Table of Contents - bettersam-0.2.0 Documentation
Classes and Modules
Methods
- ::lib_extension — BetterSam::Library
- ::load — BetterSam::Library
- ::new — BetterSam
- #both_mapped? — BetterSam::SAMRecord
- #chrome — BetterSam::SAMRecord
- #cigar — BetterSam::SAMRecord
- #each_record — BetterSam
- #edit_distance — BetterSam::SAMRecord
- #endpos — BetterSam::SAMRecord
- #exact_match? — BetterSam::SAMRecord
- #first_in_pair? — BetterSam::SAMRecord
- #flag — BetterSam::SAMRecord
- #get_base_at — BetterSam::SAMRecord
- #mapq — BetterSam::SAMRecord
- #mate_reverse_strand? — BetterSam::SAMRecord
- #mate_unmapped? — BetterSam::SAMRecord
- #mchrom — BetterSam::SAMRecord
- #mpos — BetterSam::SAMRecord
- #name — BetterSam::SAMRecord
- #nm — BetterSam::SAMTagSet
- #pair_opposite_strands? — BetterSam::SAMRecord
- #pair_same_strand? — BetterSam::SAMRecord
- #parse_cigar — BetterSam::SAMRecord
- #parse_sam — BetterSam
- #pcr_duplicate? — BetterSam::SAMRecord
- #pnext — BetterSam::SAMRecord
- #pos — BetterSam::SAMRecord
- #primary_aln? — BetterSam::SAMRecord
- #qname — BetterSam::SAMRecord
- #qual — BetterSam::SAMRecord
- #quality_fail? — BetterSam::SAMRecord
- #read_paired? — BetterSam::SAMRecord
- #read_properly_paired? — BetterSam::SAMRecord
- #read_reverse_strand? — BetterSam::SAMRecord
- #read_unmapped? — BetterSam::SAMRecord
- #rname — BetterSam::SAMRecord
- #rnext — BetterSam::SAMRecord
- #second_in_pair? — BetterSam::SAMRecord
- #seq — BetterSam::SAMRecord
- #tags — BetterSam::SAMRecord
- #tlen — BetterSam::SAMRecord
- #xm — BetterSam::SAMTagSet