<!– ============================================================= –> <!– MODULE: Article Authoring DTD –> <!– VERSION: ANSI/NISO JATS Version 1.0 (Z39.96-2012) –> <!– DATE: November 2013 –> <!– –> <!– ============================================================= –>
<!– ============================================================= –> <!– PUBLIC DOCUMENT TYPE DEFINITION –> <!– TYPICAL INVOCATION –> <!– “-//NLM//DTD JATS (Z39.96) Article Authoring DTD v1.1d1 20130915//EN”
Delivered as file "JATS-articleauthoring1.dtd" Available at: http://jats.nlm.nih.gov/articleauthoring/1.0/JATS-articleauthoring1.dtd -->
<!– ============================================================= –>
<!– ============================================================= –> <!– SYSTEM: Article Authoring DTD of the JATS DTD Suite –>
<!– –> <!– PURPOSE: DTD for creation of new journal articles –> <!– –> <!– The Article Authoring DTD is an application of –> <!– the ANSI/NISO Z39.96 Article Authoring Tag Set. –> <!– It is a subset of the Journal Archiving and –> <!– Interchange DTD that is optimized for the –> <!– authoring (or initial XML tagging) of journal –> <!– articles and some non-article material such as –> <!– product and book reviews. It describes both the –> <!– metadata for a journal article and the full –> <!– content of the article. –> <!– –> <!– This DTD was constructed using the modules in the –> <!– JATS DTD Suite. –> <!– –> <!– TAG SET SPONSOR –> <!– National Center for Biotechnology –> <!– Information (NCBI) –> <!– National Library of Medicine (NLM) –> <!– –> <!– CREATED FOR: –> <!– This DTD was created from the JATS DTD Suite. –> <!– Authors, digital archives, and publishers may –> <!– use the DTD as is for markup of journal –> <!– literature or related material for archiving –> <!– and transferring such material between archives –> <!– or create a custom XML DTD from the Suite for –> <!– these purposes. –> <!– –> <!– This DTD is in the public domain. An organization –> <!– that wishes to create its own DTD from the suite –> <!– may do so without permission from NLM. –> <!– –> <!– The suite has been set up to be extended using a –> <!– new DTD file and a new DTD-specific customization –> <!– module to redefine the many Parameter Entities. –> <!– Do not modify the suite directly or redistribute –> <!– modified versions of the suite. –> <!– –> <!– In the interest of maintaining consistency and –> <!– clarity for potential users, NLM requests: –> <!– –> <!– 1. If you create a DTD from the JATS DTD Suite –> <!– and intend to stay compatible with the suite, –> <!– then please include the following statement –> <!– as a comment in all of your DTD modules: –> <!– “Created from, and fully compatible with, –> <!– the ANSI/NISO Z39.96 Journal Article Tag –> <!– Suite (JATS).” –> <!– –> <!– 2. If you alter one or more modules of the suite, –> <!– then please rename your version and all its –> <!– modules to avoid any confusion with the –> <!– original suite. Also, please include the –> <!– following statement as a comment in all your –> <!– DTD modules: –> <!– “Based in part on, but not fully compatible –> <!– with, the ANSI/NISO Z39.96 Journal Article –> <!– Tag Suite (JATS).” –> <!– –> <!– ORIGINAL CREATION DATE: –> <!– June 2005 –> <!– –> <!– CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 –> <!– Working Group. Mulberry Technologies was –> <!– supported by National Center for Biotechnology –> <!– Information (NCBI), a center of the US National –> <!– Library of Medicine (NLM). –> <!– –> <!– The Article Authoring DTD is built from the –> <!– Archiving and Interchange DTD Suite. –> <!– –> <!– Suggestions for refinements and enhancements to –> <!– this DTD should be sent in email to: –> <!– jats@ncbi.nlm.nih.gov –> <!– ============================================================= –>
<!– ============================================================= –> <!– DTD VERSIONCHANGE HISTORY –> <!– ============================================================= –> <!–
Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
============================================================= NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15) ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1) NISO JATS Standing Committee met and answered the requests and suggestions from the NISO request forms. Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, RNGs and supporting documentation are available at http://jats.nlm.nih.gov/1.1/ 10. DTD Version - Updated the DTD-version attribute to "1.1d1" and the formal public identifier to the date: "v1.1d1 20130915//EN". 9. GLOBAL ATTRIBUTES - Added the new module for Common (global) attributes: %JATS-common-atts.ent;, called in before the customizations models module. 8. GLOBAL ATTRIBUTES - Added the new parameter entity %jats-common-atts; to every element in this module. This PE adds (for now) the @id attribute and the @xml:base attribute to every element, whether metadata or narrative. Since the @id in this parameter entity is optional, a second parameter entity jats-common-atts-id-required was also added. The two are kept in sync with the jats-base-atts parameter entity. This added a new attribute list to: - back - body - front ============================================================= NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx) ANSI/NISO Z39.96-2012 (Version 1.0) Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, RNGs and supporting documentation are available at http://jats.nlm.nih.gov/1.0/ 7. Fixed content models that were stated as "P*" and "sec*" to use the %just-para.class; and %sec.class; classes. Element models that were changed include: - back ============================================================= Version 0.4 (DAL/BTU) v0.4 (2011-01-31) This Tag Set is in the process of becoming a NISO standard. The version numbers are starting over from 0.4", as a Trial Use Draft, to be made into "Version 1.0" when the Tag Suite becomes a NISO standard. Thus, the version number that would have been "NLM Version 3.1 Draft" has become NISO JATS "Version 0.4". Details on NISO Trial Use Draft Version 0.4 are available at http://jats.nlm.nih.gov/JATS-0.4. 6. Updated the DTD-version attribute to "0.4" 5. Updated the public identifier to "v0.4 20110131", modified the formal public identifier to include "JATS (Z39.96)", and the filename as delivered to include "JATS" and the new version number "0". http://jats.nlm.nih.gov/0.4. 4. XML:LANG - Added @xml:lang to the following elements: Added to facilitate multiple languages. - article 3. LANGUAGE CODES - Codes for languages as well as variants, transliterations, regions, scripts, and combinations such as "Jpan"(Han + Hiragana + Katakana). These values should be taken from RFC 5646/W3C/IANA Subtag Registry recommendations and can be found online at: http://www.iana.org/assignments/language-subtag-registry ============================================================= Version 3.0 (DAL/BTU) v3.0 (2007-10-31) Version 3.0 is the first non-backward-compatible release. In addition to the usual incremental changes, some elements and attributes have been renamed and/or remodeled to better meet user needs and to increase tag set consistency. All module change histories are available through the Tag Suite web site at http://dtd.nlm.nih.gov. Details on version 3.0 are available at http://dtd.nlm.nih.gov/3.0. 2. Changed default @xml:lang from "EN" from "en" to match latest RFC 4646/W3C/IANA Subtag Registry recommendations 1. Updated public identifier to "v3.0 20080202//EN" -->
<!– ============================================================= –> <!– DESIGN CONSIDERATIONS –> <!– ============================================================= –>
<!– MODULAR DTD LIBRARY
A set of journal archiving and interchange DTD modules was written as the basis for article creation, publishing, interchange, and repository DTDs, with the intention that DTDs for specific purposes, such as this Authoring DTD, would be developed based on them. This Authoring DTD has been optimized for the creation of new journal articles by individual authors. This means that it lacks all the journal-related material (such as the journal metadata) that are not the responsibility of the author but of the publisher. This DTD is also smaller (fewer elements and fewer choices in many contexts) than either the Publishing or Archiving DTDs. It was not the intention to limit the expressive power licensed by the DTD, but rather to limit the many paths where there are several ways to tag the same material, where an archiving or publishing DTD needs to be able to accept all styles. -->
<!– ============================================================= –> <!– MODULE OF MODULES INVOKED –> <!– ============================================================= –>
<!– MODULE TO NAME DTD-SPECIFIC MODULES –> <!– Names all DTD-specific external modules –> <!ENTITY % articleauthcustom-modules.ent
PUBLIC
“-//NLM//DTD JATS (Z39.96) Article Authoring DTD-Specific Modules v1.1d1 20130915//EN” “JATS-articleauthcustom-modules1.ent” > %articleauthcustom-modules.ent;
<!– MODULE TO NAME THE MODULES –> <!– Names all the external modules (except
itself and the Customization Module) that are part of the modular JATS DTD Suite library. This DTD then selects from those modules by referencing the external Parameter Entities defined in the Module of Modules. To include a set of elements (such as all the lists or the table elements) this DTD references the external Parameter Entity of the module that contains the declarations. -->
<!ENTITY % modules.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Module of Modules v1.1d1 20130915//EN” “JATS-modules1.ent” > %modules.ent;
<!– ============================================================= –> <!– SET UP COMMON (ALL ELEMENT) ATTRIBUTES –> <!– ============================================================= –>
<!– COMMON ATTRIBUTES MODULE –> <!– Set up the common attributes, those used on
nearly all elements. Must be called before the custom models module. -->
%JATS-common-atts.ent;
<!– ============================================================= –> <!– CUSTOMIZATION MODULES INVOKED –> <!– Note: These modules must be called after –> <!– all Module of Modules but before any other –> <!– modules. Unlike any other grouping, order –> <!– of these modules matters. –> <!– ============================================================= –>
<!– DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE –> <!– Names the module that holds the DTD-specific
class definitions for the Article Authoring DTD that will over-ride the Suite defaults. (Defined in %articleauthcustom-modules.ent; ) -->
%articleauthcustom-classes.ent;
<!– DEFAULT ELEMENT CLASSES MODULE –> <!– Names the module that holds the standard
class definitions for the JATS DTD Suite. -->
%default-classes.ent;
<!– DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE –> <!– Set up the Parameter Entities and element
class definitions that will be used to over-ride some element mixes in this DTD. (Defined in %articleauthcustom-modules.ent;) -->
%articleauthcustom-mixes.ent;
<!– DEFAULT MIX CUSTOMIZATIONS MODULE –> <!– Names the module that holds the standard
mix definitions for the JATS DTD Suite. -->
%default-mixes.ent;
<!– DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
MODULE -->
<!– Names the module that holds the over-rides
of content models, attribute lists, elements lists to be used in content models, and attribute values. These are DTD-specific. (Defined in %articleauthcustom-modules.ent; ) -->
%articleauthcustom-models.ent;
<!– ============================================================= –> <!– COMMON (SHARED) ELEMENTS MODULE INVOKED –> <!– ============================================================= –>
<!– COMMON (SHARED) DECLARATIONS –> <!– Declarations for elements, attributes,
entities, and Notations that are shared by more than one class module. Note: Must be called before any of the class modules. -->
%common.ent;
<!– ============================================================= –> <!– JOURNAL ARTICLE CLASS ELEMENTS (alpha) –> <!– ============================================================= –>
<!– ARTICLE METADATA ELEMENTS –> %articlemeta.ent;
<!– BACK MATTER ELEMENTS –> %backmatter.ent;
<!– DISPLAY (GRAPHICAL) ELEMENTS –> %display.ent;
<!– FORMATTING ELEMENTS –> <!– Elements that change rendition/display. –> %format.ent;
<!– FUNDING ELEMENTS –> <!– Elements that describe the sponsorship or
open access -->
%funding.ent;
<!– LINK CLASS ELEMENTS –> %link.ent;
<!– LIST CLASS ELEMENTS –> %list.ent;
<!– MATH ELEMENTS –> %math.ent;
<!– NLM CITATION ELEMENT –> %nlmcitation.ent;
<!– PARAGRAPH-LEVEL ELEMENTS –> %para.ent;
<!– PHRASE-LEVEL ELEMENTS –> %phrase.ent;
<!– BIBLIOGRAPHIC REFERENCE (CITATION)
CLASS ELEMENTS -->
%references.ent;
<!– RELATED OBJECT ELEMENT –> <!– Defines the <related-object> element to
describe a related object such as a related book or a dataset. -->
%related-object.ent;
<!– SECTION ELEMENTS –> %section.ent;
<!– ============================================================= –> <!– THE REST OF THE EXTERNAL MODULES INVOKED –> <!– ============================================================= –>
<!– MATHML SETUP MODULE –> <!– Invoke the MathML modules –> %mathmlsetup.ent;
<!– XHTML TABLE SETUP MODULE –> <!– Set up the necessary Parameter Entity values
and then invoke XHTML (HTML 4.0) table module -->
%XHTMLtablesetup.ent;
<!– SPECIAL CHARACTERS DECLARATIONS –> <!– Standard XML special character entities
used in this DTD -->
%xmlspecchars.ent;
<!– CUSTOM SPECIAL CHARACTERS DECLARATIONS –> <!– Custom special character entities created
specifically for use in this DTD Suite -->
%chars.ent;
<!– NOTATION DECLARATIONS MODULE –> %notat.ent; <!– ============================================================= –>
<!– ============================================================= –> <!– PARAMETER ENTITIES FOR ATTRIBUTE LISTS –> <!– ============================================================= –>
<!– DTD VERSION –> <!– What version of this DTD was used to make
the document instance under consideration. Note that this is a fixed value that should change every time the DTD changes versions or revisions. -->
<!ENTITY % dtd-version
"dtd-version CDATA #FIXED '1.1d1'" >
<!– ARTICLE ATTRIBUTES –> <!– Attributes for the top-level element
<article> -->
<!ENTITY % article-atts
"%jats-common-atts; article-type CDATA #IMPLIED %dtd-version; specific-use CDATA #IMPLIED xml:lang NMTOKEN 'en' %XLINK.xmlns.attrib; %MATHML.xmlns.attrib; %Schema.xmlns.attrib;" >
<!– BACK ATTRIBUTES –> <!– Attributes for the <back> element –> <!ENTITY % back-atts
"%jats-common-atts;" >
<!– BODY ATTRIBUTES –> <!– Attributes for the <body> element –> <!ENTITY % body-atts
"%jats-common-atts;" >
<!– FRONT ATTRIBUTES –> <!– Attributes for the <front> element –> <!ENTITY % front-atts
"%jats-common-atts;" >
<!– ============================================================= –> <!– JOURNAL ARTICLE ELEMENTS –> <!– ============================================================= –>
<!– ARTICLE MODEL (LIMITED) –> <!ENTITY % article-short-model
"(front, body, back?)" >
<!– ARTICLE –> <!– The complete content of a journal article.
Details at: http://jats.nlm.nih.gov/articleauthoring/tag-library/1.0/index.html?elem=article -->
<!ELEMENT article %article-short-model; > <!ATTLIST article
%article-atts; >
<!– ============================================================= –> <!– FRONT MATTER ELEMENTS –> <!– ============================================================= –>
<!– FRONT MATTER MODEL –> <!ENTITY % front-model “(article-meta)” >
<!– FRONT MATTER –> <!– The metadata concerning an article, such as
the name and issue of the journal in which it appears and the name and author(s) of the article. Details at: http://jats.nlm.nih.gov/articleauthoring/tag-library/1.0/index.html?elem=front -->
<!ELEMENT front %front-model; > <!ATTLIST front
%front-atts; >
<!– ============================================================= –> <!– BODY ELEMENTS –> <!– ============================================================= –>
<!– BODY MODEL –> <!– Content model for the Body (main textual
content) of a journal article. -->
<!ENTITY % body-model “((%para-level;)*, (%sec-level;)*)” >
<!– BODY OF THE ARTICLE –> <!– The main textual portion of the article that
conveys the content. Details at: http://jats.nlm.nih.gov/articleauthoring/tag-library/1.0/index.html?elem=body -->
<!ELEMENT body %body-model; > <!ATTLIST body
%body-atts; >
<!– ============================================================= –> <!– BACK MATTER ELEMENTS –> <!– ============================================================= –>
<!– BACK MATTER MODEL –> <!– Content model for the Back Matter (ancillary
material such as appendices) of a journal article. -->
<!ENTITY % back-model “(ack?, glossary?, (%ref-list.class;)*,
app-group?)" >
<!– BACK MATTER –> <!– Ancillary or supporting material not included
as part of the main textual content of a journal article, for example appendices and acknowledgments. Details at: http://jats.nlm.nih.gov/articleauthoring/tag-library/1.0/index.html?elem=back -->
<!ELEMENT back %back-model; > <!ATTLIST back
%back-atts; >
<!– ================== End Article Authoring DTD ================ –>