<!– ============================================================= –> <!– MODULE: JATS DTD Suite Module of Modules –> <!– VERSION: ANSI/NISO JATS Version 1.2d1 (Z39.96-2015) –> <!– DATE: June 2017 –> <!– –> <!– ============================================================= –>

<!– ============================================================= –> <!– PUBLIC DOCUMENT TYPE DEFINITION –> <!– TYPICAL INVOCATION –> <!– “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Module of Modules v1.2d1 20170631//EN”

Delivered as file "JATS-modules1.ent"                         -->

<!– ============================================================= –>

<!– ============================================================= –> <!– SYSTEM: JATS DTD Suite –> <!– –> <!– PURPOSE: For naming all the external modules (except –> <!– this module itself and the customization modules) –> <!– that are part of the JATS DTD Suite. A specific –> <!– DTD will select from these modules by referencing –> <!– the external Parameter Entities defined below that–> <!– name the modules of the suite. To include a set –> <!– of elements (such as all the lists or the MathML –> <!– elements), reference the external Parameter Entity–> <!– of the module that contains these declarations, –> <!– then modify the classes or content models to use –> <!– the new elements. –> <!– –> <!– CONTAINS: Entity declarations and public names for all the –> <!– JATS DTD Suite external modules. Note: The modules–> <!– are NOT referenced (called/invoked) in this –> <!– module, they are merely DECLARED. The DTD or –> <!– a setup module (such as for the XHTML tables) –> <!– will invoke the external parameter entity to –> <!– call each module. –> <!– –> <!– TAG SET SPONSOR –> <!– National Center for Biotechnology –> <!– Information (NCBI) –> <!– National Library of Medicine (NLM) –> <!– –> <!– CREATED FOR: –> <!– This module was created for the JATS DTD Suite. –> <!– Digital archives and publishers may use the –> <!– DTD as is for markup of journal literature or –> <!– related material for archiving and transferring –> <!– such material between archives or create a –> <!– custom XML DTD from the Suite for –> <!– these purposes. –> <!– –> <!– This DTD is in the public domain. An organization –> <!– that wishes to create its own DTD from the suite –> <!– may do so without permission from NLM. –> <!– –> <!– The suite has been set up to be extended using a –> <!– new DTD file and a new DTD-specific customization –> <!– module to redefine the many Parameter Entities. –> <!– Do not modify the suite directly or redistribute –> <!– modified versions of the suite. –> <!– –> <!– In the interest of maintaining consistency and –> <!– clarity for potential users, NLM requests: –> <!– –> <!– 1. If you create a DTD from the JATS DTD Suite –> <!– and intend to stay compatible with the suite, –> <!– then please include the following statement –> <!– as a comment in all of your DTD modules: –> <!– “Created from, and fully compatible with, –> <!– the ANSI/NISO Z39.96 Journal Article Tag –> <!– Suite (JATS).” –> <!– –> <!– 2. If you alter one or more modules of the suite, –> <!– then please rename your version and all its –> <!– modules to avoid any confusion with the –> <!– original suite. Also, please include the –> <!– following statement as a comment in all your –> <!– DTD modules: –> <!– “Based in part on, but not fully compatible –> <!– with, the ANSI/NISO Z39.96 Journal Article –> <!– Tag Suite (JATS).” –> <!– –> <!– ORIGINAL CREATION DATE: –> <!– December 2002 –> <!– –> <!– CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 –> <!– Working Group. Mulberry Technologies was –> <!– supported by National Center for Biotechnology –> <!– Information (NCBI), a center of the US National –> <!– Library of Medicine (NLM). –> <!– –> <!– This module is part of the JATS DTD Suite. The –> <!– Suite is a continuation of work done by NCBI, –> <!– Mulberry Technologies, and Inera Inc. on the NLM –> <!– Journal Archiving and Interchange DTD Suite, which–> <!– was originally released in December, 2002. –> <!– –> <!– NLM thanks the Harvard University Libraries, both –> <!– for proposing that a draft archiving NLM DTD for –> <!– life sciences journals be extended to accommodate –> <!– journals in all disciplines and for sponsoring –> <!– Inera Inc.‘s collaboration with other DTD –> <!– authors in completing NLM Version 1.0. The –> <!– Andrew W. Mellon Foundation provided support for –> <!– these important contributions. –> <!– –> <!– Suggestions for refinements and enhancements to –> <!– this DTD should be sent in email to: –> <!– jats@ncbi.nlm.nih.gov –> <!– ============================================================= –>

<!– ============================================================= –> <!– DTD VERSION/CHANGE HISTORY –> <!– ============================================================= –> <!– Version Reason/Occasion (who) vx.x (yyyy-mm-dd)

  =============================================================
   JATS Version 1.2d1              (DAL/BTU) v1.2d1  (2017-06-31)
   NISO JATS is a continuing maintenance NISO Standard, which
   requires voting by the ANSI and NISO memberships to be changed. 
   This draft DTD represents an interim version of the
   non-normative JATS DTD Suite, as an indication to JATS users
   the decisions that have been made by the JATS Standing
   Committee. This draft has not yet been given public review 
   or voting. The formal public identifiers were changed in the 
   modules and the catalogs.
9. JATS became version "1.2d1" and "v1.1d2 20170631" 
   =============================================================
   JATS Version 1.1                (DAL/BTU) v1.1  (2015-12-15)
   JATS is a continuing maintenance NISO Standard, which
   requires voting by the ANSI and NISO memberships to be changed. 
   JATS 1.1 was approved in late 2015, so the formal public 
   identifiers were changed in the modules and the catalogs.
   No model or attribute changes were made at this time. 
8. JATS became version "1.1" and "v1.1 20151215"
   =============================================================
   JATS Version 1.1d3             (DAL/BTU) v1.1d3  (2015-03-01)
   The changes in this release are in response to NISO 
   License and Indicators Recommended Practice.
   NISO JATS is a continuing maintenance NISO Standard, which 
   requires voting by the NISO membership to be changed. This
   Committee Draft 1.1d3 will be sent to the NISO voting
   membership, to become (if approved) NISO JATS 1.1.
   This draft DTD represents an interim version of the
   non-normative JATS DTD Suite, as an indication to JATS users
   the decisions that have been made by the JATS Standing
   Committee.
7. JATS became version "1.1d3" and "v1.1d3 20150301"
   =============================================================
   JATS Version 1.1d2              (DAL/BTU) v1.1d2 (2014-09-30)
   NISO JATS is a continuing maintenance NISO Standard, which 
   requires voting by the NISO membership to be changed. This
   Committee Draft 1.1d2 will be sent to the NISO voting
   membership, to become (if approved) NISO JATS 1.1.
   This catalog represents an interim version of the
   non-normative JATS DTD Suite, as an indication to JATS users
   the decisions that have been made by the JATS Standing
   Committee.
6. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
   =============================================================
   NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)
   ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1) 
   NISO JATS Standing Committee met and answered the requests and
   suggestions from the NISO request forms.
   Details concerning ANSI/NISO Z39.96-2012 JATS-based 
   DTDs, XSDs, RNGs and supporting documentation are available at
         http://jats.nlm.nih.gov/1.0/
   =============================================================
   NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
   ANSI/NISO Z39.96-2012 (Version 1.0) 
   Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
   XSDs, RNGs and supporting documentation are available at
         http://jats.nlm.nih.gov/1.0/
5. NLMCITATION - Added module for deprecated element <nlm-citation>
   because the element is called in a default class 
   (citation.class) that, for reasons of backwards compatibility,
   will not be changed at this time.
4. Updated the DTD-version attribute to "1.0" and the formal
   public identifier to the date: "v1.0 20120330//EN".
   =============================================================
   Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
   This Tag Set is in the process of becoming a NISO standard.
   The version numbers are starting over from 0.4", as a Trial
   Use Draft, to be made into "Version 1.0" when the Tag Suite 
   becomes a NISO standard. Thus, the version number that would
   have been "NLM Version 3.1 Draft" has become NISO JATS
   "Version 0.4".
   Details on NISO Trial Use Draft Version 0.4 are available at
         http://jats.nlm.nih.gov/JATS-0.4.
3. Updated the DTD-version attribute to "0.4" 
2. Updated the public identifier to "v0.4 20110131", 
   modified the formal public identifier to include "JATS (Z39.96)",
   and the filename as delivered to include "JATS" and the
   new version number "0".
   =============================================================
   Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)
   Version 3.0 is the first non-backward-compatible release.
   In addition to the usual incremental changes, some
   elements and attributes have been renamed and/or remodeled
   to better meet user needs and to increase tag set consistency.
   All module change histories are available through the Tag Suite
   web site at http://dtd.nlm.nih.gov.
   Details on version 3.0 are available at
         http://dtd.nlm.nih.gov/3.0.
1. Updated public identifier to "v3.0 20080202//EN"              -->

<!– ============================================================= –> <!– Details concerning

ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs, 
RNGs and supporting documentation are available at
      http://jats.nlm.nih.gov/1.1/                            -->

<!– ============================================================= –> <!– DEFAULT CLASSES AND MIXES –> <!– ============================================================= –>

<!– DEFAULT ELEMENT CLASSES MODULE –> <!– Set up the Parameter Entities and element

class definitions that will be used to
establish the content models for the
Archiving and Interchange DTD.             -->

<!ENTITY % default-classes.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) Default Element Classes Module v1.2d1 20170631//EN” “JATS-default-classes1.ent” >

<!– DEFAULT ELEMENT MIXES MODULE –> <!– Set up the Parameter Entities and element

mix definitions that will be used in
content models for the Archiving and
Interchange DTD.                           -->

<!ENTITY % default-mixes.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) Default Element Mixes Module v1.2d1 20170631//EN” “JATS-default-mixes1.ent” >

<!– ============================================================= –> <!– COMMON ATTRIBUTES SHARED BY ALL ELEMENTS –> <!– ============================================================= –>

<!– COMMON ATTRIBUTES SHARED BY ALL ELEMENTS –> <!ENTITY % JATS-common-atts.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Common Attributes (for all elements) v1.2d1 20170631//EN” “JATS-common-atts1.ent” >

<!– ============================================================= –> <!– COMMON ELEMENTS SHARED BY MANY MODULES –> <!– ============================================================= –>

<!– COMMON (SHARED) ELEMENT DECLARATIONS –> <!ENTITY % common.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Common (Shared) Elements Module v1.2d1 20170631//EN” “JATS-common1.ent” >

<!– ============================================================= –> <!– CLASS MODULES (ALPHABETICAL ORDER) –> <!– ============================================================= –>

<!– ARTICLE METADATA ELEMENTS –> <!ENTITY % articlemeta.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Journal Article Metadata Elements v1.2d1 20170631//EN” “JATS-articlemeta1.ent” >

<!– BACK MATTER ELEMENTS –> <!ENTITY % backmatter.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Back Matter Elements v1.2d1 20170631//EN” “JATS-backmatter1.ent” >

<!– DISPLAY (GRAPHICAL) ELEMENTS INVOCATION –> <!ENTITY % display.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Display Class Elements v1.2d1 20170631//EN” “JATS-display1.ent” >

<!– FORMATTING ELEMENTS –> <!– Elements that change rendition/display. This

module includes the Appearance Class, the
Break Class, and the Emphasis Class        -->

<!ENTITY % format.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Formatting Element Classes v1.2d1 20170631//EN” “JATS-format1.ent” >

<!– FUNDING ELEMENTS –> <!– Elements that model open access, grant,

sponsorship, or other funding information,
for example the grant number (<award-id>)
and the <principal-investigator>           -->

<!ENTITY % funding.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Funding Elements v1.2d1 20170631//EN” “JATS-funding1.ent” >

<!– JOURNAL METADATA ELEMENTS –> <!ENTITY % journalmeta.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Journal Metadata Elements v1.2d1 20170631//EN” “JATS-journalmeta1.ent” >

<!– LINK ELEMENTS –> <!ENTITY % link.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Link Class Elements v1.2d1 20170631//EN” “JATS-link1.ent” >

<!– LIST ELEMENTS –> <!ENTITY % list.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite List Class Elements v1.2d1 20170631//EN” “JATS-list1.ent” >

<!– MATH ELEMENTS –> <!ENTITY % math.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Math Class Elements v1.2d1 20170631//EN” “JATS-math1.ent” >

<!– PARAGRAPH-LEVEL ELEMENTS –> <!ENTITY % para.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Paragraph-Like Elements v1.2d1 20170631//EN” “JATS-para1.ent” >

<!– PHRASE-LEVEL CONTENT ELEMENTS –> <!ENTITY % phrase.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Subject Phrase Class Elements v1.2d1 20170631//EN” “JATS-phrase1.ent” >

<!– BIBLIOGRAPHY REFERENCES (CITATION) ELEMENTS–> <!ENTITY % references.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Bibliographic Reference (Citation) Class Elements v1.2d1 20170631//EN” “JATS-references1.ent” >

<!– RELATED OBJECT ELEMENT –> <!– Defines the <related-object> element to

describe a related object such as a
related book or a dataset.                 -->

<!ENTITY % related-object.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Related Object Element v1.2d1 20170631//EN” “JATS-related-object1.ent” >

<!– SECTION ELEMENTS –> <!ENTITY % section.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite Section Class Elements v1.2d1 20170631//EN” “JATS-section1.ent” >

<!– ============================================================= –> <!– TABLES: XHTML TABLE MODULES –> <!– ============================================================= –>

<!– XHTML TABLE SETUP MODULE –> <!– Set all Parameter Entities needed by the

HTML 4.0 (XHTML) table model, and then
call the module containing that model.
Authoring Note: If wanted, this module
will be invoked in the DTD module          -->

<!ENTITY % XHTMLtablesetup.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite XHTML Table Setup Module v1.2d1 20170631//EN” “JATS-XHTMLtablesetup1.ent” >

<!– XHTML TABLE MODEL –> <!– The public XML version of the XHTML 1.1

table model. This module is invoked in the
 module %XHTMLtablesetup3.ent;             -->

<!ENTITY % xhtml-table-1.mod

PUBLIC

“-//W3C//ELEMENTS XHTML Tables 1.0//EN” “xhtml-table-1.mod” >

<!– XHTML TABLE INLINE STYLE MODULE –> <!– The public XML version of the XHTML 1.1

inline style module for use in XHTML tables.
This module is invoked in the
 module %XHTMLtablesetup3.ent;             -->

<!ENTITY % xhtml-inlstyle-1.mod

PUBLIC

“-//W3C//ENTITIES XHTML Inline Style 1.0//EN” “xhtml-inlstyle-1.mod” >

<!– ============================================================= –> <!– ALI: NISO ACCESS AND INDICATORS –> <!– ============================================================= –>

<!– NISO ACCESS AND INDICATORS (RP-22-1015) –> <!– Set all Parameter Entities needed by the

NISO ALI licensing elements.
This module is invoked by each DTD.        -->

<!ENTITY % JATS-ali-namespace.ent

PUBLIC

“-//NLM//DTD JATS ALI Namespace Module v1.2d1 20170631//EN” “JATS-ali-namespace1.ent” >

<!– ============================================================= –> <!– TABLES: OASIS EXCHANGE TABLE MODULES –> <!– ============================================================= –>

<!– OASIS XML TABLE SETUP MODULE –> <!– Set all Parameter Entities needed by the

OASIS (CALS) Table Exchange table model.
Authoring Note: If wanted, this module
will be invoked in the DTD module          -->

<!ENTITY % oasis-tablesetup.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) Namespaced OASIS XML Table Setup Module v1.2d1 20170631//EN” “JATS-oasis-tablesetup1.ent” >

<!– OASIS XML TABLE MODEL –> <!– The OASIS (CALS) Table Exchange table model

This module is invoked in
%JATS-oasis-tablesetup1.ent;               -->

<!ENTITY % oasis-exchange.ent

PUBLIC

“-//OASIS//DTD XML Exchange Table Model 19990315//EN” “oasis-exchange.ent” >

<!– ============================================================= –> <!– SPECIAL CHARACTER MODULES –> <!– ============================================================= –>

<!– SPECIAL CHARACTERS DECLARATIONS –> <!– Declares any standard XML special character

entities used in this DTD                  -->

<!ENTITY % xmlspecchars.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite XML Special Characters Module v1.2d1 20170631//EN” “JATS-xmlspecchars1.ent” >

<!– CUSTOM SPECIAL CHARACTERS DECLARATIONS –> <!– Declares any custom special character

entities created for this Suite            -->

<!ENTITY % chars.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Custom Special Characters Module v1.2d1 20170631//EN” “JATS-chars1.ent” >

<!– ============================================================= –> <!– MATH: MATHML MODULES –> <!– Only one of the modules below may be –> <!– invoked by a DTD. –> <!– ============================================================= –>

<!– MATHML 2.0 SETUP MODULE –> <!– Called from the DTD to include the MathML 2.0

elements in the tag set.                   -->

<!ENTITY % mathmlsetup.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite MathML Setup Module v1.2d1 20170631//EN” “JATS-mathmlsetup1.ent” >

<!– MATHML 3.0 SETUP MODULE –> <!– Called from the DTD to include the MathML 3.0

elements in the tag set.                   -->

<!ENTITY % mathml3-mathmlsetup.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite MathML 3.0 Setup Module v1.2d1 20170631//EN” “JATS-mathml3-mathmlsetup1.ent” >

<!– ============================================================= –> <!– MATHML 2.0 MODULES (below for JATS V1) –> <!– MATHML 3.0 modules are invoked in the DTD –> <!– ============================================================= –>

<!– MATHML 2.0 QUALIFIED NAMES –> <!ENTITY % mathml-qname.mod

PUBLIC

“-//W3C//ENTITIES MathML 2.0 Qualified Names 1.0//EN” “mathml2-qname-1.mod” >

<!– MATHML 2.0 DTD –> <!ENTITY % mathml.dtd PUBLIC “-//W3C//DTD MathML 2.0//EN” “mathml2.dtd” >

<!– MATHML 2.0 EXTRA ENTITIES –> <!ENTITY % ent-mmlextra

PUBLIC

“-//W3C//ENTITIES Extra for MathML 2.0//EN” “mathml/mmlextra.ent” >

<!– MATHML 2.0 ALIASES –> <!ENTITY % ent-mmlalias

PUBLIC

“-//W3C//ENTITIES Aliases for MathML 2.0//EN” “mathml/mmlalias.ent” >

<!– ============================================================= –> <!– NOTATIONS MODULE –> <!– ============================================================= –>

<!– NOTATION DECLARATIONS MODULE –> <!– Container module for the Notation Declarations

to be used with this DTD suite.  Placed in
their own module for easy expansion or
replacement.                               -->

<!ENTITY % notat.ent PUBLIC “-//NLM//DTD JATS (Z39.96) JATS DTD Suite Notation Declarations v1.2d1 20170631//EN” “JATS-notat1.ent” >

<!– ============================================================= –> <!– NLM CITATION (DEPRECATED ELEMENT) MODULE –> <!– ============================================================= –>

<!– NLM CITATION MODULE –> <!– The only new element created for the

Publishing DTD, the highly structured NLM
citation, to enforce a slightly loose version
of an NLM-structured bibliographic reference.
Sequence is enforced and interior punctuation
is expected to be generated.               -->

<!ENTITY % nlmcitation.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) NLM Citation v1.2d1 20170631//EN” “JATS-nlmcitation1.ent” >

<!– ============================================================= –> <!– NAMESPACE FOR W3C XSI PREFIX FOR DTDS

THAT DO NOT USE MATHML                    -->

<!– ============================================================= –>

<!ENTITY % JATS-xsi-schema-namespace.ent

PUBLIC

“-//NLM//DTD JATS (Z39.96) JATS DTD Suite XSI Namespace Setup Module v1.2d1 20170631//EN” “JATS-xsi-schema-namespace1.ent” >

<!– =================== End Journal Article Module of Modules === –>