class MS::Sequest::Sqt::Match::Percolator

Public Instance Methods

negative_q_value() click to toggle source
# File lib/ms/sequest/sqt.rb, line 361
def negative_q_value
  self[5]
end
negative_q_value=(arg) click to toggle source
# File lib/ms/sequest/sqt.rb, line 364
def negative_q_value=(arg)
  self[5] = arg
end
percolator_score() click to toggle source
we will keep access to these old terms since we can then access routines
that sort on xcorr...

undef_method :xcorr undef_method :xcorr= undef_method :sp undef_method :sp=

# File lib/ms/sequest/sqt.rb, line 355
def percolator_score
  self[4]
end
percolator_score=(score) click to toggle source
# File lib/ms/sequest/sqt.rb, line 358
def percolator_score=(score)
  self[4] = score
end
probability() click to toggle source

for compatibility with scripts that want this guy

# File lib/ms/sequest/sqt.rb, line 371
def probability
  -self[5]
end
q_value() click to toggle source
# File lib/ms/sequest/sqt.rb, line 367
def q_value
  -self[5]
end