<!– ============================================================= –> <!– MODULE: Subject Phrase Class Elements –> <!– VERSION: ANSI/NISO JATS Version 1.2d2 (Z39.96-2015) –> <!– DATE: December 2017 –> <!– –> <!– ============================================================= –>

<!– ============================================================= –> <!– PUBLIC DOCUMENT TYPE DEFINITION –> <!– TYPICAL INVOCATION –> <!– “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Subject Phrase Class Elements v1.2d2 20180401//EN”

Delivered as file "JATS-phrase1.ent"                          -->

<!– ============================================================= –>

<!– ============================================================= –> <!– SYSTEM: JATS DTD Suite –> <!– –> <!– PURPOSE: Defines the phrase.class, that is, names the –> <!– inline, subject-specific elements –> <!– –> <!– If more specific subject words (such as “gene”) –> <!– are added to later version of this DTD, they –> <!– should be added to the %phrase.class; entity and –> <!– defined in this module or in %common.ent; –> <!– –> <!– TAG SET SPONSOR –> <!– National Center for Biotechnology –> <!– Information (NCBI) –> <!– National Library of Medicine (NLM) –> <!– –> <!– CREATED FOR: –> <!– This module was created for the JATS DTD Suite. –> <!– Digital archives and publishers may use the –> <!– DTD as is for markup of journal literature or –> <!– related material for archiving and transferring –> <!– such material between archives or create a –> <!– custom XML DTD from the Suite for –> <!– these purposes. –> <!– –> <!– This DTD is in the public domain. An organization –> <!– that wishes to create its own DTD from the suite –> <!– may do so without permission from NLM. –> <!– –> <!– The suite has been set up to be extended using a –> <!– new DTD file and a new DTD-specific customization –> <!– module to redefine the many Parameter Entities. –> <!– Do not modify the suite directly or redistribute –> <!– modified versions of the suite. –> <!– –> <!– In the interest of maintaining consistency and –> <!– clarity for potential users, NLM requests: –> <!– –> <!– 1. If you create a DTD from the JATS DTD Suite –> <!– and intend to stay compatible with the suite, –> <!– then please include the following statement –> <!– as a comment in all of your DTD modules: –> <!– “Created from, and fully compatible with, –> <!– the ANSI/NISO Z39.96 Journal Article Tag –> <!– Suite (JATS).” –> <!– –> <!– 2. If you alter one or more modules of the suite, –> <!– then please rename your version and all its –> <!– modules to avoid any confusion with the –> <!– original suite. Also, please include the –> <!– following statement as a comment in all your –> <!– DTD modules: –> <!– “Based in part on, but not fully compatible –> <!– with, the ANSI/NISO Z39.96 Journal Article –> <!– Tag Suite (JATS).” –> <!– –> <!– Suggestions for refinements and enhancements to –> <!– the DTD suite should be sent in email to: –> <!– jats@ncbi.nlm.nih.gov –> <!– –> <!– ORIGINAL CREATION DATE: –> <!– December 2002 –> <!– –> <!– CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 –> <!– Working Group. Mulberry Technologies was –> <!– supported by National Center for Biotechnology –> <!– Information (NCBI), a center of the US National –> <!– Library of Medicine (NLM). –> <!– –> <!– This module is part of the JATS DTD Suite. The –> <!– Suite is a continuation of work done by NCBI, –> <!– Mulberry Technologies, and Inera Inc. on the NLM –> <!– Journal Archiving and Interchange DTD Suite, which–> <!– was originally released in December, 2002. –> <!– –> <!– NLM thanks the Harvard University Libraries, both –> <!– for proposing that a draft archiving NLM DTD for –> <!– life sciences journals be extended to accommodate –> <!– journals in all disciplines and for sponsoring –> <!– Inera Inc.‘s collaboration with other DTD –> <!– authors in completing NLM Version 1.0. The –> <!– Andrew W. Mellon Foundation provided support for –> <!– these important contributions. –> <!– –> <!– Suggestions for refinements and enhancements to –> <!– this DTD should be sent in email to: –> <!– jats@ncbi.nlm.nih.gov –> <!– ============================================================= –>

<!– ============================================================= –> <!– DTD VERSION/CHANGE HISTORY –> <!– ============================================================= –> <!– Version Reason/Occasion (who) vx.x (yyyy-mm-dd)

   =============================================================
    BITS Version 2.1                (DAL/BTU) v2.1    (2018-04-01)
    JATS Version 1.2d2              (DAL/BTU) v1.2d2  (2018-04-01)

    JATS is a continuing maintenance NISO Standard, which
    requires voting by the ANSI and NISO memberships to be changed. 
    BITS is under continuous maintenance, and is modified at the
    discretion of the working group.

    This draft DTD represents an interim version of the
    non-normative JATS DTD Suite, as an indication to JATS users
    the decisions that have been made by the JATS Standing
    Committee. This draft has not yet been given public review 
    or voting. The formal public identifiers were changed in the 
    modules and the catalogs.

18. BITS "2.0" and "v2.0 20151225" became
    BITS "2.1" and "v2.1 20180401". 

    JATS "1.2d1" and "v1.2d1 20171231" became
    JATS "1.2d2" and "v1.2d2 20180401". 

    No module names were changed.

   =============================================================
    JATS Version 1.2d1 (ANSI/NISO Z39.96-2015)
                                  (DAL/BTU) v1.2d1  (2017-12-31)

    NISO JATS is a continuing maintenance NISO Standard, which
    requires voting by the ANSI and NISO memberships to be changed. 

    This draft DTD represents an interim version of the
    non-normative JATS DTD Suite, as an indication to JATS users
    the decisions that have been made by the JATS Standing
    Committee. This draft has not yet been given public review 
    or voting. The formal public identifiers were changed in the 
    modules and the catalogs.

17. JATS "1.2d1" and "v1.2d1 20170631" became
    JATS "1.2d1" and "v1.2d1 20171231". 

   =============================================================
    JATS Version 1.2d1              (DAL/BTU) v1.2d1  (2017-06-31)

    NISO JATS is a continuing maintenance NISO Standard, which
    requires voting by the ANSI and NISO memberships to be changed. 

    This draft DTD represents an interim version of the
    non-normative JATS DTD Suite, as an indication to JATS users
    the decisions that have been made by the JATS Standing
    Committee. This draft has not yet been given public review 
    or voting. The formal public identifiers were changed in the 
    modules and the catalogs.

16. STYLED CONTENT - Added new @style-detail attributes to
    <styled-content>, to account for dots, sesamis, and
    other non-western emphasis.

15. VOCABULARY/TAXONOMY ATTRIBUTES - Added 4 new attributes for
    naming (and possibly linking to) a general or controlled
    taxonomy, vocabulary, index, database or other source of
    terms: @vocab, @vocab-identifier, @vocab-term, and
    @vocab-term-identifier
     - All 4 added to <named-content>, to name a vocabulary 
       as the source of the content being identified

14. JATS became version "1.2d1" and "v1.2d1 20170631" 

    =============================================================
    JATS Version 1.1                (DAL/BTU) v1.1  (2015-12-15)

    JATS is a continuing maintenance NISO Standard, which
    requires voting by the ANSI and NISO memberships to be changed. 
    JATS 1.1 was approved in late 2015, so the formal public 
    identifiers were changed in the modules and the catalogs.
    No model or attribute changes were made at this time. 

13. JATS became version "1.1" and "v1.1 20151215"

    =============================================================
    JATS Version 1.1d3             (DAL/BTU) v1.1d3  (2015-03-01)

    The changes in this release are in response to NISO 
    License and Indicators Recommended Practice.

    NISO JATS is a continuing maintenance NISO Standard, which 
    requires voting by the NISO membership to be changed. This
    Committee Draft 1.1d3 will be sent to the NISO voting
    membership, to become (if approved) NISO JATS 1.1.

    This draft DTD represents an interim version of the
    non-normative JATS DTD Suite, as an indication to JATS users
    the decisions that have been made by the JATS Standing
    Committee.

12. JATS became version "1.1d3" and "v1.1 20150301//EN"

    =============================================================
    JATS Version 1.1d2              (DAL/BTU) v1.1d2 (2014-09-30)

    NISO JATS is a continuing maintenance NISO Standard, which 
    requires voting by the NISO membership to be changed. This
    Committee Draft 1.1d2 will be sent to the NISO voting
    membership, to become (if approved) NISO JATS 1.1.

    This catalog represents an interim version of the
    non-normative JATS DTD Suite, as an indication to JATS users
    the decisions that have been made by the JATS Standing
    Committee.

11. JATS became version "1.1d2" and "v1.1d2 20140930//EN"

    =============================================================
    NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)

    ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1) 

    NISO JATS Standing Committee met and answered the requests and
    suggestions from the NISO request forms.

    Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
    XSDs, RNGs and supporting documentation are available at
          http://jats.nlm.nih.gov/1.0/

10. GLOBAL ATTRIBUTES - Added the new parameter entity 
        %jats-common-atts;
    to every element in this module. This PE adds (for now) the
    @id attribute and the @xml:base attribute to every element,
    whether metadata or narrative.
    Since the @id in this parameter entity is optional, a second
    parameter entity jats-common-atts-id-required was also added.
    The two are kept in sync with the jats-base-atts parameter 
    entity.

    =============================================================
    NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)

    ANSI/NISO Z39.96-2012 (Version 1.0) 

    Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
    XSDs, RNGs and supporting documentation are available at
          http://jats.nlm.nih.gov/1.0/

 9. NAMED CONTENT ATTRIBUTE - Added @rid to the attributes of
    <named-content>.

 8. Updated the DTD-version attribute to "1.0" and the formal
    public identifier to the date: "v1.0 20120330//EN".

    =============================================================
    Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)

    This Tag Set is in the process of becoming a NISO standard.
    The version numbers are starting over from 0.4", as a Trial
    Use Draft, to be made into "Version 1.0" when the Tag Suite 
    becomes a NISO standard. Thus, the version number that would
    have been "NLM Version 3.1 Draft" has become NISO JATS
    "Version 0.4".

    Details on NISO Trial Use Draft Version 0.4 are available at
          http://jats.nlm.nih.gov/JATS-0.4.

 7. Updated the DTD-version attribute to "0.4" 

 6. Updated the public identifier to "v0.4 20110131", 
    modified the formal public identifier to include "JATS (Z39.96)",
    and the filename as delivered to include "JATS" and the
    new version number "0".

 5. MILESTONE END ATTRIBUTES - The new parameter entity
    %milestone-end-atts; now uses %milestone-atts;, as it used to,
    for compatibility purposes. This had not been done.

 4. ACCESSIBILITY- Added @alt to
    - <abbrev> through %abbrev-atts;
    - <named-content> through %named-content-atts;
    - <styled-content> through %styled-content-atts:

 3. @SPECIFIC-USE and @XML:LANG - Added the @specific-use and
    @xml:lang to the following elements:
     - abbrev through abbrev-atts (both)
     - milestone-start through milestone-atts (@xml:lang only;
          @specific-use already)
     - milestone-end through milestone-end-atts (both)
     - named-content through named-content-atts (@xml:lang only;
          @specific-use already)
     - styled-content through styled-content-atts (@xml:lang only;
          @specific-use already)

 2. MILESTONE - The attribute list for <milestone-start> was
    named milestone-atts not milestone-start-atts. Added the
    new PE milestone-start-atts, but set it to the value of
    milestone-atts so as not to break customizations.

    =============================================================
    Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)

    Version 3.0 is the first non-backward-compatible release.
    In addition to the usual incremental changes, some
    elements and attributes have been renamed and/or remodeled
    to better meet user needs and to increase tag set consistency.
    All module change histories are available through the Tag Suite
    web site at http://dtd.nlm.nih.gov.

    Details on version 3.0 are available at
          http://dtd.nlm.nih.gov/3.0.

 1. Updated public identifier to "v3.0 20080202//EN"              -->

<!– ============================================================= –> <!– Details concerning

ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs, 
RNGs and supporting documentation are available at
      http://jats.nlm.nih.gov/1.1/                            -->

<!– ============================================================= –> <!– PARAMETER ENTITIES FOR ATTRIBUTE LISTS –> <!– ============================================================= –>

<!– ABBREVIATION ATTRIBUTES –> <!– Attributes for the <abbrev> element –> <!ENTITY % abbrev-atts

"%jats-common-atts;                                       
 content-type
            CDATA                             #IMPLIED
 specific-use
            CDATA                             #IMPLIED
 alt        CDATA                             #IMPLIED
 xml:lang   NMTOKEN                           #IMPLIED
 %might-link-atts;"                                      >

<!– MILESTONE ATTRIBUTES –> <!– Attributes for both the <milestone-start>

and <milestone-end> elements               -->

<!ENTITY % milestone-atts

"%jats-common-atts;                                       
 rid        IDREF                             #IMPLIED
 content-type
            CDATA                             #IMPLIED
 rationale  CDATA                             #IMPLIED
 specific-use
            CDATA                             #IMPLIED
 xml:lang   NMTOKEN                           #IMPLIED"  >

<!– MILESTONE START ATTRIBUTES –> <!– Attributes for the <milestone-start>

element                                    -->

<!ENTITY % milestone-start-atts

"%milestone-atts;"                                       >

<!– MILESTONE END ATTRIBUTES –> <!– Attributes for the <milestone-end>

element                                    -->

<!ENTITY % milestone-end-atts

"%milestone-atts;"                                       >

<!– NAMED CONTENT ATTRIBUTES –> <!– Attributes for the <named-content> element –> <!ENTITY % named-content-atts

"%jats-common-atts;                                       
 rid        IDREFS                            #IMPLIED
 alt        CDATA                             #IMPLIED
 content-type
            CDATA                             #REQUIRED
 vocab      CDATA                             #IMPLIED
 vocab-identifier
            CDATA                             #IMPLIED
 vocab-term CDATA                             #IMPLIED
 vocab-term-identifier
            CDATA                             #IMPLIED
 specific-use
            CDATA                             #IMPLIED
 xml:lang   NMTOKEN                           #IMPLIED
 %might-link-atts;"                                      >

<!– STYLED CONTENT ATTRIBUTES –> <!– Attributes for the <styled-content> element–> <!ENTITY % styled-content-atts

"%jats-common-atts; 
 toggle     (yes | no)                        #IMPLIED
 style      CDATA                             #IMPLIED
 style-type CDATA                             #IMPLIED
 style-detail
            CDATA                             #IMPLIED
 alt        CDATA                             #IMPLIED
 specific-use
            CDATA                             #IMPLIED
 xml:lang   NMTOKEN                           #IMPLIED"  >

<!– ============================================================= –> <!– PHRASE-LEVEL ELEMENTS –> <!– ============================================================= –>

<!– ABBREVIATION ELEMENTS –> <!– Elements for use in the <abbrev> element –> <!ENTITY % abbrev-elements

"| %def.class;"                              >

<!– ABBREVIATION OR ACRONYM –> <!– Used to identify an abbreviation or acronym

Details at:
http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=abbrev
http://jats.nlm.nih.gov/publishing/tag-library/1.2d2/index.html?elem=abbrev
http://jats.nlm.nih.gov/articleauthoring/tag-library/1.2d2/index.html?elem=abbrev
                                           -->

<!ELEMENT abbrev (PCDATA %abbrev-elements;)* > <!ATTLIST abbrev

%abbrev-atts;                                           >

<!– ============================================================= –> <!– MILESTONE ELEMENTS –> <!– ============================================================= –>

<!– MILESTONE MODEL –> <!– Model for both the <milestone-start> and

<milestone-end> elements                   -->

<!ENTITY % milestone-model

"EMPTY"                                      >

<!– MILESTONE START MODEL –> <!– Model for the both the <milestone-start>

element                                    -->

<!ENTITY % milestone-start-model

"%milestone-model;"                          >

<!– MILESTONE START –> <!– Used to mark the start of a non-hierarchically

nested object, that is, a textual component
which cannot be expressed in the normal
non-overlapping, OCHO structure of an XML
document. When this element is used, it is
assumed that the end of the textual
component will be marked with a
<milestone-end> element.
Details at:
http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=milestone-start
http://jats.nlm.nih.gov/publishing/tag-library/1.2d2/index.html?elem=milestone-start
                                           -->

<!ELEMENT milestone-start

%milestone-start-model;                      >

<!ATTLIST milestone-start

%milestone-start-atts;                                  >

<!– MILESTONE END MODEL –> <!– Model for the both the <milestone-end>

element                                    -->

<!ENTITY % milestone-end-model

"%milestone-model;"                          >

<!– MILESTONE END –> <!– Used to mark the end of a non-hierarchically

nested object, that is, a textual component
which cannot be expressed in the normal
non-overlapping, OCHO structure of an XML
document. When this element is used, it is
assumed that the start of the textual
component was marked with a <milestone-start>
element.
Details at:
http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=milestone-end
http://jats.nlm.nih.gov/publishing/tag-library/1.2d2/index.html?elem=milestone-end
                                           -->

<!ELEMENT milestone-end

%milestone-end-model;                        >

<!ATTLIST milestone-end

%milestone-end-atts;                                    >

<!– ============================================================= –> <!– NAMED CONTENT ELEMENTS –> <!– ============================================================= –>

<!– NAMED CONTENT ELEMENTS –> <!– The elements that can be included along with

data characters inside the content model of
the <named-content> element                -->

<!ENTITY % named-content-elements

"| %address-link.class; |
 %article-link.class; |
 %block-display.class; | %block-math.class;|
 %emphasis.class;  |
 %inline-display-noalt.class; |
 %inline-math.class; | %list.class; |
 %math.class; | %phrase.class; |
 %simple-link.class; |
 %subsup.class; | %rest-of-para.class;"      >

<!– NAMED SPECIAL (SUBJECT) CONTENT –> <!– A semantically distinct word or phrase

within the text. Often such phrases are
treated differently, for example, given a
different typographic style or look, to call
attention to the subject matter. For
example, the word is a drug name or a
gene or the phrase identifies an organism
genus/species.
Details at:
http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=named-content
http://jats.nlm.nih.gov/publishing/tag-library/1.2d2/index.html?elem=named-content
http://jats.nlm.nih.gov/articleauthoring/tag-library/1.2d2/index.html?elem=named-content
                                           -->

<!ELEMENT named-content

(#PCDATA %named-content-elements;)*          >

<!ATTLIST named-content

%named-content-atts;                                    >

<!– ============================================================= –> <!– STYLED CONTENT ELEMENTS –> <!– ============================================================= –>

<!– STYLED CONTENT ELEMENTS –> <!– The elements that can be included along with

data characters inside the content model of
the <styled-content> element               -->

<!ENTITY % styled-content-elements

"| %address-link.class; |
 %article-link.class; |
 %block-display.class; | %block-math.class;|
 %emphasis.class; |
 %inline-display-noalt.class; |
 %inline-math.class; | %list.class; |
 %math.class; | %phrase.class; |
 %simple-link.class; |
 %subsup.class; | %rest-of-para.class;"      >

<!– STYLED SPECIAL (SUBJECT) CONTENT –> <!– A stylistically distinct word or phrase

within the text, that cannot be tagged using
any of the other mechanisms for such content.
In other words: the content cannot be
described with bold, italic, monospace or any
of the other emphasis class elements and
<named-content> is inappropriate because the
semantic reason behind the typographic
distinction is not clear.
Details at:
http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=styled-content
http://jats.nlm.nih.gov/publishing/tag-library/1.2d2/index.html?elem=styled-content
http://jats.nlm.nih.gov/articleauthoring/tag-library/1.2d2/index.html?elem=styled-content
                                           -->

<!ELEMENT styled-content

(#PCDATA %styled-content-elements;)*         >

<!ATTLIST styled-content

%styled-content-atts;                                   >

<!– ================== End Phrase Class Module ================== –>