsoleUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ParameterInformation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/INIUpdater.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/SearchEngineBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/SearchEngineBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/ToolHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/json -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/WildMagic -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp:55: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/source/APPLICATIONS/TOPPBase.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX shared library ../../lib/libOpenMS.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/OSWData.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GNPSMGFFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQCFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabM.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabMFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileLoad.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSFileStore.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamCTDFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TriqlerFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Built target OpenMS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Building CXX object src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -MF CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o.d -o CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Linking CXX executable ../../bin/BaselineFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/BaselineFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o -o ../../bin/BaselineFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Built target BaselineFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -MF CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d -o CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CometAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CometAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o -MF CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d -o CMakeFiles/CompNovo.dir/CompNovo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CompNovo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CompNovo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -MF CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 65%] Automatic MOC for target OpenMS_GUI cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/INTERFACES/IPeptideIds.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataConsensus.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataFeature.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataIdent.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/ExternalProcessMBox.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Painter1DBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVToolDiscovery.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TableView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISITORS/LayerStatistics.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisPainter.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ColorSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ListFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIATreeTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/FilterList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/HistogramWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp" AutoGen warning: "SRC:/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp" is empty. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFile.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFileList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataChrom.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataFeature.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataIdent.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerDataPeak.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerListView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ListEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LogWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/CommonDefs.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradient.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/OutputDirectory.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Painter1DBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ParamEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot1DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot2DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Plot3DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/PlotCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/PlotWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/RecentFilesMenu.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SequenceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASEdge.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResource.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResources.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASScene.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVControllerBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TVToolDiscovery.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TableView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ListFilterDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot1DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot2DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Plot3DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DataSelectionTabs.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBarWidgetInterface.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_DIATreeTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/FilterList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/InputFile.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LogWindow.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LayerListView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_LogWindow.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/LHKLGULMBE/moc_FilterableList.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot1DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot2DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DOpenGLCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Plot3DWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotCanvas.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/RecentFilesMenu.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_RecentFilesMenu.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SequenceVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_PlotWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIDViewTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraTreeTab.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVControllerBase.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewMenu.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVControllerBase.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVDIATreeTabController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVIdentificationViewController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TableView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TableView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TreeView.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TreeView.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TreeView.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TVSpectraViewController.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp.d" AutoMoc: Generating "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/qt5/QtSql -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtSvg -I/usr/include/qt5/QtWebEngineWidgets -I/usr/include/qt5/QtWebEngineCore -I/usr/include/qt5/QtQuick -I/usr/include/qt5/QtQmlModels -I/usr/include/qt5/QtQml -I/usr/include/qt5/QtWebChannel -I/usr/include/qt5/QtPositioning -I/usr/include/qt5/QtPrintSupport -I/usr/include -I/usr/include/c++/12 -I/usr/include/c++/12/x86_64-redhat-linux -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-redhat-linux/12/include -I/usr/local/include --output-dep-file -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target OpenMS_GUI_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CompNovoCID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CompNovoCID make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -MF CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target ConsensusMapNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -MF CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d -o CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -MF CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d -o CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/ConsensusID cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target ConsensusID make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/CruxAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target CruxAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o -MF CMakeFiles/Decharger.dir/Decharger.cpp.o.d -o CMakeFiles/Decharger.dir/Decharger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/Decharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target Decharger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -MF CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d -o CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Linking CXX executable ../../bin/DatabaseSuitability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Built target DatabaseSuitability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -MF CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d -o CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Linking CXX executable ../../bin/DTAExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 67%] Built target DTAExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -MF CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d -o CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/ExternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target ExternalCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 66%] Building CXX object src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -MF CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d -o CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/EICExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target EICExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -MF CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FalseDiscoveryRate make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -MF CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderCentroided make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -MF CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderIdentification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -MF CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d -o CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderIsotopeWavelet make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -MF CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Building CXX object src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -MF CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d -o CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 68%] Built target FeatureFinderMetabo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureFinderMRM cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureFinderMRM make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -MF CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureFinderMultiplex make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -MF CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d -o CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureLinkerLabeled make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target FeatureLinkerUnlabeledKD make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FeatureLinkerUnlabeled make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp:34: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FeatureLinkerUnlabeledQT make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -MF CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o.d -o CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FidoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FidoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o -o ../../bin/FidoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FidoAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o -MF CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d -o CMakeFiles/FileConverter.dir/FileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o -MF CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o -MF CMakeFiles/FileInfo.dir/FileInfo.cpp.o.d -o CMakeFiles/FileInfo.dir/FileInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/boost/iostreams/detail/ios.hpp:20, from /usr/include/boost/iostreams/device/null.hpp:18, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:63: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h: In instantiation of 'OpenMS::Math::SummaryStatistics::SummaryStatistics() [with T = std::vector]': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp:1491:49: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:702:30: warning: 'OpenMS::Math::SummaryStatistics >::min' will be initialized after [-Wreorder] 702 | typename T::value_type min, max; | ^~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:701:30: warning: 'double OpenMS::Math::SummaryStatistics >::lowerq' [-Wreorder] 701 | double mean, variance, lowerq, median, upperq; | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:674:7: warning: when initialized here [-Wreorder] 674 | SummaryStatistics() | ^~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FileInfo.dir/FileInfo.cpp.o -o ../../bin/FileInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -MF CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d -o CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPGenericWrapper::main_(int, const char**)': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp:508:18: warning: 'void QProcess::start(const QString&, QIODevice::OpenMode)' is deprecated: Use QProcess::start(const QString &program, const QStringList &arguments,OpenMode mode = ReadWrite) instead [-Wdeprecated-declarations] 508 | builder.start(call.toQString()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/QProcess:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp:47: /usr/include/qt5/QtCore/qprocess.h:168:10: note: declared here 168 | void start(const QString &command, OpenMode mode = ReadWrite); | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/GenericWrapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target GenericWrapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -MF CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d -o CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/GNPSExport cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target GNPSExport make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o -MF CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d -o CMakeFiles/FileMerger.dir/FileMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/FileMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libboost_regex.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target FileMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -MF CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d -o CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target HighResPrecursorMassCorrector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -MF CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d -o CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDConflictResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDConflictResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -MF CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o.d -o CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o -MF CMakeFiles/IDFilter.dir/IDFilter.cpp.o.d -o CMakeFiles/IDFilter.dir/IDFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxRank]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:927:28: required from 'static void OpenMS::IDFilter::filterHitsByRank(std::vector&, OpenMS::Size, OpenMS::Size) [with IdentificationType = OpenMS::PeptideIdentification; OpenMS::Size = long unsigned int]' /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp:620:33: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxRank]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o -o ../../bin/IDFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDFileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDFilter.dir/IDFilter.cpp.o -o ../../bin/IDFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o -MF CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d -o CMakeFiles/IDMapper.dir/IDMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDMapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -MF CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d -o CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o -MF CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d -o CMakeFiles/IDMerger.dir/IDMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDPosteriorErrorProbability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/IDMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target IDMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o -MF CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d -o CMakeFiles/IDRipper.dir/IDRipper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDRipper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDRipper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -MF CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d -o CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDRTCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDRTCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -MF CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -MF CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d -o CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/InternalCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target InternalCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target InclusionExclusionListCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -MF CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d -o CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:45: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IsobaricAnalyzer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -MF CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d -o CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/LuciphorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target LuciphorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -MF CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d -o CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -MF CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d -o CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerPoseClustering make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerIdentification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerIdentification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -MF CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -MF CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d -o CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerSpectrum make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target MapAlignerTreeGuided make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -MF CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d -o CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -MF CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d -o CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapRTTransformer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapRTTransformer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -MF CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d -o CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MapStatistics cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MapStatistics make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -MF CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d -o CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MaRaClusterAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -MF CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d -o CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPMascotAdapter::main_(int, const char**)': /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:563:28: warning: 'static int QProcess::execute(const QString&)' is deprecated: Use QProcess::execute(const QString &program, const QStringList &arguments) instead [-Wdeprecated-declarations] 563 | status = qp.execute(call.toQString()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/QProcess:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:53: /usr/include/qt5/QtCore/qprocess.h:265:16: note: declared here 265 | static int execute(const QString &command); | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp:42: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MascotAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MascotAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -MF CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MascotAdapterOnline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MascotAdapterOnline make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -MF CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -MF CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d -o CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MassTrace.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MRMMapper cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MRMMapper make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MassTraceExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MassTraceExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -MF CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d -o CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -MF CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d -o CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp:47: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MyriMatchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MyriMatchAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target MSGFPlusAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -MF CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d -o CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target NoiseFilterGaussian make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -MF CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d -o CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -MF CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target NoiseFilterSGolay make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MzTabExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MzTabExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -MF CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d -o CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXL.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -MF CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d -o CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:50: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OMSSAAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/OpenPepXL cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target OpenPepXL make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/OMSSAAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target OMSSAAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -MF CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d -o CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenPepXLLF.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/OpenPepXLLF cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target OpenPepXLLF make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -MF CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d -o CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAnalyzer.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathAnalyzer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -MF CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d -o CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathAssayGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathAssayGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -MF CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d -o CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/bits/specfun.h:45, from /usr/include/c++/12/cmath:1935, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathConfidenceScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -MF CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathChromatogramExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -MF CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d -o CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathDecoyGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -MF CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d -o CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -MF CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d -o CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:49, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathFeatureXMLToTSV make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenSwathRTNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -MF CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d -o CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -MF CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d -o CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerWavelet.cpp:34: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerHiRes cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerHiRes make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerWavelet cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerWavelet make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -MF CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d -o CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeptideIndexer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeptideIndexer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeptideIndexer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -MF CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d -o CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PepNovoAdapter.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PepNovoAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PepNovoAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -MF CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d -o CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PercolatorAdapter.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -MF CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d -o CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PhosphoScoring.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PhosphoScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PhosphoScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PercolatorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PercolatorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -MF CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d -o CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorIonSelector.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -MF CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d -o CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PrecursorMassCorrector.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PrecursorIonSelector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PrecursorIonSelector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target PrecursorMassCorrector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -MF CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d -o CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinInference.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/ProteinInference cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target ProteinInference make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -MF CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d -o CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinQuantifier.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Linking CXX executable ../../bin/ProteinQuantifier cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target ProteinQuantifier make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -MF CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d -o CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ProteinResolver.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/ProteinResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target ProteinResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Building CXX object src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o -MF CMakeFiles/PTModel.dir/PTModel.cpp.o.d -o CMakeFiles/PTModel.dir/PTModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o -MF CMakeFiles/PTPredict.dir/PTPredict.cpp.o.d -o CMakeFiles/PTPredict.dir/PTPredict.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PTPredict.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/PTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target PTModel make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/PTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target PTPredict make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o -MF CMakeFiles/RTModel.dir/RTModel.cpp.o.d -o CMakeFiles/RTModel.dir/RTModel.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o -MF CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d -o CMakeFiles/QualityControl.dir/QualityControl.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/QualityControl.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/RTModel cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RTModel make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/QualityControl cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target QualityControl make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o -MF CMakeFiles/RTPredict.dir/RTPredict.cpp.o.d -o CMakeFiles/RTPredict.dir/RTPredict.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/RTPredict.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -MF CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d -o CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SeedListGenerator.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/RTPredict cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTPredict.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RTPredict make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SeedListGenerator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SeedListGenerator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -MF CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d -o CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp:41: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterBernNorm.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpectraFilterBernNorm make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -MF CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d -o CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpecLibSearcher.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -MF CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d -o CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterMarkerMower.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterMarkerMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpecLibSearcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpecLibSearcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -MF CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNLargest.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterNLargest make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -MF CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d -o CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterNormalizer.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterNormalizer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -MF CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterParentPeakMower.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterParentPeakMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -MF CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d -o CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterScaler.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterScaler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterScaler make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -MF CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d -o CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterSqrtMower.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target SpectraFilterSqrtMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -MF CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d -o CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterThresholdMower.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraFilterThresholdMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -MF CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d -o CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraFilterWindowMower.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraFilterWindowMower make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -MF CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d -o CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/SpectraMerger.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/SpectraMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target SpectraMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o -MF CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d -o CMakeFiles/TextExporter.dir/TextExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp:43: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TextExporter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/TextExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target TextExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -MF CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d -o CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/TOFCalibration.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Linking CXX executable ../../bin/TOFCalibration cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target TOFCalibration make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o -MF CMakeFiles/XFDR.dir/XFDR.cpp.o.d -o CMakeFiles/XFDR.dir/XFDR.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XFDR.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Building CXX object src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -MF CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d -o CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp:48: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/APPLICATIONS/SearchEngineBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/XTandemAdapter.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Linking CXX executable ../../bin/XFDR cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XFDR.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/XFDR.dir/XFDR.cpp.o -o ../../bin/XFDR -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Built target XFDR make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_TheoreticalSpectrumGenerationDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TheoreticalSpectrumGenerationDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating qrc_resources.cpp cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/rcc --name resources --output /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/qrc_resources.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ICONS/resources.qrc make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_DataFilterDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_DataFilterDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_FeatureEditDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FeatureEditDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Generating ui_FilterList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FilterList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/FilterList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_FilterableList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_FilterableList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_InputFile.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_InputFile.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_InputFileList.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_InputFileList.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFileList.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_LayerStatisticsDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_LayerStatisticsDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_ListFilterDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_ListFilterDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ListFilterDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_OutputDirectory.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_OutputDirectory.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_ParamEditor.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_ParamEditor.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot1DGoToDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot1DGoToDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot1DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot1DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Generating ui_Plot2DGoToDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot2DGoToDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_Plot2DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot2DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_Plot3DPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_Plot3DPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_PythonModuleRequirement.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_PythonModuleRequirement.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_PythonSelector.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_PythonSelector.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SequenceVisualizer.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SequenceVisualizer.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SequenceVisualizer.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SpectrumAlignmentDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SpectrumAlignmentDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathLibraryStats.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathLibraryStats.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SwathLibraryStats.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathTabWidget.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathTabWidget.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_SwathWizardBase.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_SwathWizardBase.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASIOMappingDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASIOMappingDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASInputFileDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASInputFileDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASInputFilesDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASInputFilesDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASOutputFilesDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASOutputFilesDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPASVertexNameDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPASVertexNameDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPViewOpenDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPViewOpenDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Generating ui_TOPPViewPrefDialog.h cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/ui_TOPPViewPrefDialog.h /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Linking CXX executable ../../bin/XTandemAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fopenmp CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target XTandemAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/../../../../../src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp:10, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:6: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/memory:63, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp:9, from /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp:2: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: In member function 'virtual void OpenMS::Annotation1DPeakItem::draw(OpenMS::Plot1DCanvas*, QPainter&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtGui/qmatrix.h:47, from /usr/include/qt5/QtGui/qbrush.h:49, from /usr/include/qt5/QtGui/qpen.h:45, from /usr/include/qt5/QtGui/QPen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:51: /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: In member function 'virtual void OpenMS::Annotation1DCaret::draw(OpenMS::Plot1DCanvas*, QPainter&, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtGui/qmatrix.h:47, from /usr/include/qt5/QtGui/qtransform.h:43, from /usr/include/qt5/QtGui/qstatictext.h:48, from /usr/include/qt5/QtGui/QStaticText:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:40: /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In static member function 'static OpenMS::TOPPASTreeView* OpenMS::TOPPASBase::createTOPPToolsTreeWidget(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:485:52: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 485 | QStringList category_list = category_set.toList(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46, from /usr/include/qt5/QtWidgets/qtreeview.h:44, from /usr/include/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:35: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:486:10: warning: 'void qSort(Container&) [with Container = QStringList]' is deprecated: Use std::sort [-Wdeprecated-declarations] 486 | qSort(category_list); | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qlist.h:43, from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qmdiarea.h:44, from /usr/include/qt5/QtWidgets/QMdiArea:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:42: /usr/include/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In member function 'void OpenMS::TOPPASBase::openFilesInTOPPView(QStringList)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qobject.h:47: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1513:66: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 1513 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In constructor 'OpenMS::TOPPViewBase::TOPPViewBase(TOOL_SCAN, QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:132:68: warning: 'const QRect QDesktopWidget::screenGeometry(int) const' is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 132 | QRect screen_geometry = QApplication::desktop()->screenGeometry(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtWidgets/QtWidgets:58, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:48: /usr/include/qt5/QtWidgets/qdesktopwidget.h:79:67: note: declared here 79 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect screenGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:83: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:234:38: note: in expansion of macro 'CONNECTCAST' 234 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QtWidgets:27: /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:234:38: note: in expansion of macro 'CONNECTCAST' 234 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:269:29: note: in expansion of macro 'CONNECTCAST' 269 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/CommonDefs.h:46:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 46 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:269:29: note: in expansion of macro 'CONNECTCAST' 269 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'OpenMS::PlotWidget* OpenMS::TOPPViewBase::getActivePlotWidget() const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1493:14: warning: comparison of integer expressions of different signedness: 'const int' and 'OpenMS::Size' {aka 'long unsigned int'} [-Wsign-compare] 1493 | if (id < (Size) ws_.subWindowList().size()) | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::runTOPPTool_()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1853:24: warning: 'int QTime::restart()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1853 | topp_.timer.restart(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/FilterList.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:46: /usr/include/qt5/QtCore/qdatetime.h:236:54: note: declared here 236 | QT_DEPRECATED_X("Use QElapsedTimer instead") int restart(); | ^~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::finishTOPPToolExecution(int, QProcess::ExitStatus)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:1892:79: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1892 | QString("Execution time: %1 ms").arg(topp_.timer.elapsed())); | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto 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src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem 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/usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qdialog.h:43, from /usr/include/qt5/QtWidgets/QDialog:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qdialog.h:43, from /usr/include/qt5/QtWidgets/QDialog:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/INTERFACES/IPeptideIds.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/CommonDefs.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::setBlacklistItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:72:34: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 72 | blacklist_ = bl_items.toSet(); | ~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qhash.h:46, from /usr/include/qt5/QtCore/qset.h:43, from /usr/include/qt5/QtCore/QSet:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MISC/FilterableList.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::addBlackListItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:78:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 78 | blacklist_.unite(items.toSet()); | ~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qset.h:406:30: note: declared here 406 | Q_OUTOFLINE_TEMPLATE QSet QList::toSet() const | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp: In member function 'void OpenMS::Internal::FilterableList::removeBlackListItems(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/FilterableList.cpp:85:59: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 85 | for (const auto& bl : outdated_blacklist_items.toSet()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qset.h:406:30: note: declared here 406 | Q_OUTOFLINE_TEMPLATE QSet QList::toSet() const | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp: In function 'QRectF OpenMS::GUIHelpers::getTextDimension(const QStringList&, const QFont&, int&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp:181:48: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 181 | width = std::max(width, 4 + metrics.width(text[i])); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/qwidget.h:50, from /usr/include/qt5/QtWidgets/qdialog.h:44, from /usr/include/qt5/QtWidgets/qmessagebox.h:45, from /usr/include/qt5/QtWidgets/QMessageBox:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp:43: /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/list:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/Sample.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinHit.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisPainter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/VISITORS/LayerStatistics.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/VISITORS/LayerStatistics.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ColorSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/AxisWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qtabwidget.h:43, from /usr/include/qt5/QtWidgets/QTabWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DataSelectionTabs.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIATreeTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/DIATreeTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtCore/QtCore:4, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/FilterList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp: In constructor 'OpenMS::InputFile::InputFile(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp:57:48: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 57 | completer->setModel(new QDirModel(completer)); | ^ In file included from /usr/include/qt5/QtWidgets/QDirModel:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFile.cpp:44: /usr/include/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/HistogramWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/InputFileList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qlistwidget.h:43, from /usr/include/qt5/QtWidgets/QListWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerListView.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerListView.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp: In member function 'void OpenMS::LayerDataBase::updatePeptideHitAnnotations_(OpenMS::PeptideHit&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qdatetime.h:44, from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataBase.cpp:295:42: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 295 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataChrom.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataChrom.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataConsensus.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataConsensus.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataFeature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataFeature.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataIdent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataIdent.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataIdent.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp: In member function 'void OpenMS::Internal::ListTable::createNewRow()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp:334:22: warning: 'void QListWidget::setItemSelected(const QListWidgetItem*, bool)' is deprecated: Use QListWidgetItem::setSelected() instead [-Wdeprecated-declarations] 334 | setItemSelected(item, true); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QListWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ListEditor.cpp:35: /usr/include/qt5/QtWidgets/qlistwidget.h:263:10: note: declared here 263 | void setItemSelected(const QListWidgetItem *item, bool select); | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LogWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataPeak.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/LayerDataPeak.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MultiGradient.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp: In constructor 'OpenMS::OutputDirectory::OutputDirectory(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp:56:51: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 56 | QDirModel* dir_model = new QDirModel(completer); | ^ In file included from /usr/include/qt5/QtWidgets/QDirModel:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/OutputDirectory.cpp:45: /usr/include/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:394:34: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 394 | while (index.parent().child(current_index, 0).isValid()) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/qstyleoption.h:66, from /usr/include/qt5/QtWidgets/qabstractitemdelegate.h:45, from /usr/include/qt5/QtWidgets/qitemdelegate.h:44, from /usr/include/qt5/QtWidgets/QItemDelegate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:35: /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:399:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 399 | index.parent().child(current_index, 0).data(Qt::DisplayRole).toString() == name | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:402:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 402 | (index.data(Qt::UserRole).toInt() == 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() == 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:404:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 404 | (index.data(Qt::UserRole).toInt() != 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() != 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'void OpenMS::ParamEditor::load(OpenMS::Param&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:523:29: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 523 | item->setTextColor(0, Qt::darkGray); // color of nodes with children | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:44: /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:557:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 557 | item->setTextColor(0, QColor(255, 140, 0, 255)); // orange | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:558:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 558 | item->setTextColor(2, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:559:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 559 | item->setTextColor(3, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:563:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 563 | item->setTextColor(0, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:564:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 564 | item->setTextColor(2, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/ParamEditor.cpp:565:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 565 | item->setTextColor(3, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataPeak.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Painter1DBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DWidget.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:41: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp: In member function 'void OpenMS::Plot1DCanvas::paint(QPainter*, QPaintEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:719:16: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 719 | timer.start(); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot1DCanvas.cpp:815:51: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 815 | cout << "paint event took " << timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp: In member function 'virtual void OpenMS::Plot2DCanvas::paintEvent(QPaintEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1458:26: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1458 | overall_timer.start(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40: /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1486:28: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1486 | layer_timer.start(); | ~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1530:71: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1530 | cout << " -layer " << i << " time: " << layer_timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1540:45: warning: 'QVector QRegion::rects() const' is deprecated: Use begin()/end() instead [-Wdeprecated-declarations] 1540 | QVector rects = e->region().rects(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/qmatrix.h:45, from /usr/include/qt5/QtGui/qbrush.h:49, from /usr/include/qt5/QtGui/qpen.h:45, from /usr/include/qt5/QtGui/QPen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:51: /usr/include/qt5/QtGui/qregion.h:125:20: note: declared here 125 | QVector rects() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DCanvas.cpp:1638:59: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1638 | cout << " -overall time: " << overall_timer.elapsed() << " ms" << endl << endl; | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot2DWidget.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/vector:60, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot1DWidget.h:41: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DCanvas.cpp:36: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DCanvas.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp:37: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qopenglwidget.h:43, from /usr/include/qt5/QtWidgets/QOpenGLWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DOpenGLCanvas.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DOpenGLCanvas.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/Plot3DWidget.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp:38: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/ostream:38, from /usr/include/c++/12/iostream:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/Plot3DWidget.cpp:35: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataChrom.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:39: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:36: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp: In member function 'virtual void OpenMS::PlotCanvas::wheelEvent(QWheelEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:15: warning: 'int QWheelEvent::x() const' is deprecated: Use position() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ In file included from /usr/include/qt5/QtGui/qtextlayout.h:49, from /usr/include/qt5/QtGui/qabstracttextdocumentlayout.h:45, from /usr/include/qt5/QtGui/QtGui:5, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:38: /usr/include/qt5/QtGui/qevent.h:229:16: note: declared here 229 | inline int x() const { return int(p.x()); } | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:23: warning: 'int QWheelEvent::y() const' is deprecated: Use position() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ /usr/include/qt5/QtGui/qevent.h:231:16: note: declared here 231 | inline int y() const { return int(p.y()); } | ^ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotCanvas.cpp:181:35: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 181 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~~~~~^~ /usr/include/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotWidget.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/PlotWidget.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotWidget.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/RecentFilesMenu.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SequenceVisualizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtCore/QtCore:4, from /usr/include/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/qt5/QtWidgets/QtWidgets:3, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraTreeTab.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/range/size.hpp:23, from /usr/include/boost/range/functions.hpp:20, from /usr/include/boost/range/iterator_range_core.hpp:38, from /usr/include/boost/range/iterator_range.hpp:13, from /usr/include/boost/range/adaptor/reversed.hpp:14, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/BaseFeature.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:46: /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp: In constructor 'OpenMS::SpectraTreeTab::SpectraTreeTab(QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:115:33: warning: comparison between 'enum OpenMS::ClmnPeak::HeaderNames' and 'enum OpenMS::ClmnChrom::HeaderNames' [-Wenum-compare] 115 | assert(ClmnPeak::SPEC_INDEX == ClmnChrom::CHROM_INDEX); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp: In member function 'void OpenMS::SpectraTreeTab::itemSelectionChange_(QTreeWidgetItem*, QTreeWidgetItem*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraTreeTab.cpp:190:88: warning: unused parameter 'previous' [-Wunused-parameter] 190 | void SpectraTreeTab::itemSelectionChange_(QTreeWidgetItem* current, QTreeWidgetItem* previous) | ~~~~~~~~~~~~~~~~~^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qtabwidget.h:43, from /usr/include/qt5/QtWidgets/QTabWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/DataSelectionTabs.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/SpectraIDViewTab.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::proteinCellClicked_(int, int)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:355:35: warning: comparison of integer expressions of different signedness: 'int' and 'OpenMS::Size' {aka 'long unsigned int'} [-Wsign-compare] 355 | for (int i = 0; i < aaseq.size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:324:13: warning: unused variable 'current_identification_index' [-Wunused-variable] 324 | int current_identification_index = item_pepid->data(Qt::DisplayRole).toInt(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:325:13: warning: unused variable 'current_peptide_hit_index' [-Wunused-variable] 325 | int current_peptide_hit_index = table_widget_->item(row, Clmn::PEPHIT_NR)->data(Qt::DisplayRole).toInt(); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::currentSpectraSelectionChanged_()': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:400:11: warning: unused variable 'last_spectrum_index' [-Wunused-variable] 400 | int last_spectrum_index = int(layer_->getCurrentSpectrumIndex()); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In member function 'void OpenMS::SpectraIDViewTab::updatedSingleProteinCell_(QTableWidgetItem*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:1019:70: warning: unused parameter 'item' [-Wunused-parameter] 1019 | void SpectraIDViewTab::updatedSingleProteinCell_(QTableWidgetItem* item) | ~~~~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp: In static member function 'static QString OpenMS::SpectraIDViewTab::extractNumFromAccession_(const QString&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SpectraIDViewTab.cpp:254:3: warning: control reaches end of non-void function [-Wreturn-type] 254 | } | ^ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp: In member function 'void OpenMS::TableView::hideColumns(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:197:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 197 | auto hset = header_names.toSet(); | ~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qabstractitemview.h:44, from /usr/include/qt5/QtWidgets/qtableview.h:44, from /usr/include/qt5/QtWidgets/qtablewidget.h:44, from /usr/include/qt5/QtWidgets/QTableWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TableView.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:214:162: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 214 | throw Exception::InvalidParameter(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "header_names contains a column name which is unknown: " + String(hset.toList().join(", "))); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp: In member function 'QTableWidgetItem* OpenMS::TableView::setAtBottomRow(QTableWidgetItem*, size_t, const QColor&, const QColor&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TableView.cpp:262:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 262 | item->setBackgroundColor(background); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: In member function 'virtual void OpenMS::TOPPASEdge::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:215:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 215 | int text_width=fm.width(str); | ~~~~~~~~^~~~~ In file included from /usr/include/qt5/QtGui/qpainter.h:59, from /usr/include/qt5/QtGui/QPainter:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:36: /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:235:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 235 | int text_width = fm.width(str); | ~~~~~~~~^~~~~ /usr/include/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASResource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASResources.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp: In member function 'virtual void OpenMS::TOPPASScene::contextMenuEvent(QGraphicsSceneContextMenuEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp:1854:70: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 1854 | QList supported_actions = supported_actions_set.toList(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtWidgets/qgraphicssceneevent.h:49, from /usr/include/qt5/QtWidgets/QGraphicsSceneMouseEvent:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:79, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASScene.cpp:35: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'void OpenMS::TOPPASToolVertex::getParameters_(QVector&, bool) const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:344:10: warning: 'void qSort(Container&) [with Container = QVector]' is deprecated: Use std::sort [-Wdeprecated-declarations] 344 | qSort(io_infos); | ~~~~~^~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qlist.h:43, from /usr/include/qt5/QtCore/qstringlist.h:41, from /usr/include/qt5/QtGui/qcolor.h:46, from /usr/include/qt5/QtGui/qpixmap.h:45, from /usr/include/qt5/QtGui/qpainter.h:48, from /usr/include/qt5/QtGui/QPainter:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:35: /usr/include/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'QString OpenMS::TOPPASToolVertex::toolnameWithWhitespacesForFancyWordWrapping_(QPainter*, const QString&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qhashfunctions.h:44, from /usr/include/qt5/QtCore/qlist.h:47: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:412:34: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 412 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'void OpenMS::TOPPASVertex::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*, bool)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:211:24: warning: 'void QPainterPath::addRoundRect(const QRectF&, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 211 | path.addRoundRect(boundingRect().marginsRemoved(QMarginsF(1, 1, 1, 1)), 20); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtGui/QPainterPath:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:78, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:35: /usr/include/qt5/QtGui/qpainterpath.h:152:10: note: declared here 152 | void addRoundRect(const QRectF &rect, int roundness); | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'virtual QPainterPath OpenMS::TOPPASVertex::shape() const': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:236:23: warning: 'void QPainterPath::addRoundRect(const QRectF&, int, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 236 | shape.addRoundRect(boundingRect(), 20, 20); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtGui/qpainterpath.h:147:10: note: declared here 147 | void addRoundRect(const QRectF &rect, int xRnd, int yRnd); | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: In member function 'virtual void OpenMS::TOPPASWidget::wheelEvent(QWheelEvent*)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:101:22: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 101 | zoom(event->delta() < 0); | ~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QDragEnterEvent:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:44: /usr/include/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp: In member function 'void OpenMS::TreeView::hideColumns(const QStringList&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:87:35: warning: 'QSet QList::toSet() const [with T = QString]' is deprecated: Use QSet(list.begin(), list.end()) instead. [-Wdeprecated-declarations] 87 | auto hset = header_names.toSet(); | ~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qobject.h:49, from /usr/include/qt5/QtWidgets/qwidget.h:45, from /usr/include/qt5/QtWidgets/qframe.h:44, from /usr/include/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/qt5/QtWidgets/qabstractitemview.h:44, from /usr/include/qt5/QtWidgets/qtreeview.h:44, from /usr/include/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/qt5/QtWidgets/QTreeWidget:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TreeView.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:35: /usr/include/qt5/QtCore/qlist.h:413:13: note: declared here 413 | QSet toSet() const; | ^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TreeView.cpp:101:162: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 101 | throw Exception::InvalidParameter(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "header_names contains a column name which is unknown: " + String(hset.toList().join(", "))); | ~~~~~~~~~~~^~ In file included from /usr/include/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/qt5/QtWidgets/qabstractitemview.h:46: /usr/include/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h:43, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TOPPViewMenu.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/FlagSet.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h:40: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVDIATreeTabController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVDIATreeTabController.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVSpectraViewController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVSpectraViewController.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp: In member function 'void OpenMS::TVIdentificationViewController::addPeakAnnotationsFromID_(const OpenMS::PeptideHit&)': /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qdatetime.h:44, from /usr/include/qt5/QtCore/QDate:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44: /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:1207:50: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 1207 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVIdentificationViewController.cpp:44: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:486:68: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:728:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 728 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/12/string:48: /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1138:24: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:848:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1147:26: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:572:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1210:30: required from here /builddir/build/BUILD/OpenMS-2.8make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' .0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1358:31: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:983:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1368:35: required from here /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:543:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 543 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/12/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVToolDiscovery.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/qrc_resources.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/OpenMS_GUI_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVControllerBase.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/TVControllerBase.cpp:35: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ParamValue.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:42: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX shared library ../../lib/libOpenMS_GUI.so cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libOpenMS_GUI.so -o ../../lib/libOpenMS_GUI.so CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build 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-I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -MF CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d -o CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExecutePipeline.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o -MF CMakeFiles/Resampler.dir/Resampler.cpp.o.d -o CMakeFiles/Resampler.dir/Resampler.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp:40: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/string:45, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Resampler.cpp:37: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/ExecutePipeline cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target ExecutePipeline make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/Resampler cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target Resampler make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[3]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPP make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 UTILS make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 80 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/utils/CMakeFiles/UTILS.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Automatic MOC for target OpenMS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target OpenMS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Automatic MOC for target OpenMS_GUI cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json Release make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target OpenMS_GUI_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -MF CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d -o CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AccurateMassSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -MF CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d -o CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/AssayGeneratorMetabo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/AccurateMassSearch cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target AccurateMassSearch make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target AssayGeneratorMetabo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -MF CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d -o CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTraces.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/ClusterMassTraces cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target ClusterMassTraces make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -MF CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d -o CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ClusterMassTracesByPrecursor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target ClusterMassTracesByPrecursor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o -MF CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d -o CMakeFiles/CVInspector.dir/CVInspector.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/CVInspector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/CVInspector cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target CVInspector make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -MF CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d -o CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DatabaseFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/DatabaseFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target DatabaseFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -MF CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d -o CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DeMeanderize.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Linking CXX executable ../../bin/DeMeanderize cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target DeMeanderize make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o -MF CMakeFiles/Digestor.dir/Digestor.cpp.o.d -o CMakeFiles/Digestor.dir/Digestor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Digestor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Building CXX object src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -MF CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d -o CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DecoyDatabase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/Digestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Digestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/Digestor.dir/Digestor.cpp.o -o ../../bin/Digestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target Digestor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/DecoyDatabase cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target DecoyDatabase make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -MF CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o.d -o CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/DigestorMotif.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/DigestorMotif cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target DigestorMotif make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o -MF CMakeFiles/Epifany.dir/Epifany.cpp.o.d -o CMakeFiles/Epifany.dir/Epifany.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/Epifany.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/Epifany cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target Epifany make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -MF CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d -o CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ERPairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/ERPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -o ../../bin/ERPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target ERPairFinder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -MF CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d -o CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FeatureFinderMetaboIdent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target FeatureFinderMetaboIdent make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o -MF CMakeFiles/FFEval.dir/FFEval.cpp.o.d -o CMakeFiles/FFEval.dir/FFEval.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FFEval.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Building CXX object src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -MF CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o.d -o CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/FuzzyDiff.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Linking CXX executable ../../bin/FFEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target FFEval make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/FuzzyDiff cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuzzyDiff.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o -o ../../bin/FuzzyDiff -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target FuzzyDiff make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -MF CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o.d -o CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDDecoyProbability.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Linking CXX executable ../../bin/IDDecoyProbability cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target IDDecoyProbability make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -MF CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d -o CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Building CXX object src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -MF CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d -o CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDMassAccuracy.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -MF CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d -o CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDScoreSwitcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDScoreSwitcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDScoreSwitcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDMassAccuracy cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDMassAccuracy make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -MF CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d -o CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/LabeledEval.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -MF CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d -o CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/IDSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/LabeledEval cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -o ../../bin/LabeledEval -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target LabeledEval make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/IDSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -o ../../bin/IDSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target IDSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -MF CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d -o CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MassCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MassCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -MF CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d -o CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteAdductDecharger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target MetaboliteAdductDecharger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Building CXX object src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -MF CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d -o CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaboliteSpectralMatcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MetaboliteSpectralMatcher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -MF CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d -o CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMPairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MRMPairFinder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MRMPairFinder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -MF CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d -o CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' In file included from /usr/include/c++/12/iostream:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:35: In member function 'std::basic_ostream >::operator<<(double)', inlined from 'MetaProSIP::normalizeToMax(std::map, std::allocator > > const&)' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:2477:52: /usr/include/c++/12/ostream:221:25: warning: 'best_rate' may be used uninitialized [-Wmaybe-uninitialized] 221 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp: In member function 'MetaProSIP::normalizeToMax(std::map, std::allocator > > const&)': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MetaProSIP.cpp:2472:12: note: 'best_rate' was declared here 2472 | double best_rate, best_score; | ^~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -MF CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d -o CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSFraggerAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MetaProSIP cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MetaProSIP make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Linking CXX executable ../../bin/MSFraggerAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target MSFraggerAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Building CXX object src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -MF CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o.d -o CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSSimulator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -MF CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o.d -o CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MSstatsConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MSSimulator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSSimulator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o -o ../../bin/MSSimulator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MSSimulator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MSstatsConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MSstatsConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -MF CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d -o CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MzMLSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MzMLSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MzMLSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -MF CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d -o CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MultiplexResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -MF CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d -o CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NovorAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/MultiplexResolver cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target MultiplexResolver make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Linking CXX executable ../../bin/NovorAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target NovorAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -MF CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o.d -o CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSDatabasesInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenMSDatabasesInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSDatabasesInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenMSDatabasesInfo.dir/OpenMSDatabasesInfo.cpp.o -o ../../bin/OpenMSDatabasesInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenMSDatabasesInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -MF CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d -o CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenMSInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/OpenMSInfo cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target OpenMSInfo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -MF CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d -o CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PeakPickerIterative.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PeakPickerIterative cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PeakPickerIterative make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -MF CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d -o CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/PSMFeatureExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target PSMFeatureExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Building CXX object src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -MF CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d -o CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp In member function 'NucleicAcidSearchEngine::AnnotatedHit::AnnotatedHit(NucleicAcidSearchEngine::AnnotatedHit&&)', inlined from 'std::pair::pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)' at /usr/include/c++/12/bits/stl_pair.h:535:35, inlined from 'std::make_pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)std::pair::type>::__type, std::__strip_reference_wrapper::type>::__type>' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1344:51: /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:280:10: warning: 'D.1023674.oligo_ref' may be used uninitialized [-Wmaybe-uninitialized] 280 | struct AnnotatedHit | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp: In function 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1344:72: note: '' declared here 1344 | pos = scan_hits.insert(make_pair(score, AnnotatedHit())); | ^ In member function 'NucleicAcidSearchEngine::AnnotatedHit::AnnotatedHit(NucleicAcidSearchEngine::AnnotatedHit&&)', inlined from 'std::pair::pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)' at /usr/include/c++/12/bits/stl_pair.h:535:35, inlined from 'std::make_pair(double&, NucleicAcidSearchEngine::AnnotatedHit&&)std::pair::type>::__type, std::__strip_reference_wrapper::type>::__type>' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]' at /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1337:49: /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:280:10: warning: 'D.1023681.oligo_ref' may be used uninitialized [-Wmaybe-uninitialized] 280 | struct AnnotatedHit | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp: In function 'NucleicAcidSearchEngine::main_(int, char const**) [clone ._omp_fn.0]': /builddir/build/BUILD/OpenMS-2.8.0/src/utils/NucleicAcidSearchEngine.cpp:1337:70: note: '' declared here 1337 | pos = scan_hits.insert(make_pair(score, AnnotatedHit())); | ^ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -MF CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d -o CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libboost_regex.so /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target NucleicAcidSearchEngine make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o -MF CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d -o CMakeFiles/QCExporter.dir/QCExporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExporter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -MF CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d -o CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCEmbedder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCExporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCExporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCEmbedder cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCEmbedder make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -MF CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d -o CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Building CXX object src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o -MF CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d -o CMakeFiles/QCImporter.dir/QCImporter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCImporter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCExtractor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target QCExtractor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Linking CXX executable ../../bin/QCImporter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCImporter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o -MF CMakeFiles/QCMerger.dir/QCMerger.cpp.o.d -o CMakeFiles/QCMerger.dir/QCMerger.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCMerger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/QCMerger cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCMerger make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -MF CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d -o CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/QCShrinker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/QCShrinker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target QCShrinker make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -MF CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d -o CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNADigestor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/RNADigestor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target RNADigestor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -MF CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d -o CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNAMassCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Linking CXX executable ../../bin/RNAMassCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target RNAMassCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -MF CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d -o CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlXICFilter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RNPxlXICFilter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target RNPxlXICFilter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Building CXX object src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -MF CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d -o CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ProteomicsLFQ.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/ProteomicsLFQ cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target ProteomicsLFQ make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -MF CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d -o CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RTEvaluation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RTEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target RTEvaluation make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -MF CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d -o CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/RNPxlSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Building CXX object src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -MF CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d -o CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SemanticValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SemanticValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SemanticValidator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Linking CXX executable ../../bin/RNPxlSearch cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target RNPxlSearch make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -MF CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d -o CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SequenceCoverageCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SequenceCoverageCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -MF CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d -o CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SimpleSearchEngine.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SimpleSearchEngine cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SimpleSearchEngine make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -MF CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d -o CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpecLibCreator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpecLibCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpecLibCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -MF CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d -o CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SiriusAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SiriusAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SiriusAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -MF CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o.d -o CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SpectraSTSearchAdapter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SpectraSTSearchAdapter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraSTSearchAdapter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o -o ../../bin/SpectraSTSearchAdapter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SpectraSTSearchAdapter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o -MF CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d -o CMakeFiles/StaticModification.dir/StaticModification.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/StaticModification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/StaticModification cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target StaticModification make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -MF CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d -o CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TICCalculator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target SvmTheoreticalSpectrumGeneratorTrainer make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TICCalculator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TICCalculator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TriqlerConverter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -MF CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d -o CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TransformationEvaluation cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TransformationEvaluation make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -MF CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o.d -o CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TriqlerConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TriqlerConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TriqlerConverter.dir/TriqlerConverter.cpp.o -o ../../bin/TriqlerConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TriqlerConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -MF CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d -o CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/XMLValidator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target XMLValidator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -MF CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d -o CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TargetedFileConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/TargetedFileConverter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -o ../../bin/TargetedFileConverter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target TargetedFileConverter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -MF CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d -o CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathMzMLFileCacher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -MF CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d -o CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathDIAPreScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathMzMLFileCacher make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathDIAPreScoring make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -MF CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d -o CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathFileSplitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathFileSplitter make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Building CXX object src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathWorkflow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -MF CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d -o CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/OpenSwathRewriteToFeatureXML.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathRewriteToFeatureXML make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathWorkflow make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake --color= Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DVerticalLineItem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ListFilterDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DGoToDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot1DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DGoToDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot2DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Plot3DPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIATreeTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DataSelectionTabs.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/INTERFACES/IPeptideIds.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataChrom.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataConsensus.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataFeature.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataIdent.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerDataPeak.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerListView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LogWindow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/CommonDefs.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/FilterableList.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Painter1DBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot1DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot2DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DOpenGLCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Plot3DWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotCanvas.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/PlotWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/RecentFilesMenu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SequenceVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIDViewTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraTreeTab.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewMenu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVControllerBase.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVDIATreeTabController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVIdentificationViewController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVSpectraViewController.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TVToolDiscovery.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TableView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TreeView.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISITORS/LayerStatistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[3]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -MF CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d -o CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/INIUpdater.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/INIUpdater cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target INIUpdater make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Building CXX object src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SQL_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/MRMTransitionGroupPicker.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target MRMTransitionGroupPicker make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -MF CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d -o CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/utils/ImageCreator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/ImageCreator cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCreator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -o ../../bin/ImageCreator -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target ImageCreator make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[3]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target UTILS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 GUI make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 71 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/openms_gui/CMakeFiles/GUI.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Automatic MOC for target OpenMS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target OpenMS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Automatic MOC for target OpenMS_GUI cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json Release make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target OpenMS_GUI_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[3]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenMS_GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TOPPView_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target INIFileEditor_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Automatic MOC for target SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp" AutoMoc: Generating MOC compilation "SRC:/build/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TOPPAS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SwathWizard_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/INIFileEditor_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -MF CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d -o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Linking CXX executable ../../bin/INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target INIFileEditor make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/SwathWizard_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -MF CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d -o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target SwathWizard make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPView_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -MF CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d -o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp In file included from /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/MSExperiment.h:39, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h:42, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h:44, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:48, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp:55: /builddir/build/BUILD/OpenMS-2.8.0/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, from /usr/include/c++/12/algorithm:60, from /usr/include/qt5/QtCore/qglobal.h:142, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qsplashscreen.h:43, from /usr/include/qt5/QtWidgets/QSplashScreen:1, from /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp:51: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/TOPPAS_autogen/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /builddir/build/BUILD/OpenMS-2.8.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtSql -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWebEngineWidgets -isystem /usr/include/qt5/QtWebEngineCore -isystem /usr/include/qt5/QtQuick -isystem /usr/include/qt5/QtQmlModels -isystem /usr/include/qt5/QtQml -isystem /usr/include/qt5/QtWebChannel -isystem /usr/include/qt5/QtPositioning -isystem /usr/include/qt5/QtPrintSupport -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -MF CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d -o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -c /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPPView make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Linking CXX executable ../../bin/TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-cpp -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS -Wl,-rpath,/builddir/build/BUILD/OpenMS-2.8.0/build/lib: ../../lib/libOpenMS_GUI.so ../../lib/libOpenMS.so ../../lib/libOpenSwathAlgo.so /usr/lib64/libsvm.so /usr/lib64/libxerces-c.so /usr/lib64/libQt5Sql.so.5.15.7 /usr/lib/gcc/x86_64-redhat-linux/12/libgomp.so /usr/lib64/libpthread.a /usr/lib64/libQt5Svg.so.5.15.7 /usr/lib64/libQt5WebEngineWidgets.so.5.15.10 /usr/lib64/libQt5WebEngineCore.so.5.15.10 /usr/lib64/libQt5WebChannel.so.5.15.7 /usr/lib64/libQt5Positioning.so.5.15.7 /usr/lib64/libQt5Quick.so.5.15.7 /usr/lib64/libQt5QmlModels.so.5.15.7 /usr/lib64/libQt5Qml.so.5.15.7 /usr/lib64/libQt5Network.so.5.15.7 /usr/lib64/libQt5PrintSupport.so.5.15.7 /usr/lib64/libQt5Widgets.so.5.15.7 /usr/lib64/libQt5Gui.so.5.15.7 /usr/lib64/libQt5Core.so.5.15.7 make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPPAS make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/GUI.dir/DependInfo.cmake --color= make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/build make[3]: Nothing to be done for 'src/openms_gui/CMakeFiles/GUI.dir/build'. make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target GUI make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.YQD1oc + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 ++ dirname /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + export LD_LIBRARY_PATH=/builddir/build/BUILD/OpenMS-2.8.0/lib: + LD_LIBRARY_PATH=/builddir/build/BUILD/OpenMS-2.8.0/lib: + /usr/bin/xvfb-run -a /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-2.8.0 -B/builddir/build/BUILD/OpenMS-2.8.0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles /builddir/build/BUILD/OpenMS-2.8.0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-2.8.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenSwathAlgo /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Automatic MOC for target OpenMS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 0%] Built target OpenMS_autogen /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 56%] Built target OpenMS /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 56%] Automatic MOC for target OpenMS_GUI cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 56%] Built target OpenMS_GUI_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target OpenMS_GUI /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Automatic MOC for target INIFileEditor cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target INIFileEditor_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target INIFileEditor /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Automatic MOC for target SwathWizard cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 69%] Built target SwathWizard_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target SwathWizard /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Automatic MOC for target TOPPAS cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPAS_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPAS /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Automatic MOC for target TOPPView cd /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 70%] Built target TOPPView_autogen /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui /builddir/build/BUILD/OpenMS-2.8.0/build/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target TOPPView /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 71%] Built target BaselineFilter /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CometAdapter /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CompNovo /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CompNovoCID /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target ConsensusID /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target ConsensusMapNormalizer /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target CruxAdapter /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target DatabaseSuitability /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 72%] Built target Decharger /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target DTAExtractor /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 73%] Built target EICExtractor /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target ExternalCalibration /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FalseDiscoveryRate /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderCentroided /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderIdentification /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderIsotopeWavelet /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 74%] Built target FeatureFinderMetabo /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureFinderMRM /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureFinderMultiplex /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerLabeled /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerUnlabeled /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 75%] Built target FeatureLinkerUnlabeledKD /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FeatureLinkerUnlabeledQT /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FidoAdapter /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileConverter /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileFilter /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileInfo /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target FileMerger /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target GenericWrapper /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target GNPSExport /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target HighResPrecursorMassCorrector /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDConflictResolver /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDFileConverter /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDFilter /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDMapper /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDMerger /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDPosteriorErrorProbability /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 76%] Built target IDRipper /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target IDRTCalibration /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target InclusionExclusionListCreator /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target InternalCalibration /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target IsobaricAnalyzer /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target LuciphorAdapter /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerIdentification /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerPoseClustering /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerSpectrum /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 77%] Built target MapAlignerTreeGuided /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapNormalizer /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapRTTransformer /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MapStatistics /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MaRaClusterAdapter /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MascotAdapter /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MascotAdapterOnline /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 78%] Built target MassTraceExtractor /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MRMMapper /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MSGFPlusAdapter /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 79%] Built target MyriMatchAdapter /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target MzTabExporter /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target NoiseFilterGaussian /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target NoiseFilterSGolay /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target OMSSAAdapter /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 80%] Built target OpenPepXL /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenPepXLLF /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 81%] Built target OpenSwathAnalyzer /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathAssayGenerator /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathChromatogramExtractor /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathConfidenceScoring /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathDecoyGenerator /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathFeatureXMLToTSV /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target OpenSwathRTNormalizer /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeakPickerHiRes /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeakPickerWavelet /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PepNovoAdapter /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 82%] Built target PeptideIndexer /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PercolatorAdapter /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PhosphoScoring /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PrecursorIonSelector /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target PrecursorMassCorrector /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target ProteinInference /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 83%] Built target ProteinQuantifier /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 84%] Built target ProteinResolver /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target PTModel /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target PTPredict /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target QualityControl /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target RTModel /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target RTPredict /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SeedListGenerator /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SpecLibSearcher /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 85%] Built target SpectraFilterBernNorm /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterMarkerMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterNLargest /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterNormalizer /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterParentPeakMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterScaler /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 86%] Built target SpectraFilterSqrtMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraFilterThresholdMower /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraFilterWindowMower /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target SpectraMerger /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target TextExporter /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 87%] Built target TOFCalibration /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target XFDR /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target XTandemAdapter /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ExecutePipeline /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target Resampler /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target AccurateMassSearch /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target AssayGeneratorMetabo /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ClusterMassTraces /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target ClusterMassTracesByPrecursor /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target CVInspector /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DatabaseFilter /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DecoyDatabase /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 88%] Built target DeMeanderize /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target Digestor /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target DigestorMotif /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target Epifany /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target ERPairFinder /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target FeatureFinderMetaboIdent /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 89%] Built target FFEval /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Built target FuzzyDiff /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 90%] Built target IDDecoyProbability /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDExtractor /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDMassAccuracy /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDScoreSwitcher /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target IDSplitter /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target LabeledEval /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MassCalculator /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MetaboliteAdductDecharger /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 91%] Built target MetaboliteSpectralMatcher /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MetaProSIP /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MRMPairFinder /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MSFraggerAdapter /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 92%] Built target MSSimulator /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MSstatsConverter /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MultiplexResolver /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target MzMLSplitter /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target NovorAdapter /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 93%] Built target NucleicAcidSearchEngine /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build.make src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSDatabasesInfo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target OpenMSDatabasesInfo /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target OpenMSInfo /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target PeakPickerIterative /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target PSMFeatureExtractor /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCCalculator /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCEmbedder /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCExporter /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCExtractor /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 94%] Built target QCImporter /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target QCMerger /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target QCShrinker /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target ProteomicsLFQ /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target RNADigestor /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 95%] Built target RNAMassCalculator /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RNPxlXICFilter /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RNPxlSearch /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 96%] Built target RTEvaluation /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SemanticValidator /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SequenceCoverageCalculator /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SimpleSearchEngine /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SiriusAdapter /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SpecLibCreator /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SpectraSTSearchAdapter /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target StaticModification /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target SvmTheoreticalSpectrumGeneratorTrainer /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TICCalculator /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TransformationEvaluation /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TriqlerConverter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TriqlerConverter.dir/build.make src/utils/CMakeFiles/TriqlerConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/TriqlerConverter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TriqlerConverter /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target XMLValidator /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target TargetedFileConverter /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathDIAPreScoring /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathMzMLFileCacher /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 97%] Built target OpenSwathWorkflow /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenSwathFileSplitter /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target OpenSwathRewriteToFeatureXML /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target MRMTransitionGroupPicker /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [ 98%] Built target ImageCreator /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target INIUpdater /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils /builddir/build/BUILD/OpenMS-2.8.0/build/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target UTILS /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp /builddir/build/BUILD/OpenMS-2.8.0/build/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[2]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target TOPP /usr/bin/make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' cd /builddir/build/BUILD/OpenMS-2.8.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-2.8.0 /builddir/build/BUILD/OpenMS-2.8.0/doc /builddir/build/BUILD/OpenMS-2.8.0/build /builddir/build/BUILD/OpenMS-2.8.0/build/doc /builddir/build/BUILD/OpenMS-2.8.0/build/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[2]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Build the doxygen documentation cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E remove_directory html cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E chdir /builddir/build/BUILD/OpenMS-2.8.0/build/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1141 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1569 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1871 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1961 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2066 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2254 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2296 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2303 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2527 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.5 Searching for include files... Searching for example files... 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/builddir/build/BUILD/OpenMS-2.8.0/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_advanced.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_advanced.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_concepts.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_concepts.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_scripting.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPP_scripting.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPAS.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPAS.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPView_interface.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/TOPP_tutorial/TOPPView_interface.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Changelog.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Changelog.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/ExternalCode.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/ExternalCode.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/FAQ.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/FAQ.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/KnownDevBugs.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/KnownDevBugs.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Main.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Main.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Modules.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/Modules.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/PyOpenMS.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/PyOpenMS.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/QuickStart.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/QuickStart.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPP.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPP.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPPAS.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/TOPPAS.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/UTILS.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/public/UTILS.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/install/common-cmake-parameters.doxygen... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/install/common-cmake-parameters.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/install/install-linux-bin.doxygen... 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Parsing file /builddir/build/BUILD/OpenMS-2.8.0/doc/doxygen/install/install-win.doxygen... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/BaselineFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CometAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CompNovoCID.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusID.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/CruxAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DatabaseSuitability.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/Decharger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/DTAExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/EICExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExecutePipeline.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExecutePipeline.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/ExternalCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FalseDiscoveryRate.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderCentroided.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIdentification.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMetabo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMRM.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerBase.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerBase.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FidoAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileInfo.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/FileMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GenericWrapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/GNPSExport.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDConflictResolver.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFileConverter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDFilter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDMerger.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRipper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IDRTCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/InternalCalibration.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/IsobaricAnalyzer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/LuciphorAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerIdentification.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerSpectrum.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapRTTransformer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MapStatistics.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MaRaClusterAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MascotAdapterOnline.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MassTraceExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MRMMapper.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MSGFPlusAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MyriMatchAdapter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/MzTabExporter.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterGaussian.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/NoiseFilterSGolay.cpp... 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Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/topp/PeakPickerHiRes.cpp... 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Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TransformationEvaluation.cpp... Preprocessing /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/TriqlerConverter.cpp... Preprocessi kpathsea: Running mktexfmt latex.fmt mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order): mktexfmt: /usr/share/texlive/texmf-dist/web2c/fmtutil.cnf mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes: mktexfmt: /builddir/.texlive2021/texmf-config/web2c/fmtutil.cnf mktexfmt [INFO]: writing formats under /builddir/.texlive2021/texmf-var/web2c mktexfmt [INFO]: --- remaking latex with pdftex mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ... This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (INITEX) restricted \write18 enabled. (/usr/share/texlive/texmf-dist/web2c/cp227.tcx) entering extended mode (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/latex.ini (/usr/share/texlive/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex) (/usr/share/texlive/texmf-dist/tex/latex/base/latex.ltx (/usr/share/texlive/texmf-dist/tex/latex/base/texsys.cfg) ./texsys.aux found \@currdir set to: ./. Assuming \openin and \input have the same search path. 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Transcript written on latex.log. mktexfmt [INFO]: log file copied to: /builddir/.texlive2021/texmf-var/web2c/pdftex/latex.log mktexfmt [INFO]: /builddir/.texlive2021/texmf-var/web2c/pdftex/latex.fmt installed. mktexfmt [INFO]: successfully rebuilt formats: 1 mktexfmt [INFO]: not selected formats: 19 mktexfmt [INFO]: total formats: 20 mktexfmt [INFO]: exiting with status 0 ng /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp... Parsing file /builddir/build/BUILD/OpenMS-2.8.0/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Parsing code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... Parsing code for file GenericWrapper.cpp... Parsing code for file GNPSExport.cpp... Parsing code for file HighResPrecursorMassCorrector.cpp... Parsing code for file IDConflictResolver.cpp... Parsing code for file IDFileConverter.cpp... Parsing code for file IDFilter.cpp... Parsing code for file IDMapper.cpp... Parsing code for file IDMerger.cpp... Parsing code for file IDPosteriorErrorProbability.cpp... Parsing code for file IDRipper.cpp... Parsing code for file IDRTCalibration.cpp... Parsing code for file InclusionExclusionListCreator.cpp... Parsing code for file InternalCalibration.cpp... Parsing code for file IsobaricAnalyzer.cpp... Parsing code for file LuciphorAdapter.cpp... Parsing code for file MapAlignerIdentification.cpp... Parsing code for file MapAlignerPoseClustering.cpp... Parsing code for file MapAlignerSpectrum.cpp... Parsing code for file MapAlignerTreeGuided.cpp... Parsing code for file MapNormalizer.cpp... Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... Parsing code for file OpenSwathRTNormalizer.cpp... Parsing code for file PeakPickerHiRes.cpp... Parsing code for file PeakPickerWavelet.cpp... Parsing code for file PepNovoAdapter.cpp... Parsing code for file PeptideIndexer.cpp... Parsing code for file PercolatorAdapter.cpp... Parsing code for file PhosphoScoring.cpp... Parsing code for file PrecursorIonSelector.cpp... Parsing code for file PrecursorMassCorrector.cpp... Parsing code for file ProteinInference.cpp... Parsing code for file ProteinQuantifier.cpp... Parsing code for file ProteinResolver.cpp... Parsing code for file PTModel.cpp... Parsing code for file PTPredict.cpp... Parsing code for file QualityControl.cpp... Parsing code for file Resampler.cpp... Parsing code for file RTModel.cpp... Parsing code for file RTPredict.cpp... Parsing code for file SeedListGenerator.cpp... Parsing code for file SpecLibSearcher.cpp... Parsing code for file SpectraFilterBernNorm.cpp... Parsing code for file SpectraFilterMarkerMower.cpp... Parsing code for file SpectraFilterNLargest.cpp... Parsing code for file SpectraFilterNormalizer.cpp... Parsing code for file SpectraFilterParentPeakMower.cpp... Parsing code for file SpectraFilterScaler.cpp... Parsing code for file SpectraFilterSqrtMower.cpp... Parsing code for file SpectraFilterThresholdMower.cpp... Parsing code for file SpectraFilterWindowMower.cpp... Parsing code for file SpectraMerger.cpp... Parsing code for file TextExporter.cpp... Parsing code for file TOFCalibration.cpp... Parsing code for file XFDR.cpp... Parsing code for file XTandemAdapter.cpp... Parsing code for file AccurateMassSearch.cpp... Parsing code for file AssayGeneratorMetabo.cpp... Parsing code for file ClusterMassTraces.cpp... Parsing code for file ClusterMassTracesByPrecursor.cpp... Parsing code for file CVInspector.cpp... Parsing code for file DatabaseFilter.cpp... Parsing code for file DecoyDatabase.cpp... Parsing code for file DeMeanderize.cpp... Parsing code for file Digestor.cpp... Parsing code for file DigestorMotif.cpp... Parsing code for file Epifany.cpp... Parsing code for file ERPairFinder.cpp... Parsing code for file FeatureFinderMetaboIdent.cpp... Parsing code for file FFEval.cpp... Parsing code for file FuzzyDiff.cpp... Parsing code for file IDDecoyProbability.cpp... Parsing code for file IDExtractor.cpp... Parsing code for file IDMassAccuracy.cpp... Parsing code for file IDScoreSwitcher.cpp... Parsing code for file IDSplitter.cpp... Parsing code for file ImageCreator.cpp... Parsing code for file INIUpdater.cpp... Parsing code for file LabeledEval.cpp... Parsing code for file MassCalculator.cpp... Parsing code for file MetaboliteAdductDecharger.cpp... Parsing code for file MetaboliteSpectralMatcher.cpp... Parsing code for file MetaProSIP.cpp... Parsing code for file MRMPairFinder.cpp... Parsing code for file MRMTransitionGroupPicker.cpp... Parsing code for file MSFraggerAdapter.cpp... Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSDatabasesInfo.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... Parsing code for file RNADigestor.cpp... Parsing code for file RNAMassCalculator.cpp... Parsing code for file RNPxlSearch.cpp... Parsing code for file RNPxlXICFilter.cpp... Parsing code for file RTEvaluation.cpp... Parsing code for file SemanticValidator.cpp... Parsing code for file SequenceCoverageCalculator.cpp... Parsing code for file SimpleSearchEngine.cpp... Parsing code for file SiriusAdapter.cpp... Parsing code for file SpecLibCreator.cpp... Parsing code for file SpectraSTSearchAdapter.cpp... Parsing code for file StaticModification.cpp... Parsing code for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing code for file TargetedFileConverter.cpp... Parsing code for file TICCalculator.cpp... Parsing code for file TransformationEvaluation.cpp... Parsing code for file TriqlerConverter.cpp... Parsing code for file XMLValidator.cpp... Generating file documentation... Generating docs for file common-cmake-parameters.doxygen... Generating docs for file install-linux-bin.doxygen... Generating docs for file install-linux.doxygen... Generating docs for file install-macs-bin.doxygen... Generating docs for file install-macs.doxygen... Generating docs for file install-win-bin.doxygen... Generating docs for file install-win.doxygen... Generating docs for file Changelog.doxygen... Generating docs for file ExternalCode.doxygen... Generating docs for file FAQ.doxygen... Generating docs for file KnownDevBugs.doxygen... Generating docs for file Main.doxygen... Generating docs for file Modules.doxygen... Generating docs for file OpenMS_Tutorial_html.doxygen... Generating docs for file PyOpenMS.doxygen... Generating docs for file QuickStart.doxygen... Generating docs for file TOPP.doxygen... Generating docs for file TOPP_Tutorial_html.doxygen... Generating docs for file UTILS.doxygen... Generating docs for file OpenMS_Tutorial.doxygen... Generating docs for file TOPP_advanced.doxygen... Generating docs for file TOPP_concepts.doxygen... Generating docs for file TOPP_scripting.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPView_calling_topp.doxygen... Generating docs for file TOPPView_interface.doxygen... Generating docs for file INIFileEditor.cpp... Generating docs for file SwathWizard.cpp... Generating docs for file TOPPAS.cpp... Generating docs for file TOPPView.cpp... Generating docs for file INIFileEditorWindow.cpp... Generating docs for file QApplicationTOPP.cpp... Generating docs for file SwathWizardBase.cpp... Generating docs for file TOPPASBase.cpp... Generating docs for file TOPPViewBase.cpp... Generating docs for file BaselineFilter.cpp... Generating docs for file CometAdapter.cpp... Generating docs for file CompNovo.cpp... Generating docs for file CompNovoCID.cpp... Generating docs for file ConsensusID.cpp... Generating docs for file ConsensusMapNormalizer.cpp... Generating docs for file CruxAdapter.cpp... Generating docs for file DatabaseSuitability.cpp... Generating docs for file Decharger.cpp... Generating docs for file DTAExtractor.cpp... Generating docs for file EICExtractor.cpp... Generating docs for file ExecutePipeline.cpp... Generating docs for file ExternalCalibration.cpp... Generating docs for file FalseDiscoveryRate.cpp... Generating docs for file FeatureFinderCentroided.cpp... Generating docs for file FeatureFinderIdentification.cpp... Generating docs for file FeatureFinderIsotopeWavelet.cpp... Generating docs for file FeatureFinderMetabo.cpp... Generating docs for file FeatureFinderMRM.cpp... Generating docs for file FeatureFinderMultiplex.cpp... Generating docs for file FeatureLinkerBase.cpp... Generating docs for file FeatureLinkerLabeled.cpp... Generating docs for file FeatureLinkerUnlabeled.cpp... Generating docs for file FeatureLinkerUnlabeledKD.cpp... Generating docs for file FeatureLinkerUnlabeledQT.cpp... Generating docs for file FidoAdapter.cpp... Generating docs for file FileConverter.cpp... Generating docs for file FileFilter.cpp... Generating docs for file FileInfo.cpp... Generating docs for file FileMerger.cpp... Generating docs for file GenericWrapper.cpp... Generating docs for file GNPSExport.cpp... Generating docs for file HighResPrecursorMassCorrector.cpp... Generating docs for file IDConflictResolver.cpp... Generating docs for file IDFileConverter.cpp... Generating docs for file IDFilter.cpp... Generating docs for file IDMapper.cpp... Generating docs for file IDMerger.cpp... Generating docs for file IDPosteriorErrorProbability.cpp... Generating docs for file IDRipper.cpp... Generating docs for file IDRTCalibration.cpp... Generating docs for file InclusionExclusionListCreator.cpp... Generating docs for file InternalCalibration.cpp... Generating docs for file IsobaricAnalyzer.cpp... Generating docs for file LuciphorAdapter.cpp... Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... Generating docs for file OpenSwathAnalyzer.cpp... Generating docs for file OpenSwathAssayGenerator.cpp... Generating docs for file OpenSwathChromatogramExtractor.cpp... Generating docs for file OpenSwathConfidenceScoring.cpp... Generating docs for file OpenSwathDecoyGenerator.cpp... Generating docs for file OpenSwathFeatureXMLToTSV.cpp... Generating docs for file OpenSwathRTNormalizer.cpp... Generating docs for file PeakPickerHiRes.cpp... Generating docs for file PeakPickerWavelet.cpp... Generating docs for file PepNovoAdapter.cpp... Generating docs for file PeptideIndexer.cpp... Generating docs for file PercolatorAdapter.cpp... Generating docs for file PhosphoScoring.cpp... Generating docs for file PrecursorIonSelector.cpp... Generating docs for file PrecursorMassCorrector.cpp... Generating docs for file ProteinInference.cpp... Generating docs for file ProteinQuantifier.cpp... Generating docs for file ProteinResolver.cpp... Generating docs for file PTModel.cpp... Generating docs for file PTPredict.cpp... Generating docs for file QualityControl.cpp... Generating docs for file Resampler.cpp... Generating docs for file RTModel.cpp... Generating docs for file RTPredict.cpp... Generating docs for file SeedListGenerator.cpp... Generating docs for file SpecLibSearcher.cpp... Generating docs for file SpectraFilterBernNorm.cpp... Generating docs for file SpectraFilterMarkerMower.cpp... Generating docs for file SpectraFilterNLargest.cpp... Generating docs for file SpectraFilterNormalizer.cpp... Generating docs for file SpectraFilterParentPeakMower.cpp... Generating docs for file SpectraFilterScaler.cpp... Generating docs for file SpectraFilterSqrtMower.cpp... Generating docs for file SpectraFilterThresholdMower.cpp... Generating docs for file SpectraFilterWindowMower.cpp... Generating docs for file SpectraMerger.cpp... Generating docs for file TextExporter.cpp... Generating docs for file TOFCalibration.cpp... Generating docs for file XFDR.cpp... Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorWarning: Orthogonal edges do not currently handle edge labels. Try using xlabels. Warning: Orthogonal edges do not currently handle edge labels. Try using xlabels. Adapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSDatabasesInfo.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... Generating docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file TriqlerConverter.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... Generating docs for page TOPP_example_featuredetection... Generating docs for page TOPP_example_featuregrouping... Generating docs for page TOPP_example_calibration... Generating docs for page TOPP_example_ppp... Generating docs for page TOPP_example_convert... Generating docs for page TOPPAS_general... Generating docs for page TOPPAS_interface... Generating docs for page TOPPAS_examples... Generating docs for page TOPPView_baseline_reduction... Generating docs for page TOPPView_smoothing... Generating docs for page TOPPView_peakpicking... Generating docs for page TOPPView_feature_detection_centroided... Generating docs for page TOPPView_introduction... Generating docs for page TOPPView_views... Generating docs for page TOPPView_modes... Generating docs for page TOPPView_analysis... Generating docs for page TOPPView_editing... Generating docs for page TOPPView_hotkeys... Generating docs for page ChangeLog... Generating docs for page external_code... Generating docs for page FAQ... Generating docs for page known_dev_bugs... Generating docs for page OpenMS_tutorial... Generating docs for page pyOpenMS... Generating docs for page Quickstart... Generating docs for page TOPP_documentation... Generating docs for page TOPP_tutorial... Generating docs for page TOPPAS_tutorial... Generating docs for page UTILS_documentation... Generating docs for page install_linux_bin... Generating docs for page install_linux... Generating docs for page install_mac_bin... Generating docs for page install_mac... Generating docs for page install_win_bin... Generating docs for page install_win... Generating docs for page TOPP_INIFileEditor... Generating docs for page TOPP_SwathWizard... Generating docs for page TOPP_TOPPAS... Generating docs for page TOPP_TOPPView... Generating docs for page TOPP_BaselineFilter... Generating docs for page TOPP_CometAdapter... Generating docs for page TOPP_CompNovo... Generating docs for page TOPP_CompNovoCID... Generating docs for page TOPP_ConsensusID... Generating docs for page TOPP_ConsensusMapNormalizer... Generating docs for page TOPP_CruxAdapter... Generating docs for page TOPP_DatabaseSuitability... Generating docs for page TOPP_Decharger... Generating docs for page TOPP_DTAExtractor... Generating docs for page TOPP_EICExtractor... Generating docs for page TOPP_ExecutePipeline... Generating docs for page TOPP_ExternalCalibration... Generating docs for page TOPP_FalseDiscoveryRate... Generating docs for page TOPP_FeatureFinderCentroided... Generating docs for page TOPP_FeatureFinderIdentification... Generating docs for page TOPP_FeatureFinderIsotopeWavelet... Generating docs for page TOPP_FeatureFinderMetabo... Generating docs for page TOPP_FeatureFinderMRM... Generating docs for page TOPP_FeatureFinderMultiplex... Generating docs for page TOPP_FeatureLinkerBase... Generating docs for page TOPP_FeatureLinkerLabeled... Generating docs for page TOPP_FeatureLinkerUnlabeled... Generating docs for page TOPP_FeatureLinkerUnlabeledKD... Generating docs for page TOPP_FeatureLinkerUnlabeledQT... Generating docs for page TOPP_FidoAdapter... Generating docs for page TOPP_FileConverter... Generating docs for page TOPP_FileFilter... Generating docs for page TOPP_FileInfo... Generating docs for page TOPP_FileMerger... Generating docs for page TOPP_GenericWrapper... Generating docs for page TOPP_GNPSExport... Generating docs for page TOPP_HighResPrecursorMassCorrector... Generating docs for page TOPP_IDConflictResolver... Generating docs for page TOPP_IDFileConverter... Generating docs for page TOPP_IDFilter... Generating docs for page TOPP_IDMapper... Generating docs for page TOPP_IDMerger... Generating docs for page TOPP_IDPosteriorErrorProbability... Generating docs for page TOPP_IDRipper... Generating docs for page TOPP_IDRTCalibration... Generating docs for page TOPP_InclusionExclusionListCreator... Generating docs for page TOPP_InternalCalibration... Generating docs for page TOPP_IsobaricAnalyzer... Generating docs for page TOPP_LuciphorAdapter... Generating docs for page TOPP_MapAlignerIdentification... Generating docs for page TOPP_MapAlignerPoseClustering... Generating docs for page TOPP_MapAlignerSpectrum... Generating docs for page TOPP_MapAlignerTreeGuided... Generating docs for page TOPP_MapNormalizer... Generating docs for page TOPP_MapRTTransformer... Generating docs for page TOPP_MapStatistics... Generating docs for page TOPP_MaRaClusterAdapter... Generating docs for page TOPP_MascotAdapter... Generating docs for page TOPP_MascotAdapterOnline... Generating docs for page TOPP_MassTraceExtractor... Generating docs for page TOPP_MRMMapper... Generating docs for page TOPP_MSGFPlusAdapter... Generating docs for page TOPP_MyriMatchAdapter... Generating docs for page TOPP_MzTabExporter... Generating docs for page TOPP_NoiseFilterGaussian... Generating docs for page TOPP_NoiseFilterSGolay... Generating docs for page TOPP_OMSSAAdapter... Generating docs for page TOPP_OpenPepXL... Generating docs for page TOPP_OpenPepXLLF... Generating docs for page TOPP_OpenSwathAnalyzer... Generating docs for page TOPP_OpenSwathAssayGenerator... Generating docs for page TOPP_OpenSwathChromatogramExtractor... Generating docs for page TOPP_OpenSwathConfidenceScoring... Generating docs for page TOPP_OpenSwathDecoyGenerator... Generating docs for page TOPP_OpenSwathFeatureXMLToTSV... Generating docs for page TOPP_OpenSwathRTNormalizer... Generating docs for page TOPP_PeakPickerHiRes... Generating docs for page TOPP_PeakPickerWavelet... Generating docs for page TOPP_PepNovoAdapter... Generating docs for page TOPP_PeptideIndexer... Generating docs for page TOPP_PercolatorAdapter... Generating docs for page TOPP_PhosphoScoring... Generating docs for page TOPP_PrecursorIonSelector... Generating docs for page TOPP_PrecursorMassCorrector... Generating docs for page TOPP_ProteinInference... Generating docs for page TOPP_ProteinQuantifier... Generating docs for page TOPP_ProteinResolver... Generating docs for page TOPP_PTModel... Generating docs for page TOPP_PTPredict... Generating docs for page TOPP_QualityControl... Generating docs for page TOPP_Resampler... Generating docs for page TOPP_RTModel... Generating docs for page TOPP_RTPredict... Generating docs for page TOPP_SeedListGenerator... Generating docs for page TOPP_SpecLibSearcher... Generating docs for page TOPP_SpectraFilterBernNorm... Generating docs for page TOPP_SpectraFilterMarkerMower... Generating docs for page TOPP_SpectraFilterNLargest... Generating docs for page TOPP_SpectraFilterNormalizer... Generating docs for page TOPP_SpectraFilterParentPeakMower... Generating docs for page TOPP_SpectraFilterScaler... Generating docs for page TOPP_SpectraFilterSqrtMower... Generating docs for page TOPP_SpectraFilterThresholdMower... Generating docs for page TOPP_SpectraFilterWindowMower... Generating docs for page TOPP_SpectraMerger... Generating docs for page TOPP_TextExporter... Generating docs for page TOPP_TOFCalibration... Generating docs for page TOPP_XFDR... Generating docs for page TOPP_XTandemAdapter... Generating docs for page UTILS_AccurateMassSearch... Generating docs for page UTILS_AssayGeneratorMetabo... Generating docs for page UTILS_ClusterMassTraces... Generating docs for page UTILS_ClusterMassTracesByPrecursor... Generating docs for page UTILS_CVInspector... Generating docs for page UTILS_DatabaseFilter... Generating docs for page UTILS_DecoyDatabase... Generating docs for page UTILS_DeMeanderize... Generating docs for page UTILS_Digestor... Generating docs for page UTILS_DigestorMotif... Generating docs for page UTILS_Epifany... Generating docs for page UTILS_ERPairFinder... Generating docs for page UTILS_FeatureFinderMetaboIdent... Generating docs for page UTILS_FFEval... Generating docs for page UTILS_FuzzyDiff... Generating docs for page UTILS_IDDecoyProbability... Generating docs for page UTILS_IDExtractor... Generating docs for page UTILS_IDMassAccuracy... Generating docs for page UTILS_IDScoreSwitcher... Generating docs for page UTILS_IDSplitter... Generating docs for page UTILS_ImageCreator... Generating docs for page UTILS_INIUpdater... Generating docs for page UTILS_LabeledEval... Generating docs for page UTILS_MassCalculator... Generating docs for page UTILS_MetaboliteAdductDecharger... Generating docs for page UTILS_MetaboliteSpectralMatcher... Generating docs for page UTILS_MetaProSIP... Generating docs for page UTILS_MRMPairFinder... Generating docs for page UTILS_MRMTransitionGroupPicker... Generating docs for page UTILS_MSFraggerAdapter... Generating docs for page UTILS_MSSimulator... Generating docs for page UTILS_MSstatsConverter... Generating docs for page UTILS_MultiplexResolver... Generating docs for page UTILS_MzMLSplitter... Generating docs for page UTILS_NovorAdapter... Generating docs for page UTILS_NucleicAcidSearchEngine... Generating docs for page UTILS_OpenMSDatabasesInfo... Generating docs for page UTILS_OpenSwathDIAPreScoring... Generating docs for page UTILS_OpenSwathFileSplitter... Generating docs for page UTILS_OpenSwathMzMLFileCacher... Generating docs for page UTILS_OpenSwathRewriteToFeatureXML... Generating docs for page UTILS_OpenSwathWorkflow... Generating docs for page UTILS_PeakPickerIterative... Generating docs for page UTILS_ProteomicsLFQ... Generating docs for page UTILS_PSMFeatureExtractor... Generating docs for page UTILS_QCCalculator... Generating docs for page UTILS_QCEmbedder... Generating docs for page UTILS_QCExporter... Generating docs for page UTILS_QCExtractor... Generating docs for page UTILS_QCImporter... Generating docs for page UTILS_QCMerger... Generating docs for page UTILS_QCShrinker... Generating docs for page UTILS_RNADigestor... Generating docs for page UTILS_RNAMassCalculator... 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Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group PlotWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating namespace index... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 3 parallel threads... 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documentation has been successfully created." The documentation has been successfully created. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /builddir/build/BUILD/OpenMS-2.8.0/build/doc && /usr/bin/cmake -E echo "" make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' [100%] Built target doc_minimal make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-2.8.0/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/OpenMS-2.8.0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-2.8.0/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSConfig.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSTargets.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/cmake/OpenMS/OpenMSTargets-release.cmake -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/ALGO/Scoring.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataFrameWriter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/MockObjects.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionHelper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/DATAACCESS/Transitions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/OPENSWATHALGO/OpenSwathAlgoConfig.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS.so -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS.so" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/INTERFACES/DataStructures.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/INTERFACES/ISpectrumAccess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/INTERFACES/IMSDataConsumer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/ClassTest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Constants.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/EnumHelpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Exception.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Factory.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/FactoryBase.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/FuzzyStringComparator.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/GlobalExceptionHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Helpers.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Init.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/LogConfigHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/LogStream.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Macros.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/MacrosTest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/PrecisionWrapper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/ProgressLogger.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/RAIICleanup.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/SingletonRegistry.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/StreamHandler.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/Types.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/TypeAsString.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdGenerator.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdIndexer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/UniqueIdInterface.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/CONCEPT/VersionInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/BuildInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/ExternalProcess.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/File.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/FileWatcher.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/JavaInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/NetworkGetRequest.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/PythonInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/RWrapper.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/StopWatch.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/SysInfo.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/SYSTEM/UpdateCheck.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/BilinearInterpolation.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/BSpline2d.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/CubicSpline2d.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/EmgGradientDescent.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/GridSearch.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/LinearInterpolation.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/MathFunctions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/MSNumpress.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/RANSAC.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModel.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModelLinear.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/SplineBisection.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/MISC/NNLS/NNLS.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/AveragePosition.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/BasicStatistics.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/GaussFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/Histogram.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/LinearRegression.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/ROCCurve.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/Adduct.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/CalibrationData.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/ChargePair.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/Compomer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/DATASTRUCTURES/ConstRefVector.h -- Installing: 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Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/SpectraIDViewTab.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/SwathLibraryStats.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TableView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASEdge.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASMergerVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASResource.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASResources.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASScene.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASSplitterVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASToolVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASTreeView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASVertex.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPASWidget.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TOPPViewMenu.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TreeView.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TVControllerBase.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TVDIATreeTabController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TVIdentificationViewController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TVSpectraViewController.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/TVToolDiscovery.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/ListFilterDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot1DGoToDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot1DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot2DGoToDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot2DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/Plot3DPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/OpenMS/VISUAL/OpenMS_GUIConfig.h -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIFileEditor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIFileEditor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SwathWizard -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SwathWizard" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPAS -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPAS" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPView -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPView" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/BaselineFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/BaselineFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CometAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CometAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovoCID -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovoCID" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusID -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusID" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusMapNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusMapNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CruxAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CruxAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseSuitability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseSuitability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Decharger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Decharger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DTAExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DTAExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/EICExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/EICExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ExternalCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ExternalCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FalseDiscoveryRate -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FalseDiscoveryRate" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderCentroided -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderCentroided" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderIdentification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderIdentification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderIsotopeWavelet -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderIsotopeWavelet" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMetabo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMetabo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMRM -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMRM" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMultiplex -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMultiplex" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerLabeled -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerLabeled" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeled -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeled" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledKD -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledKD" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledQT -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledQT" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FidoAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FidoAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GenericWrapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GenericWrapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GNPSExport -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GNPSExport" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/HighResPrecursorMassCorrector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/HighResPrecursorMassCorrector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDConflictResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDConflictResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDPosteriorErrorProbability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDPosteriorErrorProbability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRipper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRipper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRTCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRTCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InclusionExclusionListCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InclusionExclusionListCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InternalCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InternalCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IsobaricAnalyzer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IsobaricAnalyzer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LuciphorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LuciphorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerIdentification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerIdentification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerPoseClustering -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerPoseClustering" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerSpectrum -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerSpectrum" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerTreeGuided -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerTreeGuided" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapRTTransformer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapRTTransformer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapStatistics -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapStatistics" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MaRaClusterAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MaRaClusterAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapterOnline -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapterOnline" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassTraceExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassTraceExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMMapper -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMMapper" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSGFPlusAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSGFPlusAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MyriMatchAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MyriMatchAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzTabExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzTabExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterGaussian -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterGaussian" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterSGolay -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterSGolay" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OMSSAAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OMSSAAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXL -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXL" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXLLF -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXLLF" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAnalyzer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAnalyzer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAssayGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAssayGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathChromatogramExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathChromatogramExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathConfidenceScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathConfidenceScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDecoyGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDecoyGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFeatureXMLToTSV -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFeatureXMLToTSV" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRTNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRTNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerHiRes -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerHiRes" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerWavelet -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerWavelet" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PepNovoAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PepNovoAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeptideIndexer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeptideIndexer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PercolatorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PercolatorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PhosphoScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PhosphoScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorIonSelector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorIonSelector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorMassCorrector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorMassCorrector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinInference -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinInference" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinQuantifier -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinQuantifier" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTModel -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTModel" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTPredict -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTPredict" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QualityControl -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QualityControl" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTModel -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTModel" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTPredict -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTPredict" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SeedListGenerator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SeedListGenerator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibSearcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibSearcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterBernNorm -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterBernNorm" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterMarkerMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterMarkerMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNLargest -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNLargest" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNormalizer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNormalizer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterParentPeakMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterParentPeakMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterScaler -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterScaler" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterSqrtMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterSqrtMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterThresholdMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterThresholdMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterWindowMower -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterWindowMower" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TextExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TextExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOFCalibration -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOFCalibration" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XFDR -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XFDR" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XTandemAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XTandemAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ExecutePipeline -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ExecutePipeline" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Resampler -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Resampler" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AccurateMassSearch -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AccurateMassSearch" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AssayGeneratorMetabo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AssayGeneratorMetabo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTraces -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTraces" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTracesByPrecursor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTracesByPrecursor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CVInspector -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CVInspector" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DecoyDatabase -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DecoyDatabase" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DeMeanderize -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DeMeanderize" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Digestor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Digestor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DigestorMotif -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DigestorMotif" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Epifany -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Epifany" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ERPairFinder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ERPairFinder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMetaboIdent -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureFinderMetaboIdent" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FFEval -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FFEval" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FuzzyDiff -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FuzzyDiff" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDDecoyProbability -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDDecoyProbability" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMassAccuracy -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMassAccuracy" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDScoreSwitcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDScoreSwitcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LabeledEval -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LabeledEval" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteAdductDecharger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteAdductDecharger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteSpectralMatcher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteSpectralMatcher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaProSIP -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaProSIP" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMPairFinder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMPairFinder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSFraggerAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSFraggerAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSSimulator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSSimulator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSstatsConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSstatsConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MultiplexResolver -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MultiplexResolver" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzMLSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzMLSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NovorAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NovorAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NucleicAcidSearchEngine -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NucleicAcidSearchEngine" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSDatabasesInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSDatabasesInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSInfo -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSInfo" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerIterative -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerIterative" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PSMFeatureExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PSMFeatureExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCEmbedder -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCEmbedder" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExtractor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExtractor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCImporter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCImporter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCMerger -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCMerger" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCShrinker -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCShrinker" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteomicsLFQ -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteomicsLFQ" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNADigestor -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNADigestor" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNAMassCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNAMassCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlXICFilter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlXICFilter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlSearch -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlSearch" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTEvaluation -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTEvaluation" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SemanticValidator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SemanticValidator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SequenceCoverageCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SequenceCoverageCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SimpleSearchEngine -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SimpleSearchEngine" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SiriusAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SiriusAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraSTSearchAdapter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraSTSearchAdapter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/StaticModification -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/StaticModification" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TICCalculator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TICCalculator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TransformationEvaluation -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TransformationEvaluation" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TriqlerConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TriqlerConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XMLValidator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XMLValidator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TargetedFileConverter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TargetedFileConverter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDIAPreScoring -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDIAPreScoring" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathMzMLFileCacher -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathMzMLFileCacher" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathWorkflow -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathWorkflow" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFileSplitter -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFileSplitter" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRewriteToFeatureXML -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRewriteToFeatureXML" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMTransitionGroupPicker -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMTransitionGroupPicker" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ImageCreator -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ImageCreator" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIUpdater -- Set runtime path of "/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIUpdater" to "$ORIGIN/../lib/" -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/structNucleicAcidSearchEngine_1_1PrecursorInfo.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/inherits.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Visual.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__TOPPView__elements.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__TOPPAS__elements.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__SpectraPreprocessers.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__SpectraFilter.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__SpectraClustering.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__SignalProcessing.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__PlotWidgets.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__PeakPicking.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__PeakMarker.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__MathFunctionsStatistics.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__MathFunctionsMisc.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Math.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__MapAlignment.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Format.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Filtering.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__FileIO.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__FeatureGrouping.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__FeatureFinder.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Dialogs.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Analysis__ID.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/group__Analysis.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/graph_legend.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/dir_c9f25c269f6c79194ec5671a83695c64.html -- Installing: /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828.html -- Installing: 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/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeled /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledKD /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledQT /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FidoAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileConverter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileFilter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileInfo /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileMerger /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FuzzyDiff /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GNPSExport /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/GenericWrapper /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/HighResPrecursorMassCorrector /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDConflictResolver /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDDecoyProbability /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDExtractor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFileConverter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDFilter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMapper /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMassAccuracy /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDMerger /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDPosteriorErrorProbability /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRTCalibration /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDRipper /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDScoreSwitcher /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IDSplitter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIFileEditor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/INIUpdater /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ImageCreator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InclusionExclusionListCreator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/InternalCalibration /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/IsobaricAnalyzer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LabeledEval /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/LuciphorAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMMapper /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMPairFinder /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MRMTransitionGroupPicker /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSFraggerAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSGFPlusAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSSimulator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MSstatsConverter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MaRaClusterAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerIdentification /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerPoseClustering /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerSpectrum /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapAlignerTreeGuided /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapNormalizer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapRTTransformer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MapStatistics /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MascotAdapterOnline /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MassTraceExtractor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaProSIP /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteAdductDecharger /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MetaboliteSpectralMatcher /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MultiplexResolver /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MyriMatchAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzMLSplitter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/MzTabExporter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterGaussian /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NoiseFilterSGolay /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NovorAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/NucleicAcidSearchEngine /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OMSSAAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSDatabasesInfo /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenMSInfo /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXL /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenPepXLLF /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAnalyzer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathAssayGenerator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathChromatogramExtractor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathConfidenceScoring /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDIAPreScoring /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathDecoyGenerator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFeatureXMLToTSV /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathFileSplitter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathMzMLFileCacher /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRTNormalizer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathRewriteToFeatureXML /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/OpenSwathWorkflow /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PSMFeatureExtractor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTModel /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTPredict /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerHiRes /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerIterative /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerWavelet /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PepNovoAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeptideIndexer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PercolatorAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PhosphoScoring /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorIonSelector /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PrecursorMassCorrector /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinInference /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinQuantifier /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteinResolver /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ProteomicsLFQ /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCEmbedder /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExporter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCExtractor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCImporter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCMerger /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QCShrinker /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/QualityControl /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNADigestor /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNAMassCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlSearch /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RNPxlXICFilter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTEvaluation /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTModel /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTPredict /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Resampler /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SeedListGenerator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SemanticValidator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SequenceCoverageCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SimpleSearchEngine /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SiriusAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibCreator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibSearcher /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterBernNorm /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterMarkerMower /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNLargest /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNormalizer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterParentPeakMower /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterScaler /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterSqrtMower /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterThresholdMower /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterWindowMower /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraMerger /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraSTSearchAdapter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/StaticModification /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SwathWizard /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TICCalculator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOFCalibration /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPAS /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPView /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TargetedFileConverter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TextExporter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TransformationEvaluation /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TriqlerConverter /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XFDR /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XMLValidator /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XTandemAdapter + patchelf --set-rpath /usr/lib64/OpenMS /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS.so /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS_GUI.so /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/icons/TOPP/pixmaps + install -pm 644 /builddir/build/SOURCES/TOPPView.png /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/icons/TOPP + install -pm 644 /builddir/build/SOURCES/TOPPAS.png /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/icons/TOPP + install -pm 644 /builddir/build/SOURCES/INIFileEditor.png /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/icons/TOPP + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications + desktop-file-install --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS TOPPAS' --set-icon=/usr/share/icons/TOPP/TOPPAS.png --set-key=StartupNotify --set-value=true --add-category=Utility --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications share/OpenMS/DESKTOP/TOPPAS.desktop + desktop-file-install --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS TOPPView %U' --set-icon=/usr/share/icons/TOPP/TOPPView.png --set-key=StartupNotify --set-value=true --add-category=Utility --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications share/OpenMS/DESKTOP/TOPPView.desktop + desktop-file-install --add-category=Utility --set-key=Exec '--set-value=env OPENMS_DATA_PATH=/usr/share/OpenMS INIFileEditor' --dir=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications /builddir/build/SOURCES/inifileeditor.desktop + mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo + install -pm 644 share/OpenMS/DESKTOP/TOPPAS.appdata.xml share/OpenMS/DESKTOP/TOPPView.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo/ + cp -a /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html html + cp -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/index.html ./ + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/html + rm -f /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc/index.html + sed -i '1 s|^#!/usr/bin/env Rscript\b|#!/usr/bin/Rscript|' /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/OpenMS/SCRIPTS/plot_trafo.R + chmod 0755 /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/OpenMS/SCRIPTS/plot_trafo.R + rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/include/thirdparty + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.8.0-0.3.fc38 --unique-debug-suffix -2.8.0-0.3.fc38.x86_64 --unique-debug-src-base openms-2.8.0-0.3.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/OpenMS-2.8.0 extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AccurateMassSearch extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/AssayGeneratorMetabo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/BaselineFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CVInspector extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTraces extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ClusterMassTracesByPrecursor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CometAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CompNovoCID extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusID extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/ConsensusMapNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/CruxAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DTAExtractor extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DatabaseSuitability extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/DeMeanderize extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Decharger extracting debug info from 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debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeled extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledKD extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FeatureLinkerUnlabeledQT extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FidoAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileFilter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileInfo extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FileMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/FuzzyDiff extracting debug info from 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debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTModel extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PTPredict extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerHiRes extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerIterative extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeakPickerWavelet extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PepNovoAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PeptideIndexer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PercolatorAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/PhosphoScoring extracting debug info from 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extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTModel extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/RTPredict extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/Resampler extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SeedListGenerator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SemanticValidator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SequenceCoverageCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SimpleSearchEngine extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SiriusAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibCreator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpecLibSearcher extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterBernNorm extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterMarkerMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNLargest extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterNormalizer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterParentPeakMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterScaler extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterSqrtMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterThresholdMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraFilterWindowMower extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraMerger extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SpectraSTSearchAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/StaticModification extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/SwathWizard extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TICCalculator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOFCalibration extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPAS extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TOPPView extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TargetedFileConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TextExporter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TransformationEvaluation extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/TriqlerConverter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XFDR extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XMLValidator extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/bin/XTandemAdapter extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS.so extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenMS_GUI.so extracting debug info from /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/lib64/OpenMS/libOpenSwathAlgo.so dwz: Allocatable section in ./usr/bin/AccurateMassSearch-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AssayGeneratorMetabo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/BaselineFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CVInspector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTraces-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTracesByPrecursor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CometAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovoCID-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusID-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusMapNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DTAExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseSuitability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DeMeanderize-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Decharger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Digestor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DigestorMotif-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ERPairFinder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Epifany-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExecutePipeline-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExternalCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderCentroided-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIdentification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIsotopeWavelet-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMRM-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetabo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetaboIdent-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMultiplex-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerLabeled-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeled-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledKD-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledQT-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FidoAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FuzzyDiff-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GNPSExport-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/HighResPrecursorMassCorrector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDConflictResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDDecoyProbability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFileConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMapper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMassAccuracy-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDPosteriorErrorProbability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRTCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRipper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDScoreSwitcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIFileEditor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ImageCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InclusionExclusionListCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InternalCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IsobaricAnalyzer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LabeledEval-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LuciphorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMMapper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMPairFinder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSFraggerAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSGFPlusAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSSimulator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSstatsConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MaRaClusterAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerIdentification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerSpectrum-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerTreeGuided-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapRTTransformer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapStatistics-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapterOnline-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassTraceExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaProSIP-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteAdductDecharger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteSpectralMatcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MultiplexResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MyriMatchAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzMLSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterGaussian-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NovorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NucleicAcidSearchEngine-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OMSSAAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSDatabasesInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXL-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXLLF-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAnalyzer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAssayGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathChromatogramExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathConfidenceScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDIAPreScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDecoyGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFeatureXMLToTSV-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFileSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathMzMLFileCacher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRewriteToFeatureXML-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathWorkflow-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTModel-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTPredict-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerHiRes-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerIterative-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PepNovoAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeptideIndexer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PercolatorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PhosphoScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorIonSelector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorMassCorrector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinInference-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinQuantifier-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteomicsLFQ-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCEmbedder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCShrinker-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QualityControl-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNADigestor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNAMassCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlXICFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTEvaluation-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTPredict-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SeedListGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SemanticValidator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SequenceCoverageCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SimpleSearchEngine-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SiriusAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibSearcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterBernNorm-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterMarkerMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNLargest-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterParentPeakMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterScaler-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterSqrtMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterThresholdMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterWindowMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraSTSearchAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/StaticModification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SvmTheoreticalSpectrumGeneratorTrainer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SwathWizard-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TICCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOFCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPAS-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPView-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TextExporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TransformationEvaluation-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TriqlerConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XFDR-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XMLValidator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XTandemAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS.so-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS_GUI.so-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AccurateMassSearch-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/AssayGeneratorMetabo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/BaselineFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CVInspector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTraces-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ClusterMassTracesByPrecursor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CometAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CompNovoCID-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusID-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ConsensusMapNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/CruxAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DTAExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DatabaseSuitability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DeMeanderize-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Decharger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DecoyDatabase-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Digestor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/DigestorMotif-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/EICExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ERPairFinder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Epifany-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExecutePipeline-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ExternalCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FFEval-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FalseDiscoveryRate-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderCentroided-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIdentification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderIsotopeWavelet-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMRM-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetabo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMetaboIdent-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureFinderMultiplex-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerLabeled-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeled-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledKD-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FeatureLinkerUnlabeledQT-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FidoAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FileMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/FuzzyDiff-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GNPSExport-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/GenericWrapper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/HighResPrecursorMassCorrector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDConflictResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDDecoyProbability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFileConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMapper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMassAccuracy-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDPosteriorErrorProbability-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRTCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDRipper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDScoreSwitcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IDSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIFileEditor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/INIUpdater-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ImageCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InclusionExclusionListCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/InternalCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/IsobaricAnalyzer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LabeledEval-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/LuciphorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMMapper-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMPairFinder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MRMTransitionGroupPicker-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSFraggerAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSGFPlusAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSSimulator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MSstatsConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MaRaClusterAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerIdentification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerPoseClustering-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerSpectrum-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapAlignerTreeGuided-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapRTTransformer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MapStatistics-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MascotAdapterOnline-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MassTraceExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaProSIP-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteAdductDecharger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MetaboliteSpectralMatcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MultiplexResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MyriMatchAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzMLSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/MzTabExporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterGaussian-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NoiseFilterSGolay-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NovorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/NucleicAcidSearchEngine-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OMSSAAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSDatabasesInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenMSInfo-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXL-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenPepXLLF-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAnalyzer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathAssayGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathChromatogramExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathConfidenceScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDIAPreScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathDecoyGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFeatureXMLToTSV-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathFileSplitter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathMzMLFileCacher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRTNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathRewriteToFeatureXML-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/OpenSwathWorkflow-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PSMFeatureExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTModel-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PTPredict-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerHiRes-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerIterative-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeakPickerWavelet-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PepNovoAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PeptideIndexer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PercolatorAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PhosphoScoring-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorIonSelector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/PrecursorMassCorrector-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinInference-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinQuantifier-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteinResolver-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/ProteomicsLFQ-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCEmbedder-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCExtractor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCImporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QCShrinker-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/QualityControl-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNADigestor-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNAMassCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlSearch-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RNPxlXICFilter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTEvaluation-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTModel-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/RTPredict-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/Resampler-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SeedListGenerator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SemanticValidator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SequenceCoverageCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SimpleSearchEngine-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SiriusAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibCreator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpecLibSearcher-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterBernNorm-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterMarkerMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNLargest-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterNormalizer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterParentPeakMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterScaler-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterSqrtMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterThresholdMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraFilterWindowMower-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraMerger-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SpectraSTSearchAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/StaticModification-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SvmTheoreticalSpectrumGeneratorTrainer-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/SwathWizard-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TICCalculator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOFCalibration-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPAS-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TOPPView-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TargetedFileConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TextExporter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TransformationEvaluation-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/TriqlerConverter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XFDR-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XMLValidator-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/bin/XTandemAdapter-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS.so-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenMS_GUI.so-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones dwz: Allocatable section in ./usr/lib64/OpenMS/libOpenSwathAlgo.so-2.8.0-0.3.fc38.x86_64.debug after non-allocatable ones original debug info size: 1188204kB, size after compression: 1200344kB /usr/bin/sepdebugcrcfix: Updated 22 CRC32s, 160 CRC32s did match. 49762 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.vanje1 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd OpenMS-2.8.0 + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo/TOPPAS.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo/TOPPView.appdata.xml /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo/TOPPAS.appdata.xml: OK /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/metainfo/TOPPView.appdata.xml: OK + desktop-file-validate /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/TOPPAS.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/TOPPView.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/inifileeditor.desktop /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/TOPPAS.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/TOPPView.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/applications/inifileeditor.desktop: hint: value "Science;Biology;Chemistry;Utility;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu + RPM_EC=0 ++ jobs -p + exit 0 Processing files: openms-2.8.0-0.3.fc38.x86_64 Provides: application() application(TOPPAS.desktop) application(TOPPView.desktop) application(inifileeditor.desktop) metainfo() metainfo(TOPPAS.appdata.xml) metainfo(TOPPView.appdata.xml) openms = 2.8.0-0.3.fc38 openms(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libCbc.so.3()(64bit) libCgl.so.1()(64bit) libCoinUtils.so.3()(64bit) libOsiClp.so.1()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5Sql.so.5()(64bit) libQt5Sql.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5WebChannel.so.5()(64bit) libQt5WebChannel.so.5(Qt_5)(64bit) libQt5WebEngineWidgets.so.5()(64bit) libQt5WebEngineWidgets.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libWm5Mathematics.so.5()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libhdf5.so.200()(64bit) libhdf5_cpp.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libsqlite3.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsvm.so.3()(64bit) libxerces-c-3.2.so()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: python2-openms < 0:2.4.0-1 python3-openms < 0:2.7.0-2 Processing files: openms-tools-2.8.0-0.3.fc38.x86_64 Provides: openms-tools = 2.8.0-0.3.fc38 openms-tools(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxerces-c-3.2.so()(64bit) rtld(GNU_HASH) Processing files: openms-devel-2.8.0-0.3.fc38.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.gXCeOz + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + cp -pr CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + cp -pr AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + cp -pr README README.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + cp -pr CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-devel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LKvd8w + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-devel + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-devel + cp -pr LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-devel + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-devel = 2.8.0-0.3.fc38 openms-devel(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-data-2.8.0-0.3.fc38.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.FD9oIB + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + cp -pr CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + cp -pr AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + cp -pr README README.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + cp -pr CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-data + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.s4AoAa + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-data + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-data + cp -pr LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-data + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-data = 2.8.0-0.3.fc38 openms-data(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/Rscript Processing files: openms-doc-2.8.0-0.3.fc38.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.mCdDPJ + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + DOCDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr CHANGELOG /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr AUTHORS /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr README README.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr html /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + cp -pr index.html /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/doc/openms-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.d63eKI + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + LICENSEDIR=/builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-doc + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-doc + cp -pr LICENSE /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64/usr/share/licenses/openms-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: openms-doc = 2.8.0-0.3.fc38 openms-doc(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-debugsource-2.8.0-0.3.fc38.x86_64 Provides: openms-debugsource = 2.8.0-0.3.fc38 openms-debugsource(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openms-debuginfo-2.8.0-0.3.fc38.x86_64 Provides: debuginfo(build-id) = 0401ccf0098431cf38cf3127dccdd548825677d9 debuginfo(build-id) = 058b8584e7345c2396e2b28ebfa099f8ed72ef1f debuginfo(build-id) = 0747541b284dacd575fd225a6a3426e36f29e46d debuginfo(build-id) = 09d05804a1b1036452e8134ac23f7e381dc05195 debuginfo(build-id) = 0aa643e41e4c0ab1a958418dde34b00b83dceeb4 debuginfo(build-id) = 0aa94f10e6d53a07fe8bd66ef230759a9eb2e4f1 debuginfo(build-id) = 0b3c8177dd0425d375b2ebb2cb216381f03eb625 debuginfo(build-id) = 0c6fb953189d40cb1e1b7a06e114b8c1de3484f1 debuginfo(build-id) = 0f2cf598f18082be052e7482a4ba1de32e491aac debuginfo(build-id) = 11ea544921297c3c07abcc4e599cf25813a3c1e8 debuginfo(build-id) = 1415e8f4cceb5f5b6d6ddd87c3831d6e4d78f64f debuginfo(build-id) = 16c4b0d545f1f310b20ef7724b44b94af1522fb2 debuginfo(build-id) = 17d200fe4be0a2b39640860c1137ac1bc3b8d32c debuginfo(build-id) = 1f999ea65f652bca08dabfcf7c424de15006d0c7 debuginfo(build-id) = 2104a5c2c088d017d6360ab82fb92e69bd2cccdd debuginfo(build-id) = 245be022ebb3dd39f9699a3d5ccf8a457f819b32 debuginfo(build-id) = 250aef9480b4713f7c81ae35afed0cc19ca6ba52 debuginfo(build-id) = 278dfa677043cca785bb5f844eb543e89044bdd5 debuginfo(build-id) = 2a22a8d61ae3888a90862eb302af5328f74896b8 debuginfo(build-id) = 2beb310265f790812cf644c2a7914faf915becc6 debuginfo(build-id) = 2c3098a34d7a5e1988b096a5ddaf06518748be8d debuginfo(build-id) = 2f00a2097afb3f17d1dbb8fada3394f079aad2b9 debuginfo(build-id) = 2f47fd8ca95990cacb90bd7438382116f002ec46 debuginfo(build-id) = 347ede73691e0fa47c97d90ab5d160f61f930bd3 debuginfo(build-id) = 384c996fe40dd2e44a9185a2c6a21320eeddd993 debuginfo(build-id) = 38dc7896529e337eac4985b2fc0d408aeea25004 debuginfo(build-id) = 39b38a271dd0119eb5de8c1b20722911600d07fb debuginfo(build-id) = 39d0dae35cd8e0372acfd4094c5fd7b26185a0e3 debuginfo(build-id) = 487107e252c722c8b0799dd34a512d5b8f5d344a debuginfo(build-id) = 4910cde6522b42615a6ba449ef1247fcb7191b83 debuginfo(build-id) = 4a995e2185ceb9848c28e763428010d5efba6955 debuginfo(build-id) = 4d09a738d343ef443e097a5009c48c379db94392 debuginfo(build-id) = 4d1016b609d8d8f5a35a732a15d0c14c07a13236 debuginfo(build-id) = 4d5dd01fe3167e28fecc2ddd3697f6474ebb26e5 debuginfo(build-id) = 4fdc9eab6d4ce24666041ea1b18ca886aeaa3794 debuginfo(build-id) = 548e1371caee1e86ddab5e3056d581cfd80d0016 debuginfo(build-id) = 5c31f7a82e5c8c8770e8bef168c951520515a141 debuginfo(build-id) = 5cb6c760352394f387ca283f87a99944ec2dac7b debuginfo(build-id) = 606d127dba9701bde14ca7bd0160ffb20cf126d0 debuginfo(build-id) = 6095d17209968f9c294489219d8e9f6daa2f0fe4 debuginfo(build-id) = 621353c86e79047f29871b5a31b6a3ec4e901b64 debuginfo(build-id) = 647f21039b1e06486bdf71d3d6408adb746f97e1 debuginfo(build-id) = 6506bd78776c9ffb9cdc1b4547b669ba91c2982d debuginfo(build-id) = 65ba3317910e0a252f86c4bc5aa72f9428cdeabb debuginfo(build-id) = 6d2795408587d4541e3810e83a580e8b1b1a5407 debuginfo(build-id) = 6dcd467b20d84717fda65d234257f3adf2d0dfb2 debuginfo(build-id) = 721b30d2814ac795adcff01376974395e56fc93c debuginfo(build-id) = 73afd845ca050d819366b48153b817e06af9ea8f debuginfo(build-id) = 73b6a519abdf2c439c06816e15532fc55ed3a524 debuginfo(build-id) = 77760a3f2e9964e34afbced99157a5efe2197792 debuginfo(build-id) = 79d72ef781836a64c72c8f93a2a0ce087fcd25b1 debuginfo(build-id) = 7a93673500e55134cd41a397c1ea1b8a56c0c21f debuginfo(build-id) = 7d9267854944c82c25485169ca1ed31fd22f44fd debuginfo(build-id) = 7e012893e105efe27021b5f8fa35470b4b928fd9 debuginfo(build-id) = 823f849caa4a4e6629c84d5217fda362e50768af debuginfo(build-id) = 833fd16c56a3e1133ac474be87bc3005fcf00898 debuginfo(build-id) = 87397a42f8e23602690551f9982220eba1450fd2 debuginfo(build-id) = 877312fc088f1f207180fddcdb443fe27de43800 debuginfo(build-id) = 87cef09acb607f738c3506bbad6102a21c2fd07a debuginfo(build-id) = 8863f7c831f4b9c752898b3447a3fccd4fa389fd debuginfo(build-id) = 89342cbcc7d84123e393c8e5c6c0816193df3d8f debuginfo(build-id) = 8a3d10e0ef2a3bfcf22989b6c357e238afe4721e debuginfo(build-id) = 8ce920a2b0200b72989a6c4545c468c770e530b3 debuginfo(build-id) = 90df2e30bc204fc761d319736ba8b4f804fb2d75 debuginfo(build-id) = 96251642301af4e364ff78d2a387629ff1b9d2cc debuginfo(build-id) = 9a46fb39ae2e6189271134e0788321d01356e77f debuginfo(build-id) = 9b3ff2f217fe3e0fefdff49a4eae6e29585e2fd9 debuginfo(build-id) = 9c9608e768ae487b6cf9a57fe557623b11c99c8b debuginfo(build-id) = 9dbf18f5f7cb5d10d19a87195d859477eb2e4ea1 debuginfo(build-id) = 9e243fc445bb200b6e96ba5be953a0a23f6ff3ed debuginfo(build-id) = 9ef44a7ce068cc2fffa230f1532428a9d8fa9689 debuginfo(build-id) = a062d6184a1e734c1b6563ecc9841ef3fe6a335e debuginfo(build-id) = a25fed0b1ed5bcde51205eb481939490c64da47f debuginfo(build-id) = a382f968e2933c89d689d646c0a4328386aa5b66 debuginfo(build-id) = a400a378a9cc8b7d88879c414063a4e61ed181ca debuginfo(build-id) = a59bc2be130602da0d067595a14d7428051fcdb8 debuginfo(build-id) = ad0ff513d87b2bb9994316faa84e9edb8260843b debuginfo(build-id) = aecf222d8f1cac9c574596452e4f52ba8e78df3e debuginfo(build-id) = b0ec4713629e51d36f7f7cea37b5a02b0b92c530 debuginfo(build-id) = b32f328f371c9cd3084becac23a691585ba6b319 debuginfo(build-id) = b53049e4d0ef6cbb7fc00760eb6523d328b4dde6 debuginfo(build-id) = b94f587a7586555d1286910d801d9632586f7451 debuginfo(build-id) = baafc39b3c44b70bf47d1a28f9cb6c4dfb4da1fd debuginfo(build-id) = bbbf7864fae3416334e165499c3eaa96b4a85f76 debuginfo(build-id) = bc408a85b8310dbc07dcfb52a69807ea433f1721 debuginfo(build-id) = bd40a2f4247e0da303006e5f3b53e7adb7bd8b1f debuginfo(build-id) = bd9def65435042aa7c0b84de48bf4e87ca06cf81 debuginfo(build-id) = bde23334a3696a8f586069eee753108e3a6e9940 debuginfo(build-id) = beba6d17c05f114717a0bd0c12ec0797d429700a debuginfo(build-id) = bf6499441f871d4cd5efcdd302e429f42929cb7b debuginfo(build-id) = c506d7cd84e468d838eb14d6b7971f31e9854548 debuginfo(build-id) = c5341801f760e1c8056054ef6d4aa380d0dee20f debuginfo(build-id) = c75b9a8e8d0af555a37e31685548e4b59f2ac353 debuginfo(build-id) = cadb99de6b6ae6d41bd9f1671aa0afa457ff1b2d debuginfo(build-id) = cbe1c2f61a9bea02074c581a762c6103e2e2e601 debuginfo(build-id) = ce3b10b0b1d29e383fd6829a7b6b2e76a16617e8 debuginfo(build-id) = d48e775a4d9a588508a88166056e664cef8071d0 debuginfo(build-id) = d6b6e726e54f6935ea08aed6fb31f6e1b49c5749 debuginfo(build-id) = db93ba2438c4395f7b51d1d9ab70d13f7b36b4fc debuginfo(build-id) = e28f34ed3c378cecf9cc68c20db5ba0460f53635 debuginfo(build-id) = e6389caf99d71b3837210788813406938541c8ec debuginfo(build-id) = e7950eb09d9c135a38c8f842662d9ef4073f6dd6 debuginfo(build-id) = e7b8c69fc8fe50572741e640a47008c463de8949 debuginfo(build-id) = eba38053e86f5b56d3191489e9cef8641f04c39b debuginfo(build-id) = ef11345729b45e4ed2f4dc7a4eefa3bb51ab7d14 debuginfo(build-id) = efa323935613aca4403536020f303752b313b64e debuginfo(build-id) = f422dd220c00b2865a2a022fcf0287aa4a7c14ea debuginfo(build-id) = f64b3d4a29dd1c5c37a48307a18a86a959fc07d7 debuginfo(build-id) = f6e6842e05f48e331eb3751b3d89962f9743a800 debuginfo(build-id) = fd0a599d0b978751d581bbf3b0a739c40827c2c0 openms-debuginfo = 2.8.0-0.3.fc38 openms-debuginfo(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openms-debugsource(x86-64) = 2.8.0-0.3.fc38 Processing files: openms-tools-debuginfo-2.8.0-0.3.fc38.x86_64 Provides: debuginfo(build-id) = 0094f68e5b5d3f927d125f3931bf6a840b42f195 debuginfo(build-id) = 00ab0b04e356f4004e510e32b89f35175ce7238c debuginfo(build-id) = 015ea6b9964ca7a3d02ee447bd573f66b89068d6 debuginfo(build-id) = 056906033a15917dc639cb4fddd7a45d7d8da0ce debuginfo(build-id) = 0c8cc00a7a7ae9596d162046ddc38c6e11a05392 debuginfo(build-id) = 102521dedfc8c22a235bcacf150a4707a4f5efca debuginfo(build-id) = 1087c6e41691504d9992c84c991d0372a38afc29 debuginfo(build-id) = 128a0356bc975fe1a744b66fabffca96154208ce debuginfo(build-id) = 1356592bf8edf44cd72509f5c92b12cbb9c2c94b debuginfo(build-id) = 144db71f91adf79694e69a494c25c94038d963c5 debuginfo(build-id) = 1a5f6202d7b4d9b9bdd102c3b0de866b6d9c7a67 debuginfo(build-id) = 209b69e24ee54379ddb5898d2d7aabd636c42328 debuginfo(build-id) = 21b556d3204e38ade898070c2f628f63e1072aab debuginfo(build-id) = 298f6394ac91508008d84dfbf2f4dd62cb83f340 debuginfo(build-id) = 32376f81487a21976226f8e3b2c320866167a168 debuginfo(build-id) = 32c7d1605c0bdd1536af08d47282583f758949c4 debuginfo(build-id) = 338821bbeed5b39affa031ba8e7c122ae0ae3289 debuginfo(build-id) = 355a5bf7d95dd82717c98a5535d7a4b95472d875 debuginfo(build-id) = 3c91ee53342f7ed93631ee9e215dbabaae619d5b debuginfo(build-id) = 3f42bbbaacc21a69625f389feee3482a1a3310c9 debuginfo(build-id) = 4dcc92c9532f22bc0db2b3288047814192dfed44 debuginfo(build-id) = 4e176c6baafadb2e4aee19a3e6be60604ddfbf13 debuginfo(build-id) = 526a0535993e57fbe4b342d6592e1eb22fe6f6cc debuginfo(build-id) = 54c9e603f5c7cac9a6484bb067c67198554fe176 debuginfo(build-id) = 579644b37cf3ce479424bee8453bb46762f78a4f debuginfo(build-id) = 57d1ad4956a5a1313acccff69ce722b1f5292af3 debuginfo(build-id) = 5fb0a248c78355d8dd21cd3c09fb655ddd266880 debuginfo(build-id) = 65d82755fae66530747ff88bfa8ecadb3cd4e296 debuginfo(build-id) = 683b309b23348da0c7559a53fb54e05eef8dad1a debuginfo(build-id) = 68e1d4b2ca951632a6e8d01e01693a445f40781f debuginfo(build-id) = 697a0507a2423e6011ec7419203091461cc8ed4d debuginfo(build-id) = 6d45175967f6cc322334b432b8aa78c290d19192 debuginfo(build-id) = 6e892cbfcc7a4c7864061ea5867f490227d1f8d1 debuginfo(build-id) = 6e8d4b6e9c97ce9ac4c40af257397a3d899c86e5 debuginfo(build-id) = 70c0514f1be28a7b567b0b1218a65aa6ba774bae debuginfo(build-id) = 721b30d2814ac795adcff01376974395e56fc93c debuginfo(build-id) = 73aa8cc34ad83fb59233f4c170723a6e04bf0463 debuginfo(build-id) = 77760a3f2e9964e34afbced99157a5efe2197792 debuginfo(build-id) = 7901e991faf76c49e2400d1863a1afa330e1e095 debuginfo(build-id) = 799f47b701f9185bbaf66e1852f86927b7477a73 debuginfo(build-id) = 7a6035d5bc5d0c9bfc5949f737014c33ff0f2823 debuginfo(build-id) = 7b40607c83483a8b7fb61fbd8881f66dfcfb5312 debuginfo(build-id) = 7eb455e04dde0c016688a403839ef6c1f1ec1331 debuginfo(build-id) = 82f63e84b78c3c39c03791d0cdd2b3e275de2867 debuginfo(build-id) = 8393283f11fb54d131ba974c78d9e78a0b0720c9 debuginfo(build-id) = 8d8e4837f5038f4386a42ab69798f5b9c945392c debuginfo(build-id) = 92aeb5ea25f366b0b14a2978fa2d805ce3e140a1 debuginfo(build-id) = 99026a2be4fed1166a8ecf1c6186f9aed65d35f6 debuginfo(build-id) = 9968b79c42acfb5e03f747e122bd9a5ba1e8442f debuginfo(build-id) = 9e446822d83535fb2a587f56a2e3c3079d1c0e31 debuginfo(build-id) = a4a3ad27117e95cbe9e42ee0ac32b6fe7f3e3b5b debuginfo(build-id) = be277a82011a703fdb9dc7261b5fb9538895d3c6 debuginfo(build-id) = bf0230738a239604353f51876fc29ccc01b5b635 debuginfo(build-id) = c07eef27066c4a829dfa91409e10ba2d8cf35964 debuginfo(build-id) = c107943d127a4428327ac9915cf56814e5b0e371 debuginfo(build-id) = c6a9c0d3cc24b136ef83d01e0b36d9558ea4b503 debuginfo(build-id) = ca2892d8e03b61c5b72dd6aca2de202bbbefe126 debuginfo(build-id) = cacc9b9287f9401a51ff25e7334a631fdee3bf57 debuginfo(build-id) = cc9a76201d9511ee16656215ac42661bdbe0b27e debuginfo(build-id) = cdfc3ddf60c5b232d13cb9bec44d51ab4441e7f5 debuginfo(build-id) = d713155ab68009ffe9ac14acb4b91b32109776c6 debuginfo(build-id) = d7270d7b22ced49b8081ed51584238607a7564ce debuginfo(build-id) = dbb5af3084189e88c0311fe024bb358e4f4ace45 debuginfo(build-id) = dcbd96e6edb23328ab920017ab17faef1c6cc0b9 debuginfo(build-id) = dd71eb51a911579a033104d8f709f6286b252a6a debuginfo(build-id) = e984fc100ac848874a8bd42cdb778a598a064e18 debuginfo(build-id) = eea6f3b02a35d6e46a77631d62542a089794798b debuginfo(build-id) = f54bd82971db8397f65bc75480f9957bc90e5775 debuginfo(build-id) = f55876eb88eb7bbb70af0586af247cdf59c97b30 debuginfo(build-id) = f91578d8944a01c851bf3e9a40519faaf28503b5 debuginfo(build-id) = fa283e9a6364b73f637f5fd3fc0e13f61e3a8970 debuginfo(build-id) = fabfafb873f75227b2067c0b5524864542b9353b debuginfo(build-id) = fbe8dc67b6177fc90319e580834102cd72ec0d10 debuginfo(build-id) = ffdc39875ade0bb11d61327a9af14c3d2ef3df7e openms-tools-debuginfo = 2.8.0-0.3.fc38 openms-tools-debuginfo(x86-64) = 2.8.0-0.3.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openms-debugsource(x86-64) = 2.8.0-0.3.fc38 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 Wrote: /builddir/build/RPMS/openms-tools-debuginfo-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-data-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-debugsource-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-doc-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-devel-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-tools-2.8.0-0.3.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/openms-debuginfo-2.8.0-0.3.fc38.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.XIJvg0 + umask 022 + cd /builddir/build/BUILD + cd OpenMS-2.8.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/openms-2.8.0-0.3.fc38.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.jX82xH + umask 022 + cd /builddir/build/BUILD + rm -rf OpenMS-2.8.0 OpenMS-2.8.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild openms-2.8.0-0.3.fc38.src.rpm Finish: build phase for openms-2.8.0-0.3.fc38.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1668432429.168711/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/openms-2.8.0-0.3.fc38.src.rpm) Config(child) 60 minutes 59 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool